Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2958:21006
Extra
PDB:
ATOM 1 O3' C A 957 -44.337 10.725 112.416 1.00 67.24 O
ATOM 2 P G A 958 -43.402 9.685 111.605 1.00 64.06 P
ATOM 3 OP1 G A 958 -43.221 8.488 112.475 1.00 65.08 O
ATOM 4 OP2 G A 958 -42.213 10.424 111.151 1.00 63.30 O
ATOM 5 O5' G A 958 -44.281 9.301 110.357 1.00 63.62 O
ATOM 6 C5' G A 958 -45.283 8.308 110.469 1.00 64.29 C
ATOM 7 C4' G A 958 -46.035 8.151 109.188 1.00 63.77 C
ATOM 8 O4' G A 958 -46.385 9.456 108.666 1.00 63.00 O
ATOM 9 C3' G A 958 -45.263 7.500 108.069 1.00 63.27 C
ATOM 10 O3' G A 958 -45.267 6.097 108.181 1.00 63.96 O
ATOM 11 C2' G A 958 -45.989 8.012 106.838 1.00 62.53 C
ATOM 12 O2' G A 958 -47.211 7.309 106.663 1.00 63.00 O
ATOM 13 C1' G A 958 -46.319 9.441 107.260 1.00 62.23 C
ATOM 14 N9 G A 958 -45.290 10.410 106.829 1.00 61.40 N
ATOM 15 C8 G A 958 -44.286 10.887 107.610 1.00 61.44 C
ATOM 16 N7 G A 958 -43.523 11.747 106.980 1.00 60.64 N
ATOM 17 C5 G A 958 -44.073 11.869 105.714 1.00 60.05 C
ATOM 18 C6 G A 958 -43.673 12.647 104.601 1.00 59.15 C
ATOM 19 O6 G A 958 -42.731 13.419 104.481 1.00 58.66 O
ATOM 20 N1 G A 958 -44.494 12.473 103.526 1.00 58.86 N
ATOM 21 C2 G A 958 -45.571 11.653 103.503 1.00 59.36 C
ATOM 22 N2 G A 958 -46.244 11.616 102.346 1.00 59.00 N
ATOM 23 N3 G A 958 -45.949 10.914 104.517 1.00 60.19 N
ATOM 24 C4 G A 958 -45.166 11.058 105.604 1.00 60.50 C
ATOM 25 P A A 959 -43.911 5.249 108.032 1.00 63.78 P
ATOM 26 OP1 A A 959 -43.230 5.290 109.355 1.00 64.39 O
ATOM 27 OP2 A A 959 -43.181 5.754 106.832 1.00 62.77 O
ATOM 28 O5' A A 959 -44.461 3.775 107.749 1.00 64.43 O
TER
ATOM 1 O3' A B1005 -43.797 10.992 99.134 1.00 61.35 O
ATOM 2 P U B1006 -45.035 11.719 98.453 1.00 54.17 P
ATOM 3 OP1 U B1006 -44.523 12.941 97.782 1.00 53.40 O
ATOM 4 OP2 U B1006 -46.098 11.880 99.524 1.00 54.74 O
ATOM 5 O5' U B1006 -45.514 10.647 97.365 1.00 54.27 O
ATOM 6 C5' U B1006 -44.608 10.047 96.472 1.00 54.01 C
ATOM 7 C4' U B1006 -44.375 8.592 96.804 1.00 54.66 C
ATOM 8 O4' U B1006 -43.911 8.450 98.161 1.00 55.11 O
ATOM 9 C3' U B1006 -45.570 7.655 96.751 1.00 55.26 C
ATOM 10 O3' U B1006 -45.917 7.277 95.426 1.00 55.06 O
ATOM 11 C2' U B1006 -45.095 6.468 97.592 1.00 55.97 C
ATOM 12 O2' U B1006 -44.378 5.548 96.778 1.00 55.96 O
ATOM 13 C1' U B1006 -44.092 7.113 98.549 1.00 55.85 C
ATOM 14 N1 U B1006 -44.472 7.043 99.962 1.00 56.50 N
ATOM 15 C2 U B1006 -44.576 5.790 100.546 1.00 57.32 C
ATOM 16 O2 U B1006 -44.478 4.727 99.989 1.00 57.56 O
ATOM 17 N3 U B1006 -44.849 5.782 101.874 1.00 57.93 N
ATOM 18 C4 U B1006 -45.023 6.877 102.691 1.00 57.84 C
ATOM 19 O4 U B1006 -45.307 6.664 103.879 1.00 58.53 O
ATOM 20 C5 U B1006 -44.872 8.145 102.023 1.00 56.96 C
ATOM 21 C6 U B1006 -44.582 8.177 100.716 1.00 56.34 C
ATOM 22 P A B1007 -47.445 6.968 95.068 1.00 64.80 P
ATOM 23 OP1 A B1007 -47.597 7.010 93.589 1.00 64.38 O
ATOM 24 OP2 A B1007 -48.211 7.873 95.875 1.00 64.86 O
ATOM 25 O5' A B1007 -47.680 5.489 95.618 1.00 65.67 O
TER
ATOM 2 P G A 958 -43.402 9.685 111.605 1.00 64.06 P
ATOM 3 OP1 G A 958 -43.221 8.488 112.475 1.00 65.08 O
ATOM 4 OP2 G A 958 -42.213 10.424 111.151 1.00 63.30 O
ATOM 5 O5' G A 958 -44.281 9.301 110.357 1.00 63.62 O
ATOM 6 C5' G A 958 -45.283 8.308 110.469 1.00 64.29 C
ATOM 7 C4' G A 958 -46.035 8.151 109.188 1.00 63.77 C
ATOM 8 O4' G A 958 -46.385 9.456 108.666 1.00 63.00 O
ATOM 9 C3' G A 958 -45.263 7.500 108.069 1.00 63.27 C
ATOM 10 O3' G A 958 -45.267 6.097 108.181 1.00 63.96 O
ATOM 11 C2' G A 958 -45.989 8.012 106.838 1.00 62.53 C
ATOM 12 O2' G A 958 -47.211 7.309 106.663 1.00 63.00 O
ATOM 13 C1' G A 958 -46.319 9.441 107.260 1.00 62.23 C
ATOM 14 N9 G A 958 -45.290 10.410 106.829 1.00 61.40 N
ATOM 15 C8 G A 958 -44.286 10.887 107.610 1.00 61.44 C
ATOM 16 N7 G A 958 -43.523 11.747 106.980 1.00 60.64 N
ATOM 17 C5 G A 958 -44.073 11.869 105.714 1.00 60.05 C
ATOM 18 C6 G A 958 -43.673 12.647 104.601 1.00 59.15 C
ATOM 19 O6 G A 958 -42.731 13.419 104.481 1.00 58.66 O
ATOM 20 N1 G A 958 -44.494 12.473 103.526 1.00 58.86 N
ATOM 21 C2 G A 958 -45.571 11.653 103.503 1.00 59.36 C
ATOM 22 N2 G A 958 -46.244 11.616 102.346 1.00 59.00 N
ATOM 23 N3 G A 958 -45.949 10.914 104.517 1.00 60.19 N
ATOM 24 C4 G A 958 -45.166 11.058 105.604 1.00 60.50 C
ATOM 25 P A A 959 -43.911 5.249 108.032 1.00 63.78 P
ATOM 26 OP1 A A 959 -43.230 5.290 109.355 1.00 64.39 O
ATOM 27 OP2 A A 959 -43.181 5.754 106.832 1.00 62.77 O
ATOM 28 O5' A A 959 -44.461 3.775 107.749 1.00 64.43 O
TER
ATOM 1 O3' A B1005 -43.797 10.992 99.134 1.00 61.35 O
ATOM 2 P U B1006 -45.035 11.719 98.453 1.00 54.17 P
ATOM 3 OP1 U B1006 -44.523 12.941 97.782 1.00 53.40 O
ATOM 4 OP2 U B1006 -46.098 11.880 99.524 1.00 54.74 O
ATOM 5 O5' U B1006 -45.514 10.647 97.365 1.00 54.27 O
ATOM 6 C5' U B1006 -44.608 10.047 96.472 1.00 54.01 C
ATOM 7 C4' U B1006 -44.375 8.592 96.804 1.00 54.66 C
ATOM 8 O4' U B1006 -43.911 8.450 98.161 1.00 55.11 O
ATOM 9 C3' U B1006 -45.570 7.655 96.751 1.00 55.26 C
ATOM 10 O3' U B1006 -45.917 7.277 95.426 1.00 55.06 O
ATOM 11 C2' U B1006 -45.095 6.468 97.592 1.00 55.97 C
ATOM 12 O2' U B1006 -44.378 5.548 96.778 1.00 55.96 O
ATOM 13 C1' U B1006 -44.092 7.113 98.549 1.00 55.85 C
ATOM 14 N1 U B1006 -44.472 7.043 99.962 1.00 56.50 N
ATOM 15 C2 U B1006 -44.576 5.790 100.546 1.00 57.32 C
ATOM 16 O2 U B1006 -44.478 4.727 99.989 1.00 57.56 O
ATOM 17 N3 U B1006 -44.849 5.782 101.874 1.00 57.93 N
ATOM 18 C4 U B1006 -45.023 6.877 102.691 1.00 57.84 C
ATOM 19 O4 U B1006 -45.307 6.664 103.879 1.00 58.53 O
ATOM 20 C5 U B1006 -44.872 8.145 102.023 1.00 56.96 C
ATOM 21 C6 U B1006 -44.582 8.177 100.716 1.00 56.34 C
ATOM 22 P A B1007 -47.445 6.968 95.068 1.00 64.80 P
ATOM 23 OP1 A B1007 -47.597 7.010 93.589 1.00 64.38 O
ATOM 24 OP2 A B1007 -48.211 7.873 95.875 1.00 64.86 O
ATOM 25 O5' A B1007 -47.680 5.489 95.618 1.00 65.67 O
TER
Atoms:
OP1: (-43.221,8.488,112.475)
OP2: (-42.213,10.424,111.151)
C3': (-45.263,7.500,108.069)
C1': (-46.319,9.441,107.260)
C5': (-45.283,8.308,110.469)
O6: (-42.731,13.419,104.481)
O4': (-46.385,9.456,108.666)
C8: (-44.286,10.887,107.610)
C2: (-45.571,11.653,103.503)
C6: (-43.673,12.647,104.601)
C5: (-44.073,11.869,105.714)
C4: (-45.166,11.058,105.604)
P: (-43.402,9.685,111.605)
C4': (-46.035,8.151,109.188)
C2': (-45.989,8.012,106.838)
O2': (-47.211,7.309,106.663)
N1: (-44.494,12.473,103.526)
N2: (-46.244,11.616,102.346)
N3: (-45.949,10.914,104.517)
N7: (-43.523,11.747,106.980)
N9: (-45.290,10.410,106.829)
O5': (-44.281,9.301,110.357)
O3': (-45.267,6.097,108.181)
OP2: (-42.213,10.424,111.151)
C3': (-45.263,7.500,108.069)
C1': (-46.319,9.441,107.260)
C5': (-45.283,8.308,110.469)
O6: (-42.731,13.419,104.481)
O4': (-46.385,9.456,108.666)
C8: (-44.286,10.887,107.610)
C2: (-45.571,11.653,103.503)
C6: (-43.673,12.647,104.601)
C5: (-44.073,11.869,105.714)
C4: (-45.166,11.058,105.604)
P: (-43.402,9.685,111.605)
C4': (-46.035,8.151,109.188)
C2': (-45.989,8.012,106.838)
O2': (-47.211,7.309,106.663)
N1: (-44.494,12.473,103.526)
N2: (-46.244,11.616,102.346)
N3: (-45.949,10.914,104.517)
N7: (-43.523,11.747,106.980)
N9: (-45.290,10.410,106.829)
O5': (-44.281,9.301,110.357)
O3': (-45.267,6.097,108.181)
C4: (-45.023,6.877,102.691)
N3: (-44.849,5.782,101.874)
OP1: (-44.523,12.941,97.782)
OP2: (-46.098,11.880,99.524)
C2: (-44.576,5.790,100.546)
C1': (-44.092,7.113,98.549)
C3': (-45.570,7.655,96.751)
O5': (-45.514,10.647,97.365)
O4': (-43.911,8.450,98.161)
C5': (-44.608,10.047,96.472)
P: (-45.035,11.719,98.453)
C4': (-44.375,8.592,96.804)
C2': (-45.095,6.468,97.592)
O2': (-44.378,5.548,96.778)
N1: (-44.472,7.043,99.962)
O4: (-45.307,6.664,103.879)
O2: (-44.478,4.727,99.989)
C6: (-44.582,8.177,100.716)
C5: (-44.872,8.145,102.023)
O3': (-45.917,7.277,95.426)
N3: (-44.849,5.782,101.874)
OP1: (-44.523,12.941,97.782)
OP2: (-46.098,11.880,99.524)
C2: (-44.576,5.790,100.546)
C1': (-44.092,7.113,98.549)
C3': (-45.570,7.655,96.751)
O5': (-45.514,10.647,97.365)
O4': (-43.911,8.450,98.161)
C5': (-44.608,10.047,96.472)
P: (-45.035,11.719,98.453)
C4': (-44.375,8.592,96.804)
C2': (-45.095,6.468,97.592)
O2': (-44.378,5.548,96.778)
N1: (-44.472,7.043,99.962)
O4: (-45.307,6.664,103.879)
O2: (-44.478,4.727,99.989)
C6: (-44.582,8.177,100.716)
C5: (-44.872,8.145,102.023)
O3': (-45.917,7.277,95.426)
Image (generated by PyMOL):