Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1DDY:C22:C24
Extra
PDB:
ATOM 1 O3' C A 21 -38.103 -45.034 14.828 1.00 34.49 O
ATOM 2 P U A 22 -39.442 -45.886 14.531 1.00 37.08 P
ATOM 3 OP1 U A 22 -40.614 -44.969 14.387 1.00 30.71 O
ATOM 4 OP2 U A 22 -39.486 -47.002 15.516 1.00 37.59 O
ATOM 5 O5' U A 22 -39.145 -46.530 13.116 1.00 33.38 O
ATOM 6 C5' U A 22 -38.946 -45.708 11.990 1.00 32.98 C
ATOM 7 C4' U A 22 -38.210 -46.475 10.942 1.00 33.46 C
ATOM 8 O4' U A 22 -36.809 -46.579 11.305 1.00 35.16 O
ATOM 9 C3' U A 22 -38.703 -47.899 10.742 1.00 32.67 C
ATOM 10 O3' U A 22 -38.632 -48.219 9.385 1.00 31.38 O
ATOM 11 C2' U A 22 -37.700 -48.737 11.523 1.00 33.24 C
ATOM 12 O2' U A 22 -37.526 -50.013 10.935 1.00 31.76 O
ATOM 13 C1' U A 22 -36.421 -47.934 11.350 1.00 34.25 C
ATOM 14 N1 U A 22 -35.504 -48.091 12.483 1.00 36.88 N
ATOM 15 C2 U A 22 -34.290 -48.708 12.255 1.00 38.92 C
ATOM 16 O2 U A 22 -33.976 -49.192 11.170 1.00 39.45 O
ATOM 17 N3 U A 22 -33.457 -48.753 13.342 1.00 39.42 N
ATOM 18 C4 U A 22 -33.714 -48.274 14.607 1.00 37.84 C
ATOM 19 O4 U A 22 -32.828 -48.321 15.458 1.00 38.07 O
ATOM 20 C5 U A 22 -35.007 -47.688 14.773 1.00 39.05 C
ATOM 21 C6 U A 22 -35.836 -47.617 13.729 1.00 38.15 C
ATOM 22 P C A 23 -39.852 -48.985 8.724 1.00 30.14 P
ATOM 23 OP1 C A 23 -40.334 -49.961 9.741 1.00 30.20 O
ATOM 24 OP2 C A 23 -39.350 -49.461 7.414 1.00 31.62 O
ATOM 25 O5' C A 23 -40.958 -47.853 8.503 1.00 28.14 O
TER
ATOM 1 O3' C B 23 -40.707 -44.305 9.103 1.00 21.17 O
ATOM 2 P A B 24 -39.759 -43.763 7.912 1.00 18.21 P
ATOM 3 OP1 A B 24 -40.499 -42.821 7.040 1.00 16.51 O
ATOM 4 OP2 A B 24 -38.956 -44.860 7.313 1.00 19.56 O
ATOM 5 O5' A B 24 -38.765 -42.869 8.755 1.00 21.42 O
ATOM 6 C5' A B 24 -39.231 -42.222 9.941 1.00 20.91 C
ATOM 7 C4' A B 24 -38.073 -41.627 10.657 1.00 20.25 C
ATOM 8 O4' A B 24 -37.356 -42.699 11.305 1.00 19.41 O
ATOM 9 C3' A B 24 -37.074 -40.993 9.706 1.00 21.79 C
ATOM 10 O3' A B 24 -37.436 -39.652 9.416 1.00 22.47 O
ATOM 11 C2' A B 24 -35.764 -41.142 10.452 1.00 22.20 C
ATOM 12 O2' A B 24 -35.575 -40.101 11.382 1.00 24.64 O
ATOM 13 C1' A B 24 -35.967 -42.496 11.153 1.00 22.57 C
ATOM 14 N9 A B 24 -35.423 -43.637 10.411 1.00 24.63 N
ATOM 15 C8 A B 24 -35.740 -44.031 9.132 1.00 25.96 C
ATOM 16 N7 A B 24 -35.029 -45.045 8.700 1.00 28.09 N
ATOM 17 C5 A B 24 -34.199 -45.352 9.772 1.00 28.10 C
ATOM 18 C6 A B 24 -33.193 -46.322 9.945 1.00 28.35 C
ATOM 19 N6 A B 24 -32.820 -47.176 8.993 1.00 28.52 N
ATOM 20 N1 A B 24 -32.568 -46.376 11.143 1.00 27.15 N
ATOM 21 C2 A B 24 -32.928 -45.509 12.089 1.00 26.06 C
ATOM 22 N3 A B 24 -33.847 -44.546 12.045 1.00 27.88 N
ATOM 23 C4 A B 24 -34.452 -44.515 10.842 1.00 26.79 C
ATOM 24 P G B 25 -38.384 -39.333 8.146 1.00 24.89 P
ATOM 25 OP1 G B 25 -39.789 -39.677 8.502 1.00 27.07 O
ATOM 26 OP2 G B 25 -37.784 -39.922 6.915 1.00 25.51 O
ATOM 27 O5' G B 25 -38.324 -37.743 8.046 1.00 24.06 O
TER
ATOM 2 P U A 22 -39.442 -45.886 14.531 1.00 37.08 P
ATOM 3 OP1 U A 22 -40.614 -44.969 14.387 1.00 30.71 O
ATOM 4 OP2 U A 22 -39.486 -47.002 15.516 1.00 37.59 O
ATOM 5 O5' U A 22 -39.145 -46.530 13.116 1.00 33.38 O
ATOM 6 C5' U A 22 -38.946 -45.708 11.990 1.00 32.98 C
ATOM 7 C4' U A 22 -38.210 -46.475 10.942 1.00 33.46 C
ATOM 8 O4' U A 22 -36.809 -46.579 11.305 1.00 35.16 O
ATOM 9 C3' U A 22 -38.703 -47.899 10.742 1.00 32.67 C
ATOM 10 O3' U A 22 -38.632 -48.219 9.385 1.00 31.38 O
ATOM 11 C2' U A 22 -37.700 -48.737 11.523 1.00 33.24 C
ATOM 12 O2' U A 22 -37.526 -50.013 10.935 1.00 31.76 O
ATOM 13 C1' U A 22 -36.421 -47.934 11.350 1.00 34.25 C
ATOM 14 N1 U A 22 -35.504 -48.091 12.483 1.00 36.88 N
ATOM 15 C2 U A 22 -34.290 -48.708 12.255 1.00 38.92 C
ATOM 16 O2 U A 22 -33.976 -49.192 11.170 1.00 39.45 O
ATOM 17 N3 U A 22 -33.457 -48.753 13.342 1.00 39.42 N
ATOM 18 C4 U A 22 -33.714 -48.274 14.607 1.00 37.84 C
ATOM 19 O4 U A 22 -32.828 -48.321 15.458 1.00 38.07 O
ATOM 20 C5 U A 22 -35.007 -47.688 14.773 1.00 39.05 C
ATOM 21 C6 U A 22 -35.836 -47.617 13.729 1.00 38.15 C
ATOM 22 P C A 23 -39.852 -48.985 8.724 1.00 30.14 P
ATOM 23 OP1 C A 23 -40.334 -49.961 9.741 1.00 30.20 O
ATOM 24 OP2 C A 23 -39.350 -49.461 7.414 1.00 31.62 O
ATOM 25 O5' C A 23 -40.958 -47.853 8.503 1.00 28.14 O
TER
ATOM 1 O3' C B 23 -40.707 -44.305 9.103 1.00 21.17 O
ATOM 2 P A B 24 -39.759 -43.763 7.912 1.00 18.21 P
ATOM 3 OP1 A B 24 -40.499 -42.821 7.040 1.00 16.51 O
ATOM 4 OP2 A B 24 -38.956 -44.860 7.313 1.00 19.56 O
ATOM 5 O5' A B 24 -38.765 -42.869 8.755 1.00 21.42 O
ATOM 6 C5' A B 24 -39.231 -42.222 9.941 1.00 20.91 C
ATOM 7 C4' A B 24 -38.073 -41.627 10.657 1.00 20.25 C
ATOM 8 O4' A B 24 -37.356 -42.699 11.305 1.00 19.41 O
ATOM 9 C3' A B 24 -37.074 -40.993 9.706 1.00 21.79 C
ATOM 10 O3' A B 24 -37.436 -39.652 9.416 1.00 22.47 O
ATOM 11 C2' A B 24 -35.764 -41.142 10.452 1.00 22.20 C
ATOM 12 O2' A B 24 -35.575 -40.101 11.382 1.00 24.64 O
ATOM 13 C1' A B 24 -35.967 -42.496 11.153 1.00 22.57 C
ATOM 14 N9 A B 24 -35.423 -43.637 10.411 1.00 24.63 N
ATOM 15 C8 A B 24 -35.740 -44.031 9.132 1.00 25.96 C
ATOM 16 N7 A B 24 -35.029 -45.045 8.700 1.00 28.09 N
ATOM 17 C5 A B 24 -34.199 -45.352 9.772 1.00 28.10 C
ATOM 18 C6 A B 24 -33.193 -46.322 9.945 1.00 28.35 C
ATOM 19 N6 A B 24 -32.820 -47.176 8.993 1.00 28.52 N
ATOM 20 N1 A B 24 -32.568 -46.376 11.143 1.00 27.15 N
ATOM 21 C2 A B 24 -32.928 -45.509 12.089 1.00 26.06 C
ATOM 22 N3 A B 24 -33.847 -44.546 12.045 1.00 27.88 N
ATOM 23 C4 A B 24 -34.452 -44.515 10.842 1.00 26.79 C
ATOM 24 P G B 25 -38.384 -39.333 8.146 1.00 24.89 P
ATOM 25 OP1 G B 25 -39.789 -39.677 8.502 1.00 27.07 O
ATOM 26 OP2 G B 25 -37.784 -39.922 6.915 1.00 25.51 O
ATOM 27 O5' G B 25 -38.324 -37.743 8.046 1.00 24.06 O
TER
Atoms:
C4: (-33.714,-48.274,14.607)
N3: (-33.457,-48.753,13.342)
OP1: (-40.614,-44.969,14.387)
OP2: (-39.486,-47.002,15.516)
C2: (-34.290,-48.708,12.255)
C1': (-36.421,-47.934,11.350)
C3': (-38.703,-47.899,10.742)
O5': (-39.145,-46.530,13.116)
O4': (-36.809,-46.579,11.305)
C5': (-38.946,-45.708,11.990)
P: (-39.442,-45.886,14.531)
C4': (-38.210,-46.475,10.942)
C2': (-37.700,-48.737,11.523)
O2': (-37.526,-50.013,10.935)
N1: (-35.504,-48.091,12.483)
O4: (-32.828,-48.321,15.458)
O2: (-33.976,-49.192,11.170)
C6: (-35.836,-47.617,13.729)
C5: (-35.007,-47.688,14.773)
O3': (-38.632,-48.219,9.385)
N3: (-33.457,-48.753,13.342)
OP1: (-40.614,-44.969,14.387)
OP2: (-39.486,-47.002,15.516)
C2: (-34.290,-48.708,12.255)
C1': (-36.421,-47.934,11.350)
C3': (-38.703,-47.899,10.742)
O5': (-39.145,-46.530,13.116)
O4': (-36.809,-46.579,11.305)
C5': (-38.946,-45.708,11.990)
P: (-39.442,-45.886,14.531)
C4': (-38.210,-46.475,10.942)
C2': (-37.700,-48.737,11.523)
O2': (-37.526,-50.013,10.935)
N1: (-35.504,-48.091,12.483)
O4: (-32.828,-48.321,15.458)
O2: (-33.976,-49.192,11.170)
C6: (-35.836,-47.617,13.729)
C5: (-35.007,-47.688,14.773)
O3': (-38.632,-48.219,9.385)
OP1: (-40.499,-42.821,7.040)
OP2: (-38.956,-44.860,7.313)
C3': (-37.074,-40.993,9.706)
C1': (-35.967,-42.496,11.153)
C5': (-39.231,-42.222,9.941)
O4': (-37.356,-42.699,11.305)
C8: (-35.740,-44.031,9.132)
O2': (-35.575,-40.101,11.382)
C6: (-33.193,-46.322,9.945)
C5: (-34.199,-45.352,9.772)
C4: (-34.452,-44.515,10.842)
P: (-39.759,-43.763,7.912)
C4': (-38.073,-41.627,10.657)
C2': (-35.764,-41.142,10.452)
C2: (-32.928,-45.509,12.089)
N1: (-32.568,-46.376,11.143)
N3: (-33.847,-44.546,12.045)
N6: (-32.820,-47.176,8.993)
N7: (-35.029,-45.045,8.700)
N9: (-35.423,-43.637,10.411)
O5': (-38.765,-42.869,8.755)
O3': (-37.436,-39.652,9.416)
OP2: (-38.956,-44.860,7.313)
C3': (-37.074,-40.993,9.706)
C1': (-35.967,-42.496,11.153)
C5': (-39.231,-42.222,9.941)
O4': (-37.356,-42.699,11.305)
C8: (-35.740,-44.031,9.132)
O2': (-35.575,-40.101,11.382)
C6: (-33.193,-46.322,9.945)
C5: (-34.199,-45.352,9.772)
C4: (-34.452,-44.515,10.842)
P: (-39.759,-43.763,7.912)
C4': (-38.073,-41.627,10.657)
C2': (-35.764,-41.142,10.452)
C2: (-32.928,-45.509,12.089)
N1: (-32.568,-46.376,11.143)
N3: (-33.847,-44.546,12.045)
N6: (-32.820,-47.176,8.993)
N7: (-35.029,-45.045,8.700)
N9: (-35.423,-43.637,10.411)
O5': (-38.765,-42.869,8.755)
O3': (-37.436,-39.652,9.416)
Image (generated by PyMOL):