Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:0253:0235
Extra
PDB:
ATOM 1 O3' G A 252 90.888 118.834 3.008 1.00 47.94 O
ATOM 2 P U A 253 89.559 118.706 3.896 1.00 49.59 P
ATOM 3 OP1 U A 253 89.890 119.266 5.230 1.00 47.42 O
ATOM 4 OP2 U A 253 89.044 117.317 3.793 1.00 48.84 O
ATOM 5 O5' U A 253 88.519 119.672 3.169 1.00 48.66 O
ATOM 6 C5' U A 253 88.344 121.039 3.601 1.00 49.07 C
ATOM 7 C4' U A 253 87.970 121.907 2.427 1.00 49.20 C
ATOM 8 O4' U A 253 89.110 122.032 1.537 1.00 48.96 O
ATOM 9 C3' U A 253 86.878 121.317 1.554 1.00 48.75 C
ATOM 10 O3' U A 253 85.581 121.568 2.070 1.00 48.28 O
ATOM 11 C2' U A 253 87.137 121.973 0.206 1.00 47.06 C
ATOM 12 O2' U A 253 86.627 123.288 0.121 1.00 46.05 O
ATOM 13 C1' U A 253 88.667 122.003 0.186 1.00 46.53 C
ATOM 14 N1 U A 253 89.275 120.836 -0.478 1.00 45.34 N
ATOM 15 C2 U A 253 89.103 120.703 -1.852 1.00 44.51 C
ATOM 16 O2 U A 253 88.479 121.505 -2.525 1.00 46.02 O
ATOM 17 N3 U A 253 89.691 119.597 -2.402 1.00 40.96 N
ATOM 18 C4 U A 253 90.422 118.636 -1.746 1.00 44.62 C
ATOM 19 O4 U A 253 90.895 117.694 -2.385 1.00 45.06 O
ATOM 20 C5 U A 253 90.559 118.845 -0.333 1.00 44.29 C
ATOM 21 C6 U A 253 89.993 119.906 0.234 1.00 42.56 C
ATOM 22 P G A 254 84.487 120.396 2.046 1.00 50.32 P
ATOM 23 OP1 G A 254 83.197 120.998 2.478 1.00 49.51 O
ATOM 24 OP2 G A 254 85.036 119.222 2.766 1.00 50.16 O
ATOM 25 O5' G A 254 84.387 119.979 0.508 1.00 52.83 O
TER
ATOM 1 O3' G B 234 93.479 117.381 -8.215 1.00 62.79 O
ATOM 2 P A B 235 93.986 118.345 -9.396 1.00 62.73 P
ATOM 3 OP1 A B 235 93.506 117.756 -10.672 1.00 63.54 O
ATOM 4 OP2 A B 235 95.443 118.576 -9.198 1.00 60.77 O
ATOM 5 O5' A B 235 93.191 119.701 -9.150 1.00 61.12 O
ATOM 6 C5' A B 235 91.780 119.798 -9.444 1.00 59.36 C
ATOM 7 C4' A B 235 91.174 120.953 -8.682 1.00 60.12 C
ATOM 8 O4' A B 235 91.053 120.606 -7.268 1.00 59.16 O
ATOM 9 C3' A B 235 92.003 122.235 -8.727 1.00 59.41 C
ATOM 10 O3' A B 235 91.143 123.364 -8.653 1.00 60.94 O
ATOM 11 C2' A B 235 92.813 122.132 -7.440 1.00 58.18 C
ATOM 12 O2' A B 235 93.310 123.361 -6.960 1.00 58.04 O
ATOM 13 C1' A B 235 91.767 121.549 -6.494 1.00 58.25 C
ATOM 14 N9 A B 235 92.333 120.883 -5.323 1.00 56.96 N
ATOM 15 C8 A B 235 93.009 119.691 -5.260 1.00 56.59 C
ATOM 16 N7 A B 235 93.420 119.381 -4.057 1.00 55.24 N
ATOM 17 C5 A B 235 92.980 120.439 -3.272 1.00 55.22 C
ATOM 18 C6 A B 235 93.103 120.713 -1.900 1.00 53.26 C
ATOM 19 N6 A B 235 93.744 119.917 -1.043 1.00 52.69 N
ATOM 20 N1 A B 235 92.543 121.849 -1.433 1.00 51.88 N
ATOM 21 C2 A B 235 91.912 122.651 -2.293 1.00 53.20 C
ATOM 22 N3 A B 235 91.736 122.507 -3.604 1.00 55.72 N
ATOM 23 C4 A B 235 92.302 121.366 -4.037 1.00 55.25 C
ATOM 24 P A B 236 90.640 124.069 -10.002 1.00 61.69 P
ATOM 25 OP1 A B 236 91.740 123.943 -10.996 1.00 62.83 O
ATOM 26 OP2 A B 236 90.123 125.415 -9.639 1.00 61.86 O
ATOM 27 O5' A B 236 89.404 123.176 -10.466 1.00 59.69 O
TER
ATOM 2 P U A 253 89.559 118.706 3.896 1.00 49.59 P
ATOM 3 OP1 U A 253 89.890 119.266 5.230 1.00 47.42 O
ATOM 4 OP2 U A 253 89.044 117.317 3.793 1.00 48.84 O
ATOM 5 O5' U A 253 88.519 119.672 3.169 1.00 48.66 O
ATOM 6 C5' U A 253 88.344 121.039 3.601 1.00 49.07 C
ATOM 7 C4' U A 253 87.970 121.907 2.427 1.00 49.20 C
ATOM 8 O4' U A 253 89.110 122.032 1.537 1.00 48.96 O
ATOM 9 C3' U A 253 86.878 121.317 1.554 1.00 48.75 C
ATOM 10 O3' U A 253 85.581 121.568 2.070 1.00 48.28 O
ATOM 11 C2' U A 253 87.137 121.973 0.206 1.00 47.06 C
ATOM 12 O2' U A 253 86.627 123.288 0.121 1.00 46.05 O
ATOM 13 C1' U A 253 88.667 122.003 0.186 1.00 46.53 C
ATOM 14 N1 U A 253 89.275 120.836 -0.478 1.00 45.34 N
ATOM 15 C2 U A 253 89.103 120.703 -1.852 1.00 44.51 C
ATOM 16 O2 U A 253 88.479 121.505 -2.525 1.00 46.02 O
ATOM 17 N3 U A 253 89.691 119.597 -2.402 1.00 40.96 N
ATOM 18 C4 U A 253 90.422 118.636 -1.746 1.00 44.62 C
ATOM 19 O4 U A 253 90.895 117.694 -2.385 1.00 45.06 O
ATOM 20 C5 U A 253 90.559 118.845 -0.333 1.00 44.29 C
ATOM 21 C6 U A 253 89.993 119.906 0.234 1.00 42.56 C
ATOM 22 P G A 254 84.487 120.396 2.046 1.00 50.32 P
ATOM 23 OP1 G A 254 83.197 120.998 2.478 1.00 49.51 O
ATOM 24 OP2 G A 254 85.036 119.222 2.766 1.00 50.16 O
ATOM 25 O5' G A 254 84.387 119.979 0.508 1.00 52.83 O
TER
ATOM 1 O3' G B 234 93.479 117.381 -8.215 1.00 62.79 O
ATOM 2 P A B 235 93.986 118.345 -9.396 1.00 62.73 P
ATOM 3 OP1 A B 235 93.506 117.756 -10.672 1.00 63.54 O
ATOM 4 OP2 A B 235 95.443 118.576 -9.198 1.00 60.77 O
ATOM 5 O5' A B 235 93.191 119.701 -9.150 1.00 61.12 O
ATOM 6 C5' A B 235 91.780 119.798 -9.444 1.00 59.36 C
ATOM 7 C4' A B 235 91.174 120.953 -8.682 1.00 60.12 C
ATOM 8 O4' A B 235 91.053 120.606 -7.268 1.00 59.16 O
ATOM 9 C3' A B 235 92.003 122.235 -8.727 1.00 59.41 C
ATOM 10 O3' A B 235 91.143 123.364 -8.653 1.00 60.94 O
ATOM 11 C2' A B 235 92.813 122.132 -7.440 1.00 58.18 C
ATOM 12 O2' A B 235 93.310 123.361 -6.960 1.00 58.04 O
ATOM 13 C1' A B 235 91.767 121.549 -6.494 1.00 58.25 C
ATOM 14 N9 A B 235 92.333 120.883 -5.323 1.00 56.96 N
ATOM 15 C8 A B 235 93.009 119.691 -5.260 1.00 56.59 C
ATOM 16 N7 A B 235 93.420 119.381 -4.057 1.00 55.24 N
ATOM 17 C5 A B 235 92.980 120.439 -3.272 1.00 55.22 C
ATOM 18 C6 A B 235 93.103 120.713 -1.900 1.00 53.26 C
ATOM 19 N6 A B 235 93.744 119.917 -1.043 1.00 52.69 N
ATOM 20 N1 A B 235 92.543 121.849 -1.433 1.00 51.88 N
ATOM 21 C2 A B 235 91.912 122.651 -2.293 1.00 53.20 C
ATOM 22 N3 A B 235 91.736 122.507 -3.604 1.00 55.72 N
ATOM 23 C4 A B 235 92.302 121.366 -4.037 1.00 55.25 C
ATOM 24 P A B 236 90.640 124.069 -10.002 1.00 61.69 P
ATOM 25 OP1 A B 236 91.740 123.943 -10.996 1.00 62.83 O
ATOM 26 OP2 A B 236 90.123 125.415 -9.639 1.00 61.86 O
ATOM 27 O5' A B 236 89.404 123.176 -10.466 1.00 59.69 O
TER
Atoms:
C4: (90.422,118.636,-1.746)
N3: (89.691,119.597,-2.402)
OP1: (89.890,119.266,5.230)
OP2: (89.044,117.317,3.793)
C2: (89.103,120.703,-1.852)
C1': (88.667,122.003,0.186)
C3': (86.878,121.317,1.554)
O5': (88.519,119.672,3.169)
O4': (89.110,122.032,1.537)
C5': (88.344,121.039,3.601)
P: (89.559,118.706,3.896)
C4': (87.970,121.907,2.427)
C2': (87.137,121.973,0.206)
O2': (86.627,123.288,0.121)
N1: (89.275,120.836,-0.478)
O4: (90.895,117.694,-2.385)
O2: (88.479,121.505,-2.525)
C6: (89.993,119.906,0.234)
C5: (90.559,118.845,-0.333)
O3': (85.581,121.568,2.070)
N3: (89.691,119.597,-2.402)
OP1: (89.890,119.266,5.230)
OP2: (89.044,117.317,3.793)
C2: (89.103,120.703,-1.852)
C1': (88.667,122.003,0.186)
C3': (86.878,121.317,1.554)
O5': (88.519,119.672,3.169)
O4': (89.110,122.032,1.537)
C5': (88.344,121.039,3.601)
P: (89.559,118.706,3.896)
C4': (87.970,121.907,2.427)
C2': (87.137,121.973,0.206)
O2': (86.627,123.288,0.121)
N1: (89.275,120.836,-0.478)
O4: (90.895,117.694,-2.385)
O2: (88.479,121.505,-2.525)
C6: (89.993,119.906,0.234)
C5: (90.559,118.845,-0.333)
O3': (85.581,121.568,2.070)
OP1: (93.506,117.756,-10.672)
OP2: (95.443,118.576,-9.198)
C3': (92.003,122.235,-8.727)
C1': (91.767,121.549,-6.494)
C5': (91.780,119.798,-9.444)
O4': (91.053,120.606,-7.268)
C8: (93.009,119.691,-5.260)
O2': (93.310,123.361,-6.960)
C6: (93.103,120.713,-1.900)
C5: (92.980,120.439,-3.272)
C4: (92.302,121.366,-4.037)
P: (93.986,118.345,-9.396)
C4': (91.174,120.953,-8.682)
C2': (92.813,122.132,-7.440)
C2: (91.912,122.651,-2.293)
N1: (92.543,121.849,-1.433)
N3: (91.736,122.507,-3.604)
N6: (93.744,119.917,-1.043)
N7: (93.420,119.381,-4.057)
N9: (92.333,120.883,-5.323)
O5': (93.191,119.701,-9.150)
O3': (91.143,123.364,-8.653)
OP2: (95.443,118.576,-9.198)
C3': (92.003,122.235,-8.727)
C1': (91.767,121.549,-6.494)
C5': (91.780,119.798,-9.444)
O4': (91.053,120.606,-7.268)
C8: (93.009,119.691,-5.260)
O2': (93.310,123.361,-6.960)
C6: (93.103,120.713,-1.900)
C5: (92.980,120.439,-3.272)
C4: (92.302,121.366,-4.037)
P: (93.986,118.345,-9.396)
C4': (91.174,120.953,-8.682)
C2': (92.813,122.132,-7.440)
C2: (91.912,122.651,-2.293)
N1: (92.543,121.849,-1.433)
N3: (91.736,122.507,-3.604)
N6: (93.744,119.917,-1.043)
N7: (93.420,119.381,-4.057)
N9: (92.333,120.883,-5.323)
O5': (93.191,119.701,-9.150)
O3': (91.143,123.364,-8.653)
Image (generated by PyMOL):