ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J01:A388:A386

Extra

PDB:
ATOM 1 O3' G A 387 -13.682 193.496 136.682 1.00 11.53 O
ATOM 2 P U A 388 -14.715 192.455 137.350 1.00 6.99 P
ATOM 3 OP1 U A 388 -13.897 191.370 137.954 1.00 27.81 O
ATOM 4 OP2 U A 388 -15.819 192.117 136.410 1.00 27.81 O
ATOM 5 O5' U A 388 -15.370 193.321 138.512 1.00 16.93 O
ATOM 6 C5' U A 388 -14.589 193.702 139.671 1.00 16.93 C
ATOM 7 C4' U A 388 -15.035 195.042 140.198 1.00 16.93 C
ATOM 8 O4' U A 388 -14.464 196.115 139.408 1.00 16.93 O
ATOM 9 C3' U A 388 -16.534 195.290 140.181 1.00 16.93 C
ATOM 10 O3' U A 388 -17.182 194.690 141.305 1.00 16.93 O
ATOM 11 C2' U A 388 -16.606 196.812 140.184 1.00 16.93 C
ATOM 12 O2' U A 388 -16.464 197.357 141.473 1.00 16.93 O
ATOM 13 C1' U A 388 -15.375 197.192 139.355 1.00 16.93 C
ATOM 14 N1 U A 388 -15.704 197.450 137.948 1.00 36.60 N
ATOM 15 C2 U A 388 -16.586 198.479 137.678 1.00 36.72 C
ATOM 16 O2 U A 388 -17.075 199.178 138.552 1.00 36.77 O
ATOM 17 N3 U A 388 -16.876 198.661 136.354 1.00 36.79 N
ATOM 18 C4 U A 388 -16.385 197.947 135.303 1.00 36.72 C
ATOM 19 O4 U A 388 -16.753 198.227 134.167 1.00 36.73 O
ATOM 20 C5 U A 388 -15.469 196.909 135.659 1.00 36.71 C
ATOM 21 C6 U A 388 -15.169 196.702 136.937 1.00 36.61 C
ATOM 22 P A A 389 -18.591 193.928 141.108 1.00 12.78 P
ATOM 23 OP1 A A 389 -18.820 193.069 142.293 1.00 43.23 O
ATOM 24 OP2 A A 389 -18.619 193.331 139.740 1.00 43.45 O
ATOM 25 O5' A A 389 -19.670 195.092 141.160 1.00 12.44 O
TER

ATOM 1 O3' G B 385 -10.464 201.983 141.183 1.00 33.89 O
ATOM 2 P A B 386 -10.500 201.745 139.584 1.00 39.07 P
ATOM 3 OP1 A B 386 -9.220 201.074 139.208 1.00 32.12 O
ATOM 4 OP2 A B 386 -10.882 203.023 138.912 1.00 32.29 O
ATOM 5 O5' A B 386 -11.698 200.720 139.358 1.00 29.10 O
ATOM 6 C5' A B 386 -11.657 199.397 139.920 1.00 29.10 C
ATOM 7 C4' A B 386 -11.794 198.353 138.825 1.00 29.10 C
ATOM 8 O4' A B 386 -13.013 198.603 138.081 1.00 29.10 O
ATOM 9 C3' A B 386 -10.674 198.308 137.793 1.00 29.10 C
ATOM 10 O3' A B 386 -10.548 196.946 137.396 1.00 29.10 O
ATOM 11 C2' A B 386 -11.226 199.147 136.642 1.00 29.10 C
ATOM 12 O2' A B 386 -10.725 198.780 135.375 1.00 29.10 O
ATOM 13 C1' A B 386 -12.711 198.823 136.722 1.00 29.10 C
ATOM 14 N9 A B 386 -13.595 199.875 136.239 1.00 33.90 N
ATOM 15 C8 A B 386 -14.263 200.816 136.974 1.00 33.90 C
ATOM 16 N7 A B 386 -15.058 201.571 136.265 1.00 33.90 N
ATOM 17 C5 A B 386 -14.886 201.110 134.973 1.00 33.90 C
ATOM 18 C6 A B 386 -15.456 201.494 133.760 1.00 33.90 C
ATOM 19 N6 A B 386 -16.392 202.438 133.645 1.00 33.90 N
ATOM 20 N1 A B 386 -15.042 200.858 132.647 1.00 33.90 N
ATOM 21 C2 A B 386 -14.132 199.881 132.768 1.00 33.90 C
ATOM 22 N3 A B 386 -13.539 199.415 133.860 1.00 33.90 N
ATOM 23 C4 A B 386 -13.965 200.084 134.940 1.00 33.90 C
ATOM 24 P G B 387 -9.132 196.376 136.914 1.00 43.96 P
ATOM 25 OP1 G B 387 -8.599 195.513 138.007 1.00 43.84 O
ATOM 26 OP2 G B 387 -8.313 197.508 136.401 1.00 43.84 O
ATOM 27 O5' G B 387 -9.523 195.447 135.680 1.00 11.53 O
TER

Atoms:
C4: (-16.385,197.947,135.303)
N3: (-16.876,198.661,136.354)
OP1: (-13.897,191.370,137.954)
OP2: (-15.819,192.117,136.410)
C2: (-16.586,198.479,137.678)
C1': (-15.375,197.192,139.355)
C3': (-16.534,195.290,140.181)
O5': (-15.370,193.321,138.512)
O4': (-14.464,196.115,139.408)
C5': (-14.589,193.702,139.671)
P: (-14.715,192.455,137.350)
C4': (-15.035,195.042,140.198)
C2': (-16.606,196.812,140.184)
O2': (-16.464,197.357,141.473)
N1: (-15.704,197.450,137.948)
O4: (-16.753,198.227,134.167)
O2: (-17.075,199.178,138.552)
C6: (-15.169,196.702,136.937)
C5: (-15.469,196.909,135.659)
O3': (-17.182,194.690,141.305)
OP1: (-9.220,201.074,139.208)
OP2: (-10.882,203.023,138.912)
C3': (-10.674,198.308,137.793)
C1': (-12.711,198.823,136.722)
C5': (-11.657,199.397,139.920)
O4': (-13.013,198.603,138.081)
C8: (-14.263,200.816,136.974)
O2': (-10.725,198.780,135.375)
C6: (-15.456,201.494,133.760)
C5: (-14.886,201.110,134.973)
C4: (-13.965,200.084,134.940)
P: (-10.500,201.745,139.584)
C4': (-11.794,198.353,138.825)
C2': (-11.226,199.147,136.642)
C2: (-14.132,199.881,132.768)
N1: (-15.042,200.858,132.647)
N3: (-13.539,199.415,133.860)
N6: (-16.392,202.438,133.645)
N7: (-15.058,201.571,136.265)
N9: (-13.595,199.875,136.239)
O5': (-11.698,200.720,139.358)
O3': (-10.548,196.946,137.396)
Image (generated by PyMOL):
PyMOL image
show in jmol