Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0253:0235
Extra
PDB:
ATOM 1 O3' G A 252 90.901 118.857 3.022 1.00 52.53 O
ATOM 2 P U A 253 89.560 118.675 3.882 1.00 52.63 P
ATOM 3 OP1 U A 253 89.847 119.211 5.236 1.00 51.53 O
ATOM 4 OP2 U A 253 89.111 117.272 3.734 1.00 52.59 O
ATOM 5 O5' U A 253 88.508 119.631 3.158 1.00 52.46 O
ATOM 6 C5' U A 253 88.342 121.007 3.570 1.00 53.13 C
ATOM 7 C4' U A 253 87.940 121.858 2.392 1.00 54.39 C
ATOM 8 O4' U A 253 89.066 122.005 1.486 1.00 54.79 O
ATOM 9 C3' U A 253 86.851 121.244 1.533 1.00 54.82 C
ATOM 10 O3' U A 253 85.558 121.470 2.064 1.00 54.50 O
ATOM 11 C2' U A 253 87.080 121.906 0.183 1.00 53.05 C
ATOM 12 O2' U A 253 86.546 123.210 0.117 1.00 52.25 O
ATOM 13 C1' U A 253 88.609 121.961 0.141 1.00 52.84 C
ATOM 14 N1 U A 253 89.228 120.795 -0.517 1.00 52.04 N
ATOM 15 C2 U A 253 89.041 120.637 -1.885 1.00 51.15 C
ATOM 16 O2 U A 253 88.393 121.416 -2.565 1.00 52.58 O
ATOM 17 N3 U A 253 89.641 119.531 -2.426 1.00 49.60 N
ATOM 18 C4 U A 253 90.397 118.592 -1.763 1.00 52.14 C
ATOM 19 O4 U A 253 90.875 117.648 -2.391 1.00 52.44 O
ATOM 20 C5 U A 253 90.549 118.827 -0.357 1.00 51.86 C
ATOM 21 C6 U A 253 89.973 119.889 0.200 1.00 49.83 C
ATOM 22 P G A 254 84.487 120.279 2.045 1.00 55.87 P
ATOM 23 OP1 G A 254 83.193 120.857 2.506 1.00 55.78 O
ATOM 24 OP2 G A 254 85.073 119.107 2.747 1.00 56.03 O
ATOM 25 O5' G A 254 84.370 119.881 0.503 1.00 58.65 O
TER
ATOM 1 O3' G B 234 93.514 117.303 -8.176 1.00 68.45 O
ATOM 2 P A B 235 93.944 118.262 -9.390 1.00 68.55 P
ATOM 3 OP1 A B 235 93.409 117.665 -10.643 1.00 69.92 O
ATOM 4 OP2 A B 235 95.402 118.518 -9.269 1.00 67.58 O
ATOM 5 O5' A B 235 93.144 119.608 -9.108 1.00 67.23 O
ATOM 6 C5' A B 235 91.740 119.722 -9.429 1.00 64.45 C
ATOM 7 C4' A B 235 91.132 120.874 -8.666 1.00 65.25 C
ATOM 8 O4' A B 235 91.005 120.517 -7.257 1.00 64.00 O
ATOM 9 C3' A B 235 91.963 122.155 -8.699 1.00 64.58 C
ATOM 10 O3' A B 235 91.098 123.279 -8.611 1.00 66.77 O
ATOM 11 C2' A B 235 92.773 122.038 -7.413 1.00 63.15 C
ATOM 12 O2' A B 235 93.260 123.264 -6.914 1.00 63.26 O
ATOM 13 C1' A B 235 91.728 121.443 -6.473 1.00 62.66 C
ATOM 14 N9 A B 235 92.297 120.756 -5.315 1.00 60.06 N
ATOM 15 C8 A B 235 92.942 119.545 -5.265 1.00 60.18 C
ATOM 16 N7 A B 235 93.372 119.226 -4.071 1.00 57.72 N
ATOM 17 C5 A B 235 92.976 120.295 -3.278 1.00 58.23 C
ATOM 18 C6 A B 235 93.136 120.570 -1.906 1.00 55.39 C
ATOM 19 N6 A B 235 93.772 119.760 -1.058 1.00 53.12 N
ATOM 20 N1 A B 235 92.617 121.721 -1.433 1.00 53.66 N
ATOM 21 C2 A B 235 91.985 122.535 -2.280 1.00 55.78 C
ATOM 22 N3 A B 235 91.773 122.391 -3.586 1.00 58.67 N
ATOM 23 C4 A B 235 92.302 121.237 -4.029 1.00 58.34 C
ATOM 24 P A B 236 90.610 124.015 -9.949 1.00 67.17 P
ATOM 25 OP1 A B 236 91.692 123.865 -10.958 1.00 67.76 O
ATOM 26 OP2 A B 236 90.145 125.372 -9.563 1.00 68.37 O
ATOM 27 O5' A B 236 89.341 123.170 -10.418 1.00 65.49 O
TER
ATOM 2 P U A 253 89.560 118.675 3.882 1.00 52.63 P
ATOM 3 OP1 U A 253 89.847 119.211 5.236 1.00 51.53 O
ATOM 4 OP2 U A 253 89.111 117.272 3.734 1.00 52.59 O
ATOM 5 O5' U A 253 88.508 119.631 3.158 1.00 52.46 O
ATOM 6 C5' U A 253 88.342 121.007 3.570 1.00 53.13 C
ATOM 7 C4' U A 253 87.940 121.858 2.392 1.00 54.39 C
ATOM 8 O4' U A 253 89.066 122.005 1.486 1.00 54.79 O
ATOM 9 C3' U A 253 86.851 121.244 1.533 1.00 54.82 C
ATOM 10 O3' U A 253 85.558 121.470 2.064 1.00 54.50 O
ATOM 11 C2' U A 253 87.080 121.906 0.183 1.00 53.05 C
ATOM 12 O2' U A 253 86.546 123.210 0.117 1.00 52.25 O
ATOM 13 C1' U A 253 88.609 121.961 0.141 1.00 52.84 C
ATOM 14 N1 U A 253 89.228 120.795 -0.517 1.00 52.04 N
ATOM 15 C2 U A 253 89.041 120.637 -1.885 1.00 51.15 C
ATOM 16 O2 U A 253 88.393 121.416 -2.565 1.00 52.58 O
ATOM 17 N3 U A 253 89.641 119.531 -2.426 1.00 49.60 N
ATOM 18 C4 U A 253 90.397 118.592 -1.763 1.00 52.14 C
ATOM 19 O4 U A 253 90.875 117.648 -2.391 1.00 52.44 O
ATOM 20 C5 U A 253 90.549 118.827 -0.357 1.00 51.86 C
ATOM 21 C6 U A 253 89.973 119.889 0.200 1.00 49.83 C
ATOM 22 P G A 254 84.487 120.279 2.045 1.00 55.87 P
ATOM 23 OP1 G A 254 83.193 120.857 2.506 1.00 55.78 O
ATOM 24 OP2 G A 254 85.073 119.107 2.747 1.00 56.03 O
ATOM 25 O5' G A 254 84.370 119.881 0.503 1.00 58.65 O
TER
ATOM 1 O3' G B 234 93.514 117.303 -8.176 1.00 68.45 O
ATOM 2 P A B 235 93.944 118.262 -9.390 1.00 68.55 P
ATOM 3 OP1 A B 235 93.409 117.665 -10.643 1.00 69.92 O
ATOM 4 OP2 A B 235 95.402 118.518 -9.269 1.00 67.58 O
ATOM 5 O5' A B 235 93.144 119.608 -9.108 1.00 67.23 O
ATOM 6 C5' A B 235 91.740 119.722 -9.429 1.00 64.45 C
ATOM 7 C4' A B 235 91.132 120.874 -8.666 1.00 65.25 C
ATOM 8 O4' A B 235 91.005 120.517 -7.257 1.00 64.00 O
ATOM 9 C3' A B 235 91.963 122.155 -8.699 1.00 64.58 C
ATOM 10 O3' A B 235 91.098 123.279 -8.611 1.00 66.77 O
ATOM 11 C2' A B 235 92.773 122.038 -7.413 1.00 63.15 C
ATOM 12 O2' A B 235 93.260 123.264 -6.914 1.00 63.26 O
ATOM 13 C1' A B 235 91.728 121.443 -6.473 1.00 62.66 C
ATOM 14 N9 A B 235 92.297 120.756 -5.315 1.00 60.06 N
ATOM 15 C8 A B 235 92.942 119.545 -5.265 1.00 60.18 C
ATOM 16 N7 A B 235 93.372 119.226 -4.071 1.00 57.72 N
ATOM 17 C5 A B 235 92.976 120.295 -3.278 1.00 58.23 C
ATOM 18 C6 A B 235 93.136 120.570 -1.906 1.00 55.39 C
ATOM 19 N6 A B 235 93.772 119.760 -1.058 1.00 53.12 N
ATOM 20 N1 A B 235 92.617 121.721 -1.433 1.00 53.66 N
ATOM 21 C2 A B 235 91.985 122.535 -2.280 1.00 55.78 C
ATOM 22 N3 A B 235 91.773 122.391 -3.586 1.00 58.67 N
ATOM 23 C4 A B 235 92.302 121.237 -4.029 1.00 58.34 C
ATOM 24 P A B 236 90.610 124.015 -9.949 1.00 67.17 P
ATOM 25 OP1 A B 236 91.692 123.865 -10.958 1.00 67.76 O
ATOM 26 OP2 A B 236 90.145 125.372 -9.563 1.00 68.37 O
ATOM 27 O5' A B 236 89.341 123.170 -10.418 1.00 65.49 O
TER
Atoms:
C4: (90.397,118.592,-1.763)
N3: (89.641,119.531,-2.426)
OP1: (89.847,119.211,5.236)
OP2: (89.111,117.272,3.734)
C2: (89.041,120.637,-1.885)
C1': (88.609,121.961,0.141)
C3': (86.851,121.244,1.533)
O5': (88.508,119.631,3.158)
O4': (89.066,122.005,1.486)
C5': (88.342,121.007,3.570)
P: (89.560,118.675,3.882)
C4': (87.940,121.858,2.392)
C2': (87.080,121.906,0.183)
O2': (86.546,123.210,0.117)
N1: (89.228,120.795,-0.517)
O4: (90.875,117.648,-2.391)
O2: (88.393,121.416,-2.565)
C6: (89.973,119.889,0.200)
C5: (90.549,118.827,-0.357)
O3': (85.558,121.470,2.064)
N3: (89.641,119.531,-2.426)
OP1: (89.847,119.211,5.236)
OP2: (89.111,117.272,3.734)
C2: (89.041,120.637,-1.885)
C1': (88.609,121.961,0.141)
C3': (86.851,121.244,1.533)
O5': (88.508,119.631,3.158)
O4': (89.066,122.005,1.486)
C5': (88.342,121.007,3.570)
P: (89.560,118.675,3.882)
C4': (87.940,121.858,2.392)
C2': (87.080,121.906,0.183)
O2': (86.546,123.210,0.117)
N1: (89.228,120.795,-0.517)
O4: (90.875,117.648,-2.391)
O2: (88.393,121.416,-2.565)
C6: (89.973,119.889,0.200)
C5: (90.549,118.827,-0.357)
O3': (85.558,121.470,2.064)
OP1: (93.409,117.665,-10.643)
OP2: (95.402,118.518,-9.269)
C3': (91.963,122.155,-8.699)
C1': (91.728,121.443,-6.473)
C5': (91.740,119.722,-9.429)
O4': (91.005,120.517,-7.257)
C8: (92.942,119.545,-5.265)
O2': (93.260,123.264,-6.914)
C6: (93.136,120.570,-1.906)
C5: (92.976,120.295,-3.278)
C4: (92.302,121.237,-4.029)
P: (93.944,118.262,-9.390)
C4': (91.132,120.874,-8.666)
C2': (92.773,122.038,-7.413)
C2: (91.985,122.535,-2.280)
N1: (92.617,121.721,-1.433)
N3: (91.773,122.391,-3.586)
N6: (93.772,119.760,-1.058)
N7: (93.372,119.226,-4.071)
N9: (92.297,120.756,-5.315)
O5': (93.144,119.608,-9.108)
O3': (91.098,123.279,-8.611)
OP2: (95.402,118.518,-9.269)
C3': (91.963,122.155,-8.699)
C1': (91.728,121.443,-6.473)
C5': (91.740,119.722,-9.429)
O4': (91.005,120.517,-7.257)
C8: (92.942,119.545,-5.265)
O2': (93.260,123.264,-6.914)
C6: (93.136,120.570,-1.906)
C5: (92.976,120.295,-3.278)
C4: (92.302,121.237,-4.029)
P: (93.944,118.262,-9.390)
C4': (91.132,120.874,-8.666)
C2': (92.773,122.038,-7.413)
C2: (91.985,122.535,-2.280)
N1: (92.617,121.721,-1.433)
N3: (91.773,122.391,-3.586)
N6: (93.772,119.760,-1.058)
N7: (93.372,119.226,-4.071)
N9: (92.297,120.756,-5.315)
O5': (93.144,119.608,-9.108)
O3': (91.098,123.279,-8.611)
Image (generated by PyMOL):