Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JJ2:02020:02021
Extra
PDB:
ATOM 1 O3' G A2019 49.760 118.241 105.429 1.00 24.72 O
ATOM 2 P A A2020 48.215 118.181 105.017 1.00 27.66 P
ATOM 3 OP1 A A2020 47.478 117.642 106.192 1.00 28.64 O
ATOM 4 OP2 A A2020 48.107 117.494 103.712 1.00 26.37 O
ATOM 5 O5' A A2020 47.814 119.702 104.798 1.00 28.45 O
ATOM 6 C5' A A2020 47.215 120.470 105.846 1.00 27.37 C
ATOM 7 C4' A A2020 45.880 120.993 105.390 1.00 29.47 C
ATOM 8 O4' A A2020 45.030 119.869 105.029 1.00 29.88 O
ATOM 9 C3' A A2020 45.106 121.787 106.433 1.00 30.22 C
ATOM 10 O3' A A2020 44.261 122.732 105.769 1.00 35.86 O
ATOM 11 C2' A A2020 44.222 120.711 107.051 1.00 29.67 C
ATOM 12 O2' A A2020 43.076 121.255 107.667 1.00 31.72 O
ATOM 13 C1' A A2020 43.855 119.908 105.805 1.00 29.17 C
ATOM 14 N9 A A2020 43.367 118.540 105.992 1.00 27.68 N
ATOM 15 C8 A A2020 43.775 117.572 106.873 1.00 26.02 C
ATOM 16 N7 A A2020 43.113 116.443 106.761 1.00 26.38 N
ATOM 17 C5 A A2020 42.205 116.687 105.740 1.00 26.58 C
ATOM 18 C6 A A2020 41.205 115.889 105.133 1.00 26.57 C
ATOM 19 N6 A A2020 40.914 114.636 105.499 1.00 25.02 N
ATOM 20 N1 A A2020 40.498 116.438 104.123 1.00 29.36 N
ATOM 21 C2 A A2020 40.762 117.702 103.766 1.00 27.46 C
ATOM 22 N3 A A2020 41.651 118.550 104.268 1.00 25.92 N
ATOM 23 C4 A A2020 42.353 117.975 105.257 1.00 26.94 C
ATOM 24 P G A2021 44.853 124.140 105.255 1.00 37.35 P
ATOM 25 OP1 G A2021 44.895 124.074 103.769 1.00 37.02 O
ATOM 26 OP2 G A2021 46.084 124.464 106.006 1.00 37.27 O
ATOM 27 O5' G A2021 43.728 125.189 105.666 1.00 34.66 O
TER
ATOM 1 O3' A B2020 44.261 122.732 105.769 1.00 35.86 O
ATOM 2 P G B2021 44.853 124.140 105.255 1.00 37.35 P
ATOM 3 OP1 G B2021 44.895 124.074 103.769 1.00 37.02 O
ATOM 4 OP2 G B2021 46.084 124.464 106.006 1.00 37.27 O
ATOM 5 O5' G B2021 43.728 125.189 105.666 1.00 34.66 O
ATOM 6 C5' G B2021 43.304 125.316 107.040 1.00 32.08 C
ATOM 7 C4' G B2021 41.889 125.841 107.105 1.00 29.17 C
ATOM 8 O4' G B2021 41.843 127.129 106.441 1.00 27.51 O
ATOM 9 C3' G B2021 40.836 124.992 106.409 1.00 26.30 C
ATOM 10 O3' G B2021 40.311 124.000 107.296 1.00 29.25 O
ATOM 11 C2' G B2021 39.790 126.029 106.034 1.00 26.91 C
ATOM 12 O2' G B2021 38.977 126.397 107.132 1.00 21.84 O
ATOM 13 C1' G B2021 40.674 127.220 105.658 1.00 25.63 C
ATOM 14 N9 G B2021 41.091 127.272 104.258 1.00 27.16 N
ATOM 15 C8 G B2021 42.381 127.369 103.792 1.00 26.80 C
ATOM 16 N7 G B2021 42.454 127.463 102.495 1.00 25.67 N
ATOM 17 C5 G B2021 41.136 127.413 102.073 1.00 25.82 C
ATOM 18 C6 G B2021 40.598 127.479 100.773 1.00 25.94 C
ATOM 19 O6 G B2021 41.200 127.634 99.705 1.00 27.89 O
ATOM 20 N1 G B2021 39.212 127.355 100.786 1.00 24.20 N
ATOM 21 C2 G B2021 38.445 127.204 101.921 1.00 24.38 C
ATOM 22 N2 G B2021 37.123 127.080 101.738 1.00 24.28 N
ATOM 23 N3 G B2021 38.940 127.170 103.144 1.00 22.36 N
ATOM 24 C4 G B2021 40.281 127.274 103.146 1.00 25.45 C
ATOM 25 P U B2022 40.039 122.507 106.760 1.00 28.32 P
ATOM 26 OP1 U B2022 39.585 121.695 107.899 1.00 30.75 O
ATOM 27 OP2 U B2022 41.235 122.076 105.994 1.00 31.50 O
ATOM 28 O5' U B2022 38.851 122.670 105.718 1.00 28.28 O
TER
ATOM 2 P A A2020 48.215 118.181 105.017 1.00 27.66 P
ATOM 3 OP1 A A2020 47.478 117.642 106.192 1.00 28.64 O
ATOM 4 OP2 A A2020 48.107 117.494 103.712 1.00 26.37 O
ATOM 5 O5' A A2020 47.814 119.702 104.798 1.00 28.45 O
ATOM 6 C5' A A2020 47.215 120.470 105.846 1.00 27.37 C
ATOM 7 C4' A A2020 45.880 120.993 105.390 1.00 29.47 C
ATOM 8 O4' A A2020 45.030 119.869 105.029 1.00 29.88 O
ATOM 9 C3' A A2020 45.106 121.787 106.433 1.00 30.22 C
ATOM 10 O3' A A2020 44.261 122.732 105.769 1.00 35.86 O
ATOM 11 C2' A A2020 44.222 120.711 107.051 1.00 29.67 C
ATOM 12 O2' A A2020 43.076 121.255 107.667 1.00 31.72 O
ATOM 13 C1' A A2020 43.855 119.908 105.805 1.00 29.17 C
ATOM 14 N9 A A2020 43.367 118.540 105.992 1.00 27.68 N
ATOM 15 C8 A A2020 43.775 117.572 106.873 1.00 26.02 C
ATOM 16 N7 A A2020 43.113 116.443 106.761 1.00 26.38 N
ATOM 17 C5 A A2020 42.205 116.687 105.740 1.00 26.58 C
ATOM 18 C6 A A2020 41.205 115.889 105.133 1.00 26.57 C
ATOM 19 N6 A A2020 40.914 114.636 105.499 1.00 25.02 N
ATOM 20 N1 A A2020 40.498 116.438 104.123 1.00 29.36 N
ATOM 21 C2 A A2020 40.762 117.702 103.766 1.00 27.46 C
ATOM 22 N3 A A2020 41.651 118.550 104.268 1.00 25.92 N
ATOM 23 C4 A A2020 42.353 117.975 105.257 1.00 26.94 C
ATOM 24 P G A2021 44.853 124.140 105.255 1.00 37.35 P
ATOM 25 OP1 G A2021 44.895 124.074 103.769 1.00 37.02 O
ATOM 26 OP2 G A2021 46.084 124.464 106.006 1.00 37.27 O
ATOM 27 O5' G A2021 43.728 125.189 105.666 1.00 34.66 O
TER
ATOM 1 O3' A B2020 44.261 122.732 105.769 1.00 35.86 O
ATOM 2 P G B2021 44.853 124.140 105.255 1.00 37.35 P
ATOM 3 OP1 G B2021 44.895 124.074 103.769 1.00 37.02 O
ATOM 4 OP2 G B2021 46.084 124.464 106.006 1.00 37.27 O
ATOM 5 O5' G B2021 43.728 125.189 105.666 1.00 34.66 O
ATOM 6 C5' G B2021 43.304 125.316 107.040 1.00 32.08 C
ATOM 7 C4' G B2021 41.889 125.841 107.105 1.00 29.17 C
ATOM 8 O4' G B2021 41.843 127.129 106.441 1.00 27.51 O
ATOM 9 C3' G B2021 40.836 124.992 106.409 1.00 26.30 C
ATOM 10 O3' G B2021 40.311 124.000 107.296 1.00 29.25 O
ATOM 11 C2' G B2021 39.790 126.029 106.034 1.00 26.91 C
ATOM 12 O2' G B2021 38.977 126.397 107.132 1.00 21.84 O
ATOM 13 C1' G B2021 40.674 127.220 105.658 1.00 25.63 C
ATOM 14 N9 G B2021 41.091 127.272 104.258 1.00 27.16 N
ATOM 15 C8 G B2021 42.381 127.369 103.792 1.00 26.80 C
ATOM 16 N7 G B2021 42.454 127.463 102.495 1.00 25.67 N
ATOM 17 C5 G B2021 41.136 127.413 102.073 1.00 25.82 C
ATOM 18 C6 G B2021 40.598 127.479 100.773 1.00 25.94 C
ATOM 19 O6 G B2021 41.200 127.634 99.705 1.00 27.89 O
ATOM 20 N1 G B2021 39.212 127.355 100.786 1.00 24.20 N
ATOM 21 C2 G B2021 38.445 127.204 101.921 1.00 24.38 C
ATOM 22 N2 G B2021 37.123 127.080 101.738 1.00 24.28 N
ATOM 23 N3 G B2021 38.940 127.170 103.144 1.00 22.36 N
ATOM 24 C4 G B2021 40.281 127.274 103.146 1.00 25.45 C
ATOM 25 P U B2022 40.039 122.507 106.760 1.00 28.32 P
ATOM 26 OP1 U B2022 39.585 121.695 107.899 1.00 30.75 O
ATOM 27 OP2 U B2022 41.235 122.076 105.994 1.00 31.50 O
ATOM 28 O5' U B2022 38.851 122.670 105.718 1.00 28.28 O
TER
Atoms:
OP1: (47.478,117.642,106.192)
OP2: (48.107,117.494,103.712)
C3': (45.106,121.787,106.433)
C1': (43.855,119.908,105.805)
C5': (47.215,120.470,105.846)
O4': (45.030,119.869,105.029)
C8: (43.775,117.572,106.873)
O2': (43.076,121.255,107.667)
C6: (41.205,115.889,105.133)
C5: (42.205,116.687,105.740)
C4: (42.353,117.975,105.257)
P: (48.215,118.181,105.017)
C4': (45.880,120.993,105.390)
C2': (44.222,120.711,107.051)
C2: (40.762,117.702,103.766)
N1: (40.498,116.438,104.123)
N3: (41.651,118.550,104.268)
N6: (40.914,114.636,105.499)
N7: (43.113,116.443,106.761)
N9: (43.367,118.540,105.992)
O5': (47.814,119.702,104.798)
O3': (44.261,122.732,105.769)
OP2: (48.107,117.494,103.712)
C3': (45.106,121.787,106.433)
C1': (43.855,119.908,105.805)
C5': (47.215,120.470,105.846)
O4': (45.030,119.869,105.029)
C8: (43.775,117.572,106.873)
O2': (43.076,121.255,107.667)
C6: (41.205,115.889,105.133)
C5: (42.205,116.687,105.740)
C4: (42.353,117.975,105.257)
P: (48.215,118.181,105.017)
C4': (45.880,120.993,105.390)
C2': (44.222,120.711,107.051)
C2: (40.762,117.702,103.766)
N1: (40.498,116.438,104.123)
N3: (41.651,118.550,104.268)
N6: (40.914,114.636,105.499)
N7: (43.113,116.443,106.761)
N9: (43.367,118.540,105.992)
O5': (47.814,119.702,104.798)
O3': (44.261,122.732,105.769)
OP1: (44.895,124.074,103.769)
OP2: (46.084,124.464,106.006)
C3': (40.836,124.992,106.409)
C1': (40.674,127.220,105.658)
C5': (43.304,125.316,107.040)
O6: (41.200,127.634,99.705)
O4': (41.843,127.129,106.441)
C8: (42.381,127.369,103.792)
C2: (38.445,127.204,101.921)
C6: (40.598,127.479,100.773)
C5: (41.136,127.413,102.073)
C4: (40.281,127.274,103.146)
P: (44.853,124.140,105.255)
C4': (41.889,125.841,107.105)
C2': (39.790,126.029,106.034)
O2': (38.977,126.397,107.132)
N1: (39.212,127.355,100.786)
N2: (37.123,127.080,101.738)
N3: (38.940,127.170,103.144)
N7: (42.454,127.463,102.495)
N9: (41.091,127.272,104.258)
O5': (43.728,125.189,105.666)
O3': (40.311,124.000,107.296)
OP2: (46.084,124.464,106.006)
C3': (40.836,124.992,106.409)
C1': (40.674,127.220,105.658)
C5': (43.304,125.316,107.040)
O6: (41.200,127.634,99.705)
O4': (41.843,127.129,106.441)
C8: (42.381,127.369,103.792)
C2: (38.445,127.204,101.921)
C6: (40.598,127.479,100.773)
C5: (41.136,127.413,102.073)
C4: (40.281,127.274,103.146)
P: (44.853,124.140,105.255)
C4': (41.889,125.841,107.105)
C2': (39.790,126.029,106.034)
O2': (38.977,126.397,107.132)
N1: (39.212,127.355,100.786)
N2: (37.123,127.080,101.738)
N3: (38.940,127.170,103.144)
N7: (42.454,127.463,102.495)
N9: (41.091,127.272,104.258)
O5': (43.728,125.189,105.666)
O3': (40.311,124.000,107.296)
Image (generated by PyMOL):