Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K9M:A2020:A2021
Extra
PDB:
ATOM 1 O3' G A2019 49.922 118.621 106.022 1.00 31.74 O
ATOM 2 P A A2020 48.364 118.586 105.711 1.00 29.42 P
ATOM 3 OP1 A A2020 47.638 118.167 106.931 1.00 27.18 O
ATOM 4 OP2 A A2020 48.208 117.825 104.476 1.00 30.15 O
ATOM 5 O5' A A2020 48.029 120.098 105.389 1.00 30.02 O
ATOM 6 C5' A A2020 47.399 120.923 106.363 1.00 30.68 C
ATOM 7 C4' A A2020 46.039 121.290 105.862 1.00 32.54 C
ATOM 8 O4' A A2020 45.268 120.099 105.524 1.00 31.41 O
ATOM 9 C3' A A2020 45.208 122.070 106.864 1.00 33.28 C
ATOM 10 O3' A A2020 44.421 123.004 106.151 1.00 34.39 O
ATOM 11 C2' A A2020 44.297 121.000 107.445 1.00 33.25 C
ATOM 12 O2' A A2020 43.080 121.477 107.966 1.00 33.98 O
ATOM 13 C1' A A2020 44.036 120.163 106.206 1.00 32.34 C
ATOM 14 N9 A A2020 43.532 118.829 106.484 1.00 32.30 N
ATOM 15 C8 A A2020 43.884 117.953 107.463 1.00 33.52 C
ATOM 16 N7 A A2020 43.194 116.840 107.442 1.00 33.81 N
ATOM 17 C5 A A2020 42.340 117.002 106.361 1.00 32.09 C
ATOM 18 C6 A A2020 41.363 116.186 105.793 1.00 32.82 C
ATOM 19 N6 A A2020 41.051 114.975 106.241 1.00 31.36 N
ATOM 20 N1 A A2020 40.701 116.663 104.726 1.00 33.76 N
ATOM 21 C2 A A2020 41.009 117.880 104.275 1.00 32.58 C
ATOM 22 N3 A A2020 41.906 118.730 104.722 1.00 33.55 N
ATOM 23 C4 A A2020 42.541 118.223 105.774 1.00 31.88 C
ATOM 24 P G A2021 45.066 124.375 105.661 1.00 35.08 P
ATOM 25 OP1 G A2021 45.218 124.288 104.196 1.00 33.94 O
ATOM 26 OP2 G A2021 46.228 124.724 106.498 1.00 37.06 O
ATOM 27 O5' G A2021 43.946 125.427 106.033 1.00 35.77 O
TER
ATOM 1 O3' A B2020 44.421 123.004 106.151 1.00 34.39 O
ATOM 2 P G B2021 45.066 124.375 105.661 1.00 35.08 P
ATOM 3 OP1 G B2021 45.218 124.288 104.196 1.00 33.94 O
ATOM 4 OP2 G B2021 46.228 124.724 106.498 1.00 37.06 O
ATOM 5 O5' G B2021 43.946 125.427 106.033 1.00 35.77 O
ATOM 6 C5' G B2021 43.550 125.589 107.383 1.00 35.05 C
ATOM 7 C4' G B2021 42.132 126.087 107.452 1.00 36.54 C
ATOM 8 O4' G B2021 42.073 127.402 106.842 1.00 36.70 O
ATOM 9 C3' G B2021 41.078 125.264 106.734 1.00 34.68 C
ATOM 10 O3' G B2021 40.584 124.239 107.590 1.00 32.79 O
ATOM 11 C2' G B2021 40.014 126.315 106.439 1.00 34.70 C
ATOM 12 O2' G B2021 39.288 126.583 107.630 1.00 33.79 O
ATOM 13 C1' G B2021 40.869 127.542 106.103 1.00 34.36 C
ATOM 14 N9 G B2021 41.249 127.651 104.696 1.00 33.47 N
ATOM 15 C8 G B2021 42.541 127.759 104.236 1.00 35.17 C
ATOM 16 N7 G B2021 42.627 127.821 102.939 1.00 34.60 N
ATOM 17 C5 G B2021 41.312 127.774 102.503 1.00 33.58 C
ATOM 18 C6 G B2021 40.800 127.802 101.198 1.00 33.57 C
ATOM 19 O6 G B2021 41.425 127.918 100.142 1.00 33.90 O
ATOM 20 N1 G B2021 39.412 127.674 101.185 1.00 32.72 N
ATOM 21 C2 G B2021 38.619 127.545 102.300 1.00 31.66 C
ATOM 22 N2 G B2021 37.308 127.394 102.079 1.00 30.00 N
ATOM 23 N3 G B2021 39.087 127.551 103.543 1.00 31.87 N
ATOM 24 C4 G B2021 40.439 127.660 103.572 1.00 33.09 C
ATOM 25 P U B2022 40.344 122.766 107.000 1.00 33.33 P
ATOM 26 OP1 U B2022 39.907 121.892 108.086 1.00 32.45 O
ATOM 27 OP2 U B2022 41.544 122.399 106.201 1.00 32.56 O
ATOM 28 O5' U B2022 39.134 122.928 105.980 1.00 33.79 O
TER
ATOM 2 P A A2020 48.364 118.586 105.711 1.00 29.42 P
ATOM 3 OP1 A A2020 47.638 118.167 106.931 1.00 27.18 O
ATOM 4 OP2 A A2020 48.208 117.825 104.476 1.00 30.15 O
ATOM 5 O5' A A2020 48.029 120.098 105.389 1.00 30.02 O
ATOM 6 C5' A A2020 47.399 120.923 106.363 1.00 30.68 C
ATOM 7 C4' A A2020 46.039 121.290 105.862 1.00 32.54 C
ATOM 8 O4' A A2020 45.268 120.099 105.524 1.00 31.41 O
ATOM 9 C3' A A2020 45.208 122.070 106.864 1.00 33.28 C
ATOM 10 O3' A A2020 44.421 123.004 106.151 1.00 34.39 O
ATOM 11 C2' A A2020 44.297 121.000 107.445 1.00 33.25 C
ATOM 12 O2' A A2020 43.080 121.477 107.966 1.00 33.98 O
ATOM 13 C1' A A2020 44.036 120.163 106.206 1.00 32.34 C
ATOM 14 N9 A A2020 43.532 118.829 106.484 1.00 32.30 N
ATOM 15 C8 A A2020 43.884 117.953 107.463 1.00 33.52 C
ATOM 16 N7 A A2020 43.194 116.840 107.442 1.00 33.81 N
ATOM 17 C5 A A2020 42.340 117.002 106.361 1.00 32.09 C
ATOM 18 C6 A A2020 41.363 116.186 105.793 1.00 32.82 C
ATOM 19 N6 A A2020 41.051 114.975 106.241 1.00 31.36 N
ATOM 20 N1 A A2020 40.701 116.663 104.726 1.00 33.76 N
ATOM 21 C2 A A2020 41.009 117.880 104.275 1.00 32.58 C
ATOM 22 N3 A A2020 41.906 118.730 104.722 1.00 33.55 N
ATOM 23 C4 A A2020 42.541 118.223 105.774 1.00 31.88 C
ATOM 24 P G A2021 45.066 124.375 105.661 1.00 35.08 P
ATOM 25 OP1 G A2021 45.218 124.288 104.196 1.00 33.94 O
ATOM 26 OP2 G A2021 46.228 124.724 106.498 1.00 37.06 O
ATOM 27 O5' G A2021 43.946 125.427 106.033 1.00 35.77 O
TER
ATOM 1 O3' A B2020 44.421 123.004 106.151 1.00 34.39 O
ATOM 2 P G B2021 45.066 124.375 105.661 1.00 35.08 P
ATOM 3 OP1 G B2021 45.218 124.288 104.196 1.00 33.94 O
ATOM 4 OP2 G B2021 46.228 124.724 106.498 1.00 37.06 O
ATOM 5 O5' G B2021 43.946 125.427 106.033 1.00 35.77 O
ATOM 6 C5' G B2021 43.550 125.589 107.383 1.00 35.05 C
ATOM 7 C4' G B2021 42.132 126.087 107.452 1.00 36.54 C
ATOM 8 O4' G B2021 42.073 127.402 106.842 1.00 36.70 O
ATOM 9 C3' G B2021 41.078 125.264 106.734 1.00 34.68 C
ATOM 10 O3' G B2021 40.584 124.239 107.590 1.00 32.79 O
ATOM 11 C2' G B2021 40.014 126.315 106.439 1.00 34.70 C
ATOM 12 O2' G B2021 39.288 126.583 107.630 1.00 33.79 O
ATOM 13 C1' G B2021 40.869 127.542 106.103 1.00 34.36 C
ATOM 14 N9 G B2021 41.249 127.651 104.696 1.00 33.47 N
ATOM 15 C8 G B2021 42.541 127.759 104.236 1.00 35.17 C
ATOM 16 N7 G B2021 42.627 127.821 102.939 1.00 34.60 N
ATOM 17 C5 G B2021 41.312 127.774 102.503 1.00 33.58 C
ATOM 18 C6 G B2021 40.800 127.802 101.198 1.00 33.57 C
ATOM 19 O6 G B2021 41.425 127.918 100.142 1.00 33.90 O
ATOM 20 N1 G B2021 39.412 127.674 101.185 1.00 32.72 N
ATOM 21 C2 G B2021 38.619 127.545 102.300 1.00 31.66 C
ATOM 22 N2 G B2021 37.308 127.394 102.079 1.00 30.00 N
ATOM 23 N3 G B2021 39.087 127.551 103.543 1.00 31.87 N
ATOM 24 C4 G B2021 40.439 127.660 103.572 1.00 33.09 C
ATOM 25 P U B2022 40.344 122.766 107.000 1.00 33.33 P
ATOM 26 OP1 U B2022 39.907 121.892 108.086 1.00 32.45 O
ATOM 27 OP2 U B2022 41.544 122.399 106.201 1.00 32.56 O
ATOM 28 O5' U B2022 39.134 122.928 105.980 1.00 33.79 O
TER
Atoms:
OP1: (47.638,118.167,106.931)
OP2: (48.208,117.825,104.476)
C3': (45.208,122.070,106.864)
C1': (44.036,120.163,106.206)
C5': (47.399,120.923,106.363)
O4': (45.268,120.099,105.524)
C8: (43.884,117.953,107.463)
O2': (43.080,121.477,107.966)
C6: (41.363,116.186,105.793)
C5: (42.340,117.002,106.361)
C4: (42.541,118.223,105.774)
P: (48.364,118.586,105.711)
C4': (46.039,121.290,105.862)
C2': (44.297,121.000,107.445)
C2: (41.009,117.880,104.275)
N1: (40.701,116.663,104.726)
N3: (41.906,118.730,104.722)
N6: (41.051,114.975,106.241)
N7: (43.194,116.840,107.442)
N9: (43.532,118.829,106.484)
O5': (48.029,120.098,105.389)
O3': (44.421,123.004,106.151)
OP2: (48.208,117.825,104.476)
C3': (45.208,122.070,106.864)
C1': (44.036,120.163,106.206)
C5': (47.399,120.923,106.363)
O4': (45.268,120.099,105.524)
C8: (43.884,117.953,107.463)
O2': (43.080,121.477,107.966)
C6: (41.363,116.186,105.793)
C5: (42.340,117.002,106.361)
C4: (42.541,118.223,105.774)
P: (48.364,118.586,105.711)
C4': (46.039,121.290,105.862)
C2': (44.297,121.000,107.445)
C2: (41.009,117.880,104.275)
N1: (40.701,116.663,104.726)
N3: (41.906,118.730,104.722)
N6: (41.051,114.975,106.241)
N7: (43.194,116.840,107.442)
N9: (43.532,118.829,106.484)
O5': (48.029,120.098,105.389)
O3': (44.421,123.004,106.151)
OP1: (45.218,124.288,104.196)
OP2: (46.228,124.724,106.498)
C3': (41.078,125.264,106.734)
C1': (40.869,127.542,106.103)
C5': (43.550,125.589,107.383)
O6: (41.425,127.918,100.142)
O4': (42.073,127.402,106.842)
C8: (42.541,127.759,104.236)
C2: (38.619,127.545,102.300)
C6: (40.800,127.802,101.198)
C5: (41.312,127.774,102.503)
C4: (40.439,127.660,103.572)
P: (45.066,124.375,105.661)
C4': (42.132,126.087,107.452)
C2': (40.014,126.315,106.439)
O2': (39.288,126.583,107.630)
N1: (39.412,127.674,101.185)
N2: (37.308,127.394,102.079)
N3: (39.087,127.551,103.543)
N7: (42.627,127.821,102.939)
N9: (41.249,127.651,104.696)
O5': (43.946,125.427,106.033)
O3': (40.584,124.239,107.590)
OP2: (46.228,124.724,106.498)
C3': (41.078,125.264,106.734)
C1': (40.869,127.542,106.103)
C5': (43.550,125.589,107.383)
O6: (41.425,127.918,100.142)
O4': (42.073,127.402,106.842)
C8: (42.541,127.759,104.236)
C2: (38.619,127.545,102.300)
C6: (40.800,127.802,101.198)
C5: (41.312,127.774,102.503)
C4: (40.439,127.660,103.572)
P: (45.066,124.375,105.661)
C4': (42.132,126.087,107.452)
C2': (40.014,126.315,106.439)
O2': (39.288,126.583,107.630)
N1: (39.412,127.674,101.185)
N2: (37.308,127.394,102.079)
N3: (39.087,127.551,103.543)
N7: (42.627,127.821,102.939)
N9: (41.249,127.651,104.696)
O5': (43.946,125.427,106.033)
O3': (40.584,124.239,107.590)
Image (generated by PyMOL):