Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A2020:A2021
Extra
PDB:
ATOM 1 O3' G A2019 49.790 118.515 105.296 1.00 29.04 O
ATOM 2 P A A2020 48.226 118.482 104.947 1.00 28.74 P
ATOM 3 OP1 A A2020 47.566 118.024 106.195 1.00 28.13 O
ATOM 4 OP2 A A2020 48.016 117.730 103.699 1.00 29.13 O
ATOM 5 O5' A A2020 47.826 119.997 104.654 1.00 28.13 O
ATOM 6 C5' A A2020 47.239 120.825 105.679 1.00 28.34 C
ATOM 7 C4' A A2020 45.867 121.286 105.253 1.00 28.54 C
ATOM 8 O4' A A2020 45.068 120.114 104.934 1.00 28.32 O
ATOM 9 C3' A A2020 45.058 122.068 106.287 1.00 28.63 C
ATOM 10 O3' A A2020 44.227 122.997 105.599 1.00 29.35 O
ATOM 11 C2' A A2020 44.201 120.964 106.898 1.00 29.30 C
ATOM 12 O2' A A2020 43.014 121.358 107.550 1.00 32.45 O
ATOM 13 C1' A A2020 43.867 120.171 105.653 1.00 27.80 C
ATOM 14 N9 A A2020 43.385 118.824 105.890 1.00 27.46 N
ATOM 15 C8 A A2020 43.768 117.880 106.807 1.00 28.04 C
ATOM 16 N7 A A2020 43.102 116.755 106.709 1.00 28.25 N
ATOM 17 C5 A A2020 42.231 116.979 105.652 1.00 28.44 C
ATOM 18 C6 A A2020 41.275 116.170 105.019 1.00 28.78 C
ATOM 19 N6 A A2020 41.019 114.908 105.366 1.00 27.50 N
ATOM 20 N1 A A2020 40.583 116.709 103.994 1.00 28.42 N
ATOM 21 C2 A A2020 40.841 117.969 103.640 1.00 28.63 C
ATOM 22 N3 A A2020 41.714 118.820 104.147 1.00 28.13 N
ATOM 23 C4 A A2020 42.387 118.255 105.156 1.00 27.91 C
ATOM 24 P G A2021 44.823 124.411 105.129 1.00 31.43 P
ATOM 25 OP1 G A2021 44.892 124.404 103.645 1.00 29.39 O
ATOM 26 OP2 G A2021 46.032 124.733 105.917 1.00 31.44 O
ATOM 27 O5' G A2021 43.706 125.444 105.582 1.00 29.26 O
TER
ATOM 1 O3' A B2020 44.227 122.997 105.599 1.00 29.35 O
ATOM 2 P G B2021 44.823 124.411 105.129 1.00 31.43 P
ATOM 3 OP1 G B2021 44.892 124.404 103.645 1.00 29.39 O
ATOM 4 OP2 G B2021 46.032 124.733 105.917 1.00 31.44 O
ATOM 5 O5' G B2021 43.706 125.444 105.582 1.00 29.26 O
ATOM 6 C5' G B2021 43.286 125.515 106.953 1.00 28.52 C
ATOM 7 C4' G B2021 41.897 126.088 107.028 1.00 27.67 C
ATOM 8 O4' G B2021 41.892 127.379 106.374 1.00 28.25 O
ATOM 9 C3' G B2021 40.860 125.282 106.272 1.00 25.96 C
ATOM 10 O3' G B2021 40.344 124.275 107.132 1.00 25.24 O
ATOM 11 C2' G B2021 39.814 126.335 105.953 1.00 26.36 C
ATOM 12 O2' G B2021 39.080 126.645 107.123 1.00 26.03 O
ATOM 13 C1' G B2021 40.701 127.537 105.619 1.00 27.35 C
ATOM 14 N9 G B2021 41.094 127.661 104.215 1.00 29.02 N
ATOM 15 C8 G B2021 42.378 127.830 103.767 1.00 30.35 C
ATOM 16 N7 G B2021 42.467 127.920 102.472 1.00 32.11 N
ATOM 17 C5 G B2021 41.165 127.805 102.026 1.00 30.39 C
ATOM 18 C6 G B2021 40.664 127.823 100.713 1.00 31.70 C
ATOM 19 O6 G B2021 41.299 127.941 99.653 1.00 32.08 O
ATOM 20 N1 G B2021 39.279 127.678 100.691 1.00 32.59 N
ATOM 21 C2 G B2021 38.484 127.526 101.803 1.00 31.46 C
ATOM 22 N2 G B2021 37.170 127.413 101.577 1.00 32.92 N
ATOM 23 N3 G B2021 38.950 127.495 103.047 1.00 31.51 N
ATOM 24 C4 G B2021 40.294 127.643 103.084 1.00 29.78 C
ATOM 25 P U B2022 40.125 122.795 106.577 1.00 26.73 P
ATOM 26 OP1 U B2022 39.716 121.996 107.737 1.00 26.16 O
ATOM 27 OP2 U B2022 41.334 122.396 105.795 1.00 26.67 O
ATOM 28 O5' U B2022 38.905 122.927 105.562 1.00 26.61 O
TER
ATOM 2 P A A2020 48.226 118.482 104.947 1.00 28.74 P
ATOM 3 OP1 A A2020 47.566 118.024 106.195 1.00 28.13 O
ATOM 4 OP2 A A2020 48.016 117.730 103.699 1.00 29.13 O
ATOM 5 O5' A A2020 47.826 119.997 104.654 1.00 28.13 O
ATOM 6 C5' A A2020 47.239 120.825 105.679 1.00 28.34 C
ATOM 7 C4' A A2020 45.867 121.286 105.253 1.00 28.54 C
ATOM 8 O4' A A2020 45.068 120.114 104.934 1.00 28.32 O
ATOM 9 C3' A A2020 45.058 122.068 106.287 1.00 28.63 C
ATOM 10 O3' A A2020 44.227 122.997 105.599 1.00 29.35 O
ATOM 11 C2' A A2020 44.201 120.964 106.898 1.00 29.30 C
ATOM 12 O2' A A2020 43.014 121.358 107.550 1.00 32.45 O
ATOM 13 C1' A A2020 43.867 120.171 105.653 1.00 27.80 C
ATOM 14 N9 A A2020 43.385 118.824 105.890 1.00 27.46 N
ATOM 15 C8 A A2020 43.768 117.880 106.807 1.00 28.04 C
ATOM 16 N7 A A2020 43.102 116.755 106.709 1.00 28.25 N
ATOM 17 C5 A A2020 42.231 116.979 105.652 1.00 28.44 C
ATOM 18 C6 A A2020 41.275 116.170 105.019 1.00 28.78 C
ATOM 19 N6 A A2020 41.019 114.908 105.366 1.00 27.50 N
ATOM 20 N1 A A2020 40.583 116.709 103.994 1.00 28.42 N
ATOM 21 C2 A A2020 40.841 117.969 103.640 1.00 28.63 C
ATOM 22 N3 A A2020 41.714 118.820 104.147 1.00 28.13 N
ATOM 23 C4 A A2020 42.387 118.255 105.156 1.00 27.91 C
ATOM 24 P G A2021 44.823 124.411 105.129 1.00 31.43 P
ATOM 25 OP1 G A2021 44.892 124.404 103.645 1.00 29.39 O
ATOM 26 OP2 G A2021 46.032 124.733 105.917 1.00 31.44 O
ATOM 27 O5' G A2021 43.706 125.444 105.582 1.00 29.26 O
TER
ATOM 1 O3' A B2020 44.227 122.997 105.599 1.00 29.35 O
ATOM 2 P G B2021 44.823 124.411 105.129 1.00 31.43 P
ATOM 3 OP1 G B2021 44.892 124.404 103.645 1.00 29.39 O
ATOM 4 OP2 G B2021 46.032 124.733 105.917 1.00 31.44 O
ATOM 5 O5' G B2021 43.706 125.444 105.582 1.00 29.26 O
ATOM 6 C5' G B2021 43.286 125.515 106.953 1.00 28.52 C
ATOM 7 C4' G B2021 41.897 126.088 107.028 1.00 27.67 C
ATOM 8 O4' G B2021 41.892 127.379 106.374 1.00 28.25 O
ATOM 9 C3' G B2021 40.860 125.282 106.272 1.00 25.96 C
ATOM 10 O3' G B2021 40.344 124.275 107.132 1.00 25.24 O
ATOM 11 C2' G B2021 39.814 126.335 105.953 1.00 26.36 C
ATOM 12 O2' G B2021 39.080 126.645 107.123 1.00 26.03 O
ATOM 13 C1' G B2021 40.701 127.537 105.619 1.00 27.35 C
ATOM 14 N9 G B2021 41.094 127.661 104.215 1.00 29.02 N
ATOM 15 C8 G B2021 42.378 127.830 103.767 1.00 30.35 C
ATOM 16 N7 G B2021 42.467 127.920 102.472 1.00 32.11 N
ATOM 17 C5 G B2021 41.165 127.805 102.026 1.00 30.39 C
ATOM 18 C6 G B2021 40.664 127.823 100.713 1.00 31.70 C
ATOM 19 O6 G B2021 41.299 127.941 99.653 1.00 32.08 O
ATOM 20 N1 G B2021 39.279 127.678 100.691 1.00 32.59 N
ATOM 21 C2 G B2021 38.484 127.526 101.803 1.00 31.46 C
ATOM 22 N2 G B2021 37.170 127.413 101.577 1.00 32.92 N
ATOM 23 N3 G B2021 38.950 127.495 103.047 1.00 31.51 N
ATOM 24 C4 G B2021 40.294 127.643 103.084 1.00 29.78 C
ATOM 25 P U B2022 40.125 122.795 106.577 1.00 26.73 P
ATOM 26 OP1 U B2022 39.716 121.996 107.737 1.00 26.16 O
ATOM 27 OP2 U B2022 41.334 122.396 105.795 1.00 26.67 O
ATOM 28 O5' U B2022 38.905 122.927 105.562 1.00 26.61 O
TER
Atoms:
OP1: (47.566,118.024,106.195)
OP2: (48.016,117.730,103.699)
C3': (45.058,122.068,106.287)
C1': (43.867,120.171,105.653)
C5': (47.239,120.825,105.679)
O4': (45.068,120.114,104.934)
C8: (43.768,117.880,106.807)
O2': (43.014,121.358,107.550)
C6: (41.275,116.170,105.019)
C5: (42.231,116.979,105.652)
C4: (42.387,118.255,105.156)
P: (48.226,118.482,104.947)
C4': (45.867,121.286,105.253)
C2': (44.201,120.964,106.898)
C2: (40.841,117.969,103.640)
N1: (40.583,116.709,103.994)
N3: (41.714,118.820,104.147)
N6: (41.019,114.908,105.366)
N7: (43.102,116.755,106.709)
N9: (43.385,118.824,105.890)
O5': (47.826,119.997,104.654)
O3': (44.227,122.997,105.599)
OP2: (48.016,117.730,103.699)
C3': (45.058,122.068,106.287)
C1': (43.867,120.171,105.653)
C5': (47.239,120.825,105.679)
O4': (45.068,120.114,104.934)
C8: (43.768,117.880,106.807)
O2': (43.014,121.358,107.550)
C6: (41.275,116.170,105.019)
C5: (42.231,116.979,105.652)
C4: (42.387,118.255,105.156)
P: (48.226,118.482,104.947)
C4': (45.867,121.286,105.253)
C2': (44.201,120.964,106.898)
C2: (40.841,117.969,103.640)
N1: (40.583,116.709,103.994)
N3: (41.714,118.820,104.147)
N6: (41.019,114.908,105.366)
N7: (43.102,116.755,106.709)
N9: (43.385,118.824,105.890)
O5': (47.826,119.997,104.654)
O3': (44.227,122.997,105.599)
OP1: (44.892,124.404,103.645)
OP2: (46.032,124.733,105.917)
C3': (40.860,125.282,106.272)
C1': (40.701,127.537,105.619)
C5': (43.286,125.515,106.953)
O6: (41.299,127.941,99.653)
O4': (41.892,127.379,106.374)
C8: (42.378,127.830,103.767)
C2: (38.484,127.526,101.803)
C6: (40.664,127.823,100.713)
C5: (41.165,127.805,102.026)
C4: (40.294,127.643,103.084)
P: (44.823,124.411,105.129)
C4': (41.897,126.088,107.028)
C2': (39.814,126.335,105.953)
O2': (39.080,126.645,107.123)
N1: (39.279,127.678,100.691)
N2: (37.170,127.413,101.577)
N3: (38.950,127.495,103.047)
N7: (42.467,127.920,102.472)
N9: (41.094,127.661,104.215)
O5': (43.706,125.444,105.582)
O3': (40.344,124.275,107.132)
OP2: (46.032,124.733,105.917)
C3': (40.860,125.282,106.272)
C1': (40.701,127.537,105.619)
C5': (43.286,125.515,106.953)
O6: (41.299,127.941,99.653)
O4': (41.892,127.379,106.374)
C8: (42.378,127.830,103.767)
C2: (38.484,127.526,101.803)
C6: (40.664,127.823,100.713)
C5: (41.165,127.805,102.026)
C4: (40.294,127.643,103.084)
P: (44.823,124.411,105.129)
C4': (41.897,126.088,107.028)
C2': (39.814,126.335,105.953)
O2': (39.080,126.645,107.123)
N1: (39.279,127.678,100.691)
N2: (37.170,127.413,101.577)
N3: (38.950,127.495,103.047)
N7: (42.467,127.920,102.472)
N9: (41.094,127.661,104.215)
O5': (43.706,125.444,105.582)
O3': (40.344,124.275,107.132)
Image (generated by PyMOL):