Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0347:0345
Extra
PDB:
ATOM 1 O3' G A 346 58.835 122.812 8.624 1.00 65.35 O
ATOM 2 P U A 347 59.692 121.731 7.792 1.00 65.55 P
ATOM 3 OP1 U A 347 61.051 121.607 8.380 1.00 65.48 O
ATOM 4 OP2 U A 347 59.542 122.062 6.354 1.00 66.41 O
ATOM 5 O5' U A 347 58.900 120.365 8.012 1.00 65.07 O
ATOM 6 C5' U A 347 59.060 119.586 9.215 1.00 63.19 C
ATOM 7 C4' U A 347 57.751 118.924 9.583 1.00 62.40 C
ATOM 8 O4' U A 347 56.786 119.939 9.964 1.00 61.51 O
ATOM 9 C3' U A 347 57.065 118.153 8.467 1.00 62.49 C
ATOM 10 O3' U A 347 57.599 116.836 8.363 1.00 65.04 O
ATOM 11 C2' U A 347 55.607 118.152 8.911 1.00 61.24 C
ATOM 12 O2' U A 347 55.322 117.158 9.877 1.00 60.54 O
ATOM 13 C1' U A 347 55.488 119.532 9.567 1.00 60.03 C
ATOM 14 N1 U A 347 54.892 120.591 8.734 1.00 58.74 N
ATOM 15 C2 U A 347 53.546 120.485 8.426 1.00 58.40 C
ATOM 16 O2 U A 347 52.857 119.537 8.769 1.00 59.82 O
ATOM 17 N3 U A 347 53.034 121.528 7.696 1.00 57.62 N
ATOM 18 C4 U A 347 53.709 122.638 7.241 1.00 57.53 C
ATOM 19 O4 U A 347 53.090 123.512 6.630 1.00 56.51 O
ATOM 20 C5 U A 347 55.103 122.666 7.573 1.00 57.08 C
ATOM 21 C6 U A 347 55.634 121.668 8.287 1.00 57.70 C
ATOM 22 P A A 348 57.684 116.113 6.929 1.00 66.45 P
ATOM 23 OP1 A A 348 58.355 114.803 7.164 1.00 65.09 O
ATOM 24 OP2 A A 348 58.259 117.064 5.943 1.00 64.80 O
ATOM 25 O5' A A 348 56.160 115.860 6.532 1.00 64.60 O
TER
ATOM 1 O3' C B 344 53.205 119.913 15.337 1.00 48.26 O
ATOM 2 P A B 345 54.193 119.566 14.113 1.00 51.46 P
ATOM 3 OP1 A B 345 53.370 119.332 12.896 1.00 50.26 O
ATOM 4 OP2 A B 345 55.156 118.523 14.563 1.00 50.29 O
ATOM 5 O5' A B 345 55.007 120.911 13.879 1.00 51.44 O
ATOM 6 C5' A B 345 56.142 120.941 13.003 1.00 52.62 C
ATOM 7 C4' A B 345 56.159 122.230 12.221 1.00 53.82 C
ATOM 8 O4' A B 345 55.109 122.202 11.212 1.00 55.25 O
ATOM 9 C3' A B 345 55.938 123.501 13.036 1.00 54.59 C
ATOM 10 O3' A B 345 56.742 124.537 12.502 1.00 55.75 O
ATOM 11 C2' A B 345 54.461 123.803 12.786 1.00 55.91 C
ATOM 12 O2' A B 345 54.122 125.170 12.923 1.00 54.63 O
ATOM 13 C1' A B 345 54.306 123.357 11.334 1.00 55.63 C
ATOM 14 N9 A B 345 52.928 123.031 10.948 1.00 56.77 N
ATOM 15 C8 A B 345 52.163 121.954 11.328 1.00 57.22 C
ATOM 16 N7 A B 345 50.948 121.967 10.830 1.00 57.72 N
ATOM 17 C5 A B 345 50.910 123.126 10.067 1.00 57.19 C
ATOM 18 C6 A B 345 49.895 123.718 9.286 1.00 57.06 C
ATOM 19 N6 A B 345 48.670 123.206 9.147 1.00 55.77 N
ATOM 20 N1 A B 345 50.185 124.873 8.648 1.00 57.23 N
ATOM 21 C2 A B 345 51.411 125.392 8.791 1.00 57.91 C
ATOM 22 N3 A B 345 52.446 124.936 9.498 1.00 57.99 N
ATOM 23 C4 A B 345 52.126 123.786 10.121 1.00 57.31 C
ATOM 24 P G B 346 58.089 124.976 13.261 1.00 56.43 P
ATOM 25 OP1 G B 346 58.520 123.877 14.159 1.00 57.57 O
ATOM 26 OP2 G B 346 57.863 126.331 13.814 1.00 56.04 O
ATOM 27 O5' G B 346 59.156 125.070 12.084 1.00 58.39 O
TER
ATOM 2 P U A 347 59.692 121.731 7.792 1.00 65.55 P
ATOM 3 OP1 U A 347 61.051 121.607 8.380 1.00 65.48 O
ATOM 4 OP2 U A 347 59.542 122.062 6.354 1.00 66.41 O
ATOM 5 O5' U A 347 58.900 120.365 8.012 1.00 65.07 O
ATOM 6 C5' U A 347 59.060 119.586 9.215 1.00 63.19 C
ATOM 7 C4' U A 347 57.751 118.924 9.583 1.00 62.40 C
ATOM 8 O4' U A 347 56.786 119.939 9.964 1.00 61.51 O
ATOM 9 C3' U A 347 57.065 118.153 8.467 1.00 62.49 C
ATOM 10 O3' U A 347 57.599 116.836 8.363 1.00 65.04 O
ATOM 11 C2' U A 347 55.607 118.152 8.911 1.00 61.24 C
ATOM 12 O2' U A 347 55.322 117.158 9.877 1.00 60.54 O
ATOM 13 C1' U A 347 55.488 119.532 9.567 1.00 60.03 C
ATOM 14 N1 U A 347 54.892 120.591 8.734 1.00 58.74 N
ATOM 15 C2 U A 347 53.546 120.485 8.426 1.00 58.40 C
ATOM 16 O2 U A 347 52.857 119.537 8.769 1.00 59.82 O
ATOM 17 N3 U A 347 53.034 121.528 7.696 1.00 57.62 N
ATOM 18 C4 U A 347 53.709 122.638 7.241 1.00 57.53 C
ATOM 19 O4 U A 347 53.090 123.512 6.630 1.00 56.51 O
ATOM 20 C5 U A 347 55.103 122.666 7.573 1.00 57.08 C
ATOM 21 C6 U A 347 55.634 121.668 8.287 1.00 57.70 C
ATOM 22 P A A 348 57.684 116.113 6.929 1.00 66.45 P
ATOM 23 OP1 A A 348 58.355 114.803 7.164 1.00 65.09 O
ATOM 24 OP2 A A 348 58.259 117.064 5.943 1.00 64.80 O
ATOM 25 O5' A A 348 56.160 115.860 6.532 1.00 64.60 O
TER
ATOM 1 O3' C B 344 53.205 119.913 15.337 1.00 48.26 O
ATOM 2 P A B 345 54.193 119.566 14.113 1.00 51.46 P
ATOM 3 OP1 A B 345 53.370 119.332 12.896 1.00 50.26 O
ATOM 4 OP2 A B 345 55.156 118.523 14.563 1.00 50.29 O
ATOM 5 O5' A B 345 55.007 120.911 13.879 1.00 51.44 O
ATOM 6 C5' A B 345 56.142 120.941 13.003 1.00 52.62 C
ATOM 7 C4' A B 345 56.159 122.230 12.221 1.00 53.82 C
ATOM 8 O4' A B 345 55.109 122.202 11.212 1.00 55.25 O
ATOM 9 C3' A B 345 55.938 123.501 13.036 1.00 54.59 C
ATOM 10 O3' A B 345 56.742 124.537 12.502 1.00 55.75 O
ATOM 11 C2' A B 345 54.461 123.803 12.786 1.00 55.91 C
ATOM 12 O2' A B 345 54.122 125.170 12.923 1.00 54.63 O
ATOM 13 C1' A B 345 54.306 123.357 11.334 1.00 55.63 C
ATOM 14 N9 A B 345 52.928 123.031 10.948 1.00 56.77 N
ATOM 15 C8 A B 345 52.163 121.954 11.328 1.00 57.22 C
ATOM 16 N7 A B 345 50.948 121.967 10.830 1.00 57.72 N
ATOM 17 C5 A B 345 50.910 123.126 10.067 1.00 57.19 C
ATOM 18 C6 A B 345 49.895 123.718 9.286 1.00 57.06 C
ATOM 19 N6 A B 345 48.670 123.206 9.147 1.00 55.77 N
ATOM 20 N1 A B 345 50.185 124.873 8.648 1.00 57.23 N
ATOM 21 C2 A B 345 51.411 125.392 8.791 1.00 57.91 C
ATOM 22 N3 A B 345 52.446 124.936 9.498 1.00 57.99 N
ATOM 23 C4 A B 345 52.126 123.786 10.121 1.00 57.31 C
ATOM 24 P G B 346 58.089 124.976 13.261 1.00 56.43 P
ATOM 25 OP1 G B 346 58.520 123.877 14.159 1.00 57.57 O
ATOM 26 OP2 G B 346 57.863 126.331 13.814 1.00 56.04 O
ATOM 27 O5' G B 346 59.156 125.070 12.084 1.00 58.39 O
TER
Atoms:
C4: (53.709,122.638,7.241)
N3: (53.034,121.528,7.696)
OP1: (61.051,121.607,8.380)
OP2: (59.542,122.062,6.354)
C2: (53.546,120.485,8.426)
C1': (55.488,119.532,9.567)
C3': (57.065,118.153,8.467)
O5': (58.900,120.365,8.012)
O4': (56.786,119.939,9.964)
C5': (59.060,119.586,9.215)
P: (59.692,121.731,7.792)
C4': (57.751,118.924,9.583)
C2': (55.607,118.152,8.911)
O2': (55.322,117.158,9.877)
N1: (54.892,120.591,8.734)
O4: (53.090,123.512,6.630)
O2: (52.857,119.537,8.769)
C6: (55.634,121.668,8.287)
C5: (55.103,122.666,7.573)
O3': (57.599,116.836,8.363)
N3: (53.034,121.528,7.696)
OP1: (61.051,121.607,8.380)
OP2: (59.542,122.062,6.354)
C2: (53.546,120.485,8.426)
C1': (55.488,119.532,9.567)
C3': (57.065,118.153,8.467)
O5': (58.900,120.365,8.012)
O4': (56.786,119.939,9.964)
C5': (59.060,119.586,9.215)
P: (59.692,121.731,7.792)
C4': (57.751,118.924,9.583)
C2': (55.607,118.152,8.911)
O2': (55.322,117.158,9.877)
N1: (54.892,120.591,8.734)
O4: (53.090,123.512,6.630)
O2: (52.857,119.537,8.769)
C6: (55.634,121.668,8.287)
C5: (55.103,122.666,7.573)
O3': (57.599,116.836,8.363)
OP1: (53.370,119.332,12.896)
OP2: (55.156,118.523,14.563)
C3': (55.938,123.501,13.036)
C1': (54.306,123.357,11.334)
C5': (56.142,120.941,13.003)
O4': (55.109,122.202,11.212)
C8: (52.163,121.954,11.328)
O2': (54.122,125.170,12.923)
C6: (49.895,123.718,9.286)
C5: (50.910,123.126,10.067)
C4: (52.126,123.786,10.121)
P: (54.193,119.566,14.113)
C4': (56.159,122.230,12.221)
C2': (54.461,123.803,12.786)
C2: (51.411,125.392,8.791)
N1: (50.185,124.873,8.648)
N3: (52.446,124.936,9.498)
N6: (48.670,123.206,9.147)
N7: (50.948,121.967,10.830)
N9: (52.928,123.031,10.948)
O5': (55.007,120.911,13.879)
O3': (56.742,124.537,12.502)
OP2: (55.156,118.523,14.563)
C3': (55.938,123.501,13.036)
C1': (54.306,123.357,11.334)
C5': (56.142,120.941,13.003)
O4': (55.109,122.202,11.212)
C8: (52.163,121.954,11.328)
O2': (54.122,125.170,12.923)
C6: (49.895,123.718,9.286)
C5: (50.910,123.126,10.067)
C4: (52.126,123.786,10.121)
P: (54.193,119.566,14.113)
C4': (56.159,122.230,12.221)
C2': (54.461,123.803,12.786)
C2: (51.411,125.392,8.791)
N1: (50.185,124.873,8.648)
N3: (52.446,124.936,9.498)
N6: (48.670,123.206,9.147)
N7: (50.948,121.967,10.830)
N9: (52.928,123.031,10.948)
O5': (55.007,120.911,13.879)
O3': (56.742,124.537,12.502)
Image (generated by PyMOL):