ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q86:A2020:A2021

Extra

PDB:
ATOM 1 O3' G A2019 49.903 118.696 105.606 1.00 24.55 O
ATOM 2 P A A2020 48.329 118.640 105.336 1.00 23.50 P
ATOM 3 OP1 A A2020 47.688 118.185 106.593 1.00 20.97 O
ATOM 4 OP2 A A2020 48.101 117.882 104.092 1.00 24.82 O
ATOM 5 O5' A A2020 47.931 120.151 105.058 1.00 23.51 O
ATOM 6 C5' A A2020 47.351 120.962 106.082 1.00 24.89 C
ATOM 7 C4' A A2020 45.991 121.440 105.648 1.00 27.15 C
ATOM 8 O4' A A2020 45.164 120.290 105.330 1.00 26.65 O
ATOM 9 C3' A A2020 45.207 122.243 106.679 1.00 29.71 C
ATOM 10 O3' A A2020 44.396 123.177 105.977 1.00 33.90 O
ATOM 11 C2' A A2020 44.340 121.168 107.318 1.00 29.22 C
ATOM 12 O2' A A2020 43.165 121.631 107.940 1.00 30.78 O
ATOM 13 C1' A A2020 43.983 120.351 106.089 1.00 28.63 C
ATOM 14 N9 A A2020 43.503 118.998 106.336 1.00 30.21 N
ATOM 15 C8 A A2020 43.886 118.066 107.266 1.00 29.96 C
ATOM 16 N7 A A2020 43.224 116.943 107.187 1.00 30.67 N
ATOM 17 C5 A A2020 42.342 117.150 106.133 1.00 33.29 C
ATOM 18 C6 A A2020 41.359 116.338 105.532 1.00 34.68 C
ATOM 19 N6 A A2020 41.076 115.094 105.913 1.00 34.02 N
ATOM 20 N1 A A2020 40.665 116.861 104.501 1.00 35.45 N
ATOM 21 C2 A A2020 40.941 118.110 104.105 1.00 33.92 C
ATOM 22 N3 A A2020 41.828 118.963 104.583 1.00 32.85 N
ATOM 23 C4 A A2020 42.506 118.414 105.607 1.00 32.42 C
ATOM 24 P G A2021 45.006 124.597 105.537 1.00 37.70 P
ATOM 25 OP1 G A2021 45.102 124.595 104.046 1.00 35.66 O
ATOM 26 OP2 G A2021 46.200 124.914 106.346 1.00 37.84 O
ATOM 27 O5' G A2021 43.878 125.620 105.981 1.00 34.95 O
TER

ATOM 1 O3' A B2020 44.396 123.177 105.977 1.00 33.90 O
ATOM 2 P G B2021 45.006 124.597 105.537 1.00 37.70 P
ATOM 3 OP1 G B2021 45.102 124.595 104.046 1.00 35.66 O
ATOM 4 OP2 G B2021 46.200 124.914 106.346 1.00 37.84 O
ATOM 5 O5' G B2021 43.878 125.620 105.981 1.00 34.95 O
ATOM 6 C5' G B2021 43.494 125.728 107.353 1.00 32.55 C
ATOM 7 C4' G B2021 42.086 126.252 107.445 1.00 31.85 C
ATOM 8 O4' G B2021 42.039 127.545 106.800 1.00 31.58 O
ATOM 9 C3' G B2021 41.019 125.427 106.745 1.00 30.38 C
ATOM 10 O3' G B2021 40.506 124.424 107.612 1.00 30.41 O
ATOM 11 C2' G B2021 39.976 126.480 106.420 1.00 29.97 C
ATOM 12 O2' G B2021 39.267 126.842 107.581 1.00 28.42 O
ATOM 13 C1' G B2021 40.865 127.656 106.023 1.00 29.88 C
ATOM 14 N9 G B2021 41.287 127.694 104.626 1.00 31.05 N
ATOM 15 C8 G B2021 42.588 127.710 104.181 1.00 32.50 C
ATOM 16 N7 G B2021 42.690 127.782 102.885 1.00 33.94 N
ATOM 17 C5 G B2021 41.378 127.809 102.439 1.00 33.15 C
ATOM 18 C6 G B2021 40.872 127.882 101.129 1.00 34.39 C
ATOM 19 O6 G B2021 41.505 127.964 100.062 1.00 35.93 O
ATOM 20 N1 G B2021 39.479 127.852 101.121 1.00 34.63 N
ATOM 21 C2 G B2021 38.682 127.770 102.238 1.00 32.12 C
ATOM 22 N2 G B2021 37.366 127.720 102.023 1.00 32.32 N
ATOM 23 N3 G B2021 39.146 127.730 103.471 1.00 31.29 N
ATOM 24 C4 G B2021 40.496 127.746 103.500 1.00 31.97 C
ATOM 25 P U B2022 40.247 122.944 107.057 1.00 33.87 P
ATOM 26 OP1 U B2022 39.733 122.157 108.203 1.00 32.80 O
ATOM 27 OP2 U B2022 41.457 122.488 106.340 1.00 31.64 O
ATOM 28 O5' U B2022 39.079 123.108 105.984 1.00 33.10 O
TER

Atoms:
OP1: (47.688,118.185,106.593)
OP2: (48.101,117.882,104.092)
C3': (45.207,122.243,106.679)
C1': (43.983,120.351,106.089)
C5': (47.351,120.962,106.082)
O4': (45.164,120.290,105.330)
C8: (43.886,118.066,107.266)
O2': (43.165,121.631,107.940)
C6: (41.359,116.338,105.532)
C5: (42.342,117.150,106.133)
C4: (42.506,118.414,105.607)
P: (48.329,118.640,105.336)
C4': (45.991,121.440,105.648)
C2': (44.340,121.168,107.318)
C2: (40.941,118.110,104.105)
N1: (40.665,116.861,104.501)
N3: (41.828,118.963,104.583)
N6: (41.076,115.094,105.913)
N7: (43.224,116.943,107.187)
N9: (43.503,118.998,106.336)
O5': (47.931,120.151,105.058)
O3': (44.396,123.177,105.977)
OP1: (45.102,124.595,104.046)
OP2: (46.200,124.914,106.346)
C3': (41.019,125.427,106.745)
C1': (40.865,127.656,106.023)
C5': (43.494,125.728,107.353)
O6: (41.505,127.964,100.062)
O4': (42.039,127.545,106.800)
C8: (42.588,127.710,104.181)
C2: (38.682,127.770,102.238)
C6: (40.872,127.882,101.129)
C5: (41.378,127.809,102.439)
C4: (40.496,127.746,103.500)
P: (45.006,124.597,105.537)
C4': (42.086,126.252,107.445)
C2': (39.976,126.480,106.420)
O2': (39.267,126.842,107.581)
N1: (39.479,127.852,101.121)
N2: (37.366,127.720,102.023)
N3: (39.146,127.730,103.471)
N7: (42.690,127.782,102.885)
N9: (41.287,127.694,104.626)
O5': (43.878,125.620,105.981)
O3': (40.506,124.424,107.612)
Image (generated by PyMOL):
PyMOL image
show in jmol