ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ4:02020:02021

Extra

PDB:
ATOM 1 O3' G A2019 50.158 119.181 105.745 1.00 35.96 O
ATOM 2 P A A2020 48.590 119.146 105.423 1.00 37.76 P
ATOM 3 OP1 A A2020 47.894 118.612 106.627 1.00 33.10 O
ATOM 4 OP2 A A2020 48.405 118.474 104.114 1.00 39.23 O
ATOM 5 O5' A A2020 48.212 120.680 105.214 1.00 36.81 O
ATOM 6 C5' A A2020 47.550 121.434 106.242 1.00 34.82 C
ATOM 7 C4' A A2020 46.198 121.886 105.754 1.00 36.17 C
ATOM 8 O4' A A2020 45.395 120.716 105.417 1.00 36.36 O
ATOM 9 C3' A A2020 45.372 122.682 106.757 1.00 37.41 C
ATOM 10 O3' A A2020 44.547 123.604 106.060 1.00 40.60 O
ATOM 11 C2' A A2020 44.467 121.610 107.345 1.00 37.39 C
ATOM 12 O2' A A2020 43.268 122.123 107.873 1.00 41.31 O
ATOM 13 C1' A A2020 44.168 120.789 106.100 1.00 36.63 C
ATOM 14 N9 A A2020 43.667 119.439 106.327 1.00 36.77 N
ATOM 15 C8 A A2020 44.063 118.499 107.244 1.00 36.80 C
ATOM 16 N7 A A2020 43.408 117.370 107.157 1.00 37.60 N
ATOM 17 C5 A A2020 42.512 117.586 106.117 1.00 38.23 C
ATOM 18 C6 A A2020 41.536 116.770 105.513 1.00 38.26 C
ATOM 19 N6 A A2020 41.259 115.521 105.902 1.00 37.68 N
ATOM 20 N1 A A2020 40.841 117.288 104.481 1.00 37.90 N
ATOM 21 C2 A A2020 41.097 118.535 104.099 1.00 36.61 C
ATOM 22 N3 A A2020 41.974 119.402 104.589 1.00 38.54 N
ATOM 23 C4 A A2020 42.661 118.857 105.604 1.00 37.67 C
ATOM 24 P G A2021 45.151 125.000 105.544 1.00 45.86 P
ATOM 25 OP1 G A2021 45.163 124.938 104.050 1.00 44.28 O
ATOM 26 OP2 G A2021 46.400 125.317 106.283 1.00 44.38 O
ATOM 27 O5' G A2021 44.052 126.062 105.976 1.00 42.58 O
TER

ATOM 1 O3' A B2020 44.547 123.604 106.060 1.00 40.60 O
ATOM 2 P G B2021 45.151 125.000 105.544 1.00 45.86 P
ATOM 3 OP1 G B2021 45.163 124.938 104.050 1.00 44.28 O
ATOM 4 OP2 G B2021 46.400 125.317 106.283 1.00 44.38 O
ATOM 5 O5' G B2021 44.052 126.062 105.976 1.00 42.58 O
ATOM 6 C5' G B2021 43.619 126.161 107.341 1.00 39.34 C
ATOM 7 C4' G B2021 42.242 126.765 107.390 1.00 37.92 C
ATOM 8 O4' G B2021 42.278 128.034 106.680 1.00 38.44 O
ATOM 9 C3' G B2021 41.170 125.970 106.666 1.00 35.63 C
ATOM 10 O3' G B2021 40.634 124.950 107.495 1.00 35.67 O
ATOM 11 C2' G B2021 40.162 127.053 106.319 1.00 34.58 C
ATOM 12 O2' G B2021 39.425 127.478 107.442 1.00 32.69 O
ATOM 13 C1' G B2021 41.093 128.198 105.927 1.00 36.05 C
ATOM 14 N9 G B2021 41.463 128.244 104.511 1.00 37.17 N
ATOM 15 C8 G B2021 42.729 128.372 103.998 1.00 34.58 C
ATOM 16 N7 G B2021 42.750 128.459 102.696 1.00 34.16 N
ATOM 17 C5 G B2021 41.419 128.368 102.322 1.00 35.37 C
ATOM 18 C6 G B2021 40.823 128.416 101.035 1.00 36.52 C
ATOM 19 O6 G B2021 41.375 128.574 99.930 1.00 35.83 O
ATOM 20 N1 G B2021 39.443 128.263 101.110 1.00 36.43 N
ATOM 21 C2 G B2021 38.729 128.089 102.272 1.00 36.86 C
ATOM 22 N2 G B2021 37.408 127.911 102.136 1.00 37.54 N
ATOM 23 N3 G B2021 39.270 128.074 103.475 1.00 35.10 N
ATOM 24 C4 G B2021 40.610 128.213 103.427 1.00 36.25 C
ATOM 25 P U B2022 40.479 123.459 106.922 1.00 36.72 P
ATOM 26 OP1 U B2022 40.153 122.601 108.064 1.00 38.35 O
ATOM 27 OP2 U B2022 41.648 123.142 106.079 1.00 38.36 O
ATOM 28 O5' U B2022 39.222 123.512 105.951 1.00 38.73 O
TER

Atoms:
OP1: (47.894,118.612,106.627)
OP2: (48.405,118.474,104.114)
C3': (45.372,122.682,106.757)
C1': (44.168,120.789,106.100)
C5': (47.550,121.434,106.242)
O4': (45.395,120.716,105.417)
C8: (44.063,118.499,107.244)
O2': (43.268,122.123,107.873)
C6: (41.536,116.770,105.513)
C5: (42.512,117.586,106.117)
C4: (42.661,118.857,105.604)
P: (48.590,119.146,105.423)
C4': (46.198,121.886,105.754)
C2': (44.467,121.610,107.345)
C2: (41.097,118.535,104.099)
N1: (40.841,117.288,104.481)
N3: (41.974,119.402,104.589)
N6: (41.259,115.521,105.902)
N7: (43.408,117.370,107.157)
N9: (43.667,119.439,106.327)
O5': (48.212,120.680,105.214)
O3': (44.547,123.604,106.060)
OP1: (45.163,124.938,104.050)
OP2: (46.400,125.317,106.283)
C3': (41.170,125.970,106.666)
C1': (41.093,128.198,105.927)
C5': (43.619,126.161,107.341)
O6: (41.375,128.574,99.930)
O4': (42.278,128.034,106.680)
C8: (42.729,128.372,103.998)
C2: (38.729,128.089,102.272)
C6: (40.823,128.416,101.035)
C5: (41.419,128.368,102.322)
C4: (40.610,128.213,103.427)
P: (45.151,125.000,105.544)
C4': (42.242,126.765,107.390)
C2': (40.162,127.053,106.319)
O2': (39.425,127.478,107.442)
N1: (39.443,128.263,101.110)
N2: (37.408,127.911,102.136)
N3: (39.270,128.074,103.475)
N7: (42.750,128.459,102.696)
N9: (41.463,128.244,104.511)
O5': (44.052,126.062,105.976)
O3': (40.634,124.950,107.495)
Image (generated by PyMOL):
PyMOL image
show in jmol