Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:02020:02021
Extra
PDB:
ATOM 1 O3' G A2019 49.563 118.563 105.708 1.00 37.96 O
ATOM 2 P A A2020 48.014 118.546 105.335 1.00 36.78 P
ATOM 3 OP1 A A2020 47.304 117.992 106.508 1.00 35.62 O
ATOM 4 OP2 A A2020 47.856 117.898 104.014 1.00 38.44 O
ATOM 5 O5' A A2020 47.667 120.084 105.147 1.00 37.93 O
ATOM 6 C5' A A2020 47.008 120.826 106.173 1.00 39.52 C
ATOM 7 C4' A A2020 45.667 121.298 105.679 1.00 41.48 C
ATOM 8 O4' A A2020 44.854 120.147 105.311 1.00 39.11 O
ATOM 9 C3' A A2020 44.854 122.079 106.703 1.00 42.36 C
ATOM 10 O3' A A2020 44.031 123.026 106.025 1.00 47.83 O
ATOM 11 C2' A A2020 43.957 120.996 107.285 1.00 40.96 C
ATOM 12 O2' A A2020 42.772 121.517 107.832 1.00 43.04 O
ATOM 13 C1' A A2020 43.644 120.194 106.031 1.00 40.72 C
ATOM 14 N9 A A2020 43.142 118.836 106.235 1.00 40.65 N
ATOM 15 C8 A A2020 43.535 117.876 107.132 1.00 40.46 C
ATOM 16 N7 A A2020 42.856 116.759 107.037 1.00 40.49 N
ATOM 17 C5 A A2020 41.953 117.002 106.010 1.00 40.70 C
ATOM 18 C6 A A2020 40.940 116.216 105.417 1.00 40.47 C
ATOM 19 N6 A A2020 40.630 114.974 105.799 1.00 39.83 N
ATOM 20 N1 A A2020 40.240 116.762 104.405 1.00 39.61 N
ATOM 21 C2 A A2020 40.522 118.005 104.028 1.00 39.08 C
ATOM 22 N3 A A2020 41.428 118.843 104.507 1.00 40.50 N
ATOM 23 C4 A A2020 42.122 118.274 105.508 1.00 40.76 C
ATOM 24 P G A2021 44.633 124.450 105.572 1.00 50.57 P
ATOM 25 OP1 G A2021 44.762 124.384 104.085 1.00 49.95 O
ATOM 26 OP2 G A2021 45.817 124.790 106.393 1.00 49.27 O
ATOM 27 O5' G A2021 43.466 125.470 105.940 1.00 47.74 O
TER
ATOM 1 O3' A B2020 44.031 123.026 106.025 1.00 47.83 O
ATOM 2 P G B2021 44.633 124.450 105.572 1.00 50.57 P
ATOM 3 OP1 G B2021 44.762 124.384 104.085 1.00 49.95 O
ATOM 4 OP2 G B2021 45.817 124.790 106.393 1.00 49.27 O
ATOM 5 O5' G B2021 43.466 125.470 105.940 1.00 47.74 O
ATOM 6 C5' G B2021 43.014 125.607 107.304 1.00 44.28 C
ATOM 7 C4' G B2021 41.624 126.203 107.341 1.00 41.10 C
ATOM 8 O4' G B2021 41.649 127.474 106.646 1.00 40.23 O
ATOM 9 C3' G B2021 40.539 125.407 106.637 1.00 39.43 C
ATOM 10 O3' G B2021 39.987 124.410 107.490 1.00 39.45 O
ATOM 11 C2' G B2021 39.533 126.489 106.274 1.00 39.11 C
ATOM 12 O2' G B2021 38.760 126.913 107.373 1.00 36.18 O
ATOM 13 C1' G B2021 40.464 127.638 105.894 1.00 39.29 C
ATOM 14 N9 G B2021 40.840 127.702 104.483 1.00 40.62 N
ATOM 15 C8 G B2021 42.115 127.838 103.990 1.00 41.41 C
ATOM 16 N7 G B2021 42.158 127.933 102.692 1.00 41.67 N
ATOM 17 C5 G B2021 40.834 127.835 102.297 1.00 41.13 C
ATOM 18 C6 G B2021 40.269 127.877 101.007 1.00 41.07 C
ATOM 19 O6 G B2021 40.841 128.044 99.926 1.00 42.51 O
ATOM 20 N1 G B2021 38.891 127.714 101.048 1.00 41.16 N
ATOM 21 C2 G B2021 38.150 127.553 102.190 1.00 40.49 C
ATOM 22 N2 G B2021 36.834 127.405 102.016 1.00 39.92 N
ATOM 23 N3 G B2021 38.666 127.535 103.409 1.00 39.10 N
ATOM 24 C4 G B2021 40.006 127.674 103.387 1.00 40.28 C
ATOM 25 P U B2022 39.795 122.912 106.943 1.00 39.84 P
ATOM 26 OP1 U B2022 39.415 122.076 108.086 1.00 41.97 O
ATOM 27 OP2 U B2022 40.995 122.555 106.155 1.00 43.33 O
ATOM 28 O5' U B2022 38.574 123.000 105.926 1.00 40.48 O
TER
ATOM 2 P A A2020 48.014 118.546 105.335 1.00 36.78 P
ATOM 3 OP1 A A2020 47.304 117.992 106.508 1.00 35.62 O
ATOM 4 OP2 A A2020 47.856 117.898 104.014 1.00 38.44 O
ATOM 5 O5' A A2020 47.667 120.084 105.147 1.00 37.93 O
ATOM 6 C5' A A2020 47.008 120.826 106.173 1.00 39.52 C
ATOM 7 C4' A A2020 45.667 121.298 105.679 1.00 41.48 C
ATOM 8 O4' A A2020 44.854 120.147 105.311 1.00 39.11 O
ATOM 9 C3' A A2020 44.854 122.079 106.703 1.00 42.36 C
ATOM 10 O3' A A2020 44.031 123.026 106.025 1.00 47.83 O
ATOM 11 C2' A A2020 43.957 120.996 107.285 1.00 40.96 C
ATOM 12 O2' A A2020 42.772 121.517 107.832 1.00 43.04 O
ATOM 13 C1' A A2020 43.644 120.194 106.031 1.00 40.72 C
ATOM 14 N9 A A2020 43.142 118.836 106.235 1.00 40.65 N
ATOM 15 C8 A A2020 43.535 117.876 107.132 1.00 40.46 C
ATOM 16 N7 A A2020 42.856 116.759 107.037 1.00 40.49 N
ATOM 17 C5 A A2020 41.953 117.002 106.010 1.00 40.70 C
ATOM 18 C6 A A2020 40.940 116.216 105.417 1.00 40.47 C
ATOM 19 N6 A A2020 40.630 114.974 105.799 1.00 39.83 N
ATOM 20 N1 A A2020 40.240 116.762 104.405 1.00 39.61 N
ATOM 21 C2 A A2020 40.522 118.005 104.028 1.00 39.08 C
ATOM 22 N3 A A2020 41.428 118.843 104.507 1.00 40.50 N
ATOM 23 C4 A A2020 42.122 118.274 105.508 1.00 40.76 C
ATOM 24 P G A2021 44.633 124.450 105.572 1.00 50.57 P
ATOM 25 OP1 G A2021 44.762 124.384 104.085 1.00 49.95 O
ATOM 26 OP2 G A2021 45.817 124.790 106.393 1.00 49.27 O
ATOM 27 O5' G A2021 43.466 125.470 105.940 1.00 47.74 O
TER
ATOM 1 O3' A B2020 44.031 123.026 106.025 1.00 47.83 O
ATOM 2 P G B2021 44.633 124.450 105.572 1.00 50.57 P
ATOM 3 OP1 G B2021 44.762 124.384 104.085 1.00 49.95 O
ATOM 4 OP2 G B2021 45.817 124.790 106.393 1.00 49.27 O
ATOM 5 O5' G B2021 43.466 125.470 105.940 1.00 47.74 O
ATOM 6 C5' G B2021 43.014 125.607 107.304 1.00 44.28 C
ATOM 7 C4' G B2021 41.624 126.203 107.341 1.00 41.10 C
ATOM 8 O4' G B2021 41.649 127.474 106.646 1.00 40.23 O
ATOM 9 C3' G B2021 40.539 125.407 106.637 1.00 39.43 C
ATOM 10 O3' G B2021 39.987 124.410 107.490 1.00 39.45 O
ATOM 11 C2' G B2021 39.533 126.489 106.274 1.00 39.11 C
ATOM 12 O2' G B2021 38.760 126.913 107.373 1.00 36.18 O
ATOM 13 C1' G B2021 40.464 127.638 105.894 1.00 39.29 C
ATOM 14 N9 G B2021 40.840 127.702 104.483 1.00 40.62 N
ATOM 15 C8 G B2021 42.115 127.838 103.990 1.00 41.41 C
ATOM 16 N7 G B2021 42.158 127.933 102.692 1.00 41.67 N
ATOM 17 C5 G B2021 40.834 127.835 102.297 1.00 41.13 C
ATOM 18 C6 G B2021 40.269 127.877 101.007 1.00 41.07 C
ATOM 19 O6 G B2021 40.841 128.044 99.926 1.00 42.51 O
ATOM 20 N1 G B2021 38.891 127.714 101.048 1.00 41.16 N
ATOM 21 C2 G B2021 38.150 127.553 102.190 1.00 40.49 C
ATOM 22 N2 G B2021 36.834 127.405 102.016 1.00 39.92 N
ATOM 23 N3 G B2021 38.666 127.535 103.409 1.00 39.10 N
ATOM 24 C4 G B2021 40.006 127.674 103.387 1.00 40.28 C
ATOM 25 P U B2022 39.795 122.912 106.943 1.00 39.84 P
ATOM 26 OP1 U B2022 39.415 122.076 108.086 1.00 41.97 O
ATOM 27 OP2 U B2022 40.995 122.555 106.155 1.00 43.33 O
ATOM 28 O5' U B2022 38.574 123.000 105.926 1.00 40.48 O
TER
Atoms:
OP1: (47.304,117.992,106.508)
OP2: (47.856,117.898,104.014)
C3': (44.854,122.079,106.703)
C1': (43.644,120.194,106.031)
C5': (47.008,120.826,106.173)
O4': (44.854,120.147,105.311)
C8: (43.535,117.876,107.132)
O2': (42.772,121.517,107.832)
C6: (40.940,116.216,105.417)
C5: (41.953,117.002,106.010)
C4: (42.122,118.274,105.508)
P: (48.014,118.546,105.335)
C4': (45.667,121.298,105.679)
C2': (43.957,120.996,107.285)
C2: (40.522,118.005,104.028)
N1: (40.240,116.762,104.405)
N3: (41.428,118.843,104.507)
N6: (40.630,114.974,105.799)
N7: (42.856,116.759,107.037)
N9: (43.142,118.836,106.235)
O5': (47.667,120.084,105.147)
O3': (44.031,123.026,106.025)
OP2: (47.856,117.898,104.014)
C3': (44.854,122.079,106.703)
C1': (43.644,120.194,106.031)
C5': (47.008,120.826,106.173)
O4': (44.854,120.147,105.311)
C8: (43.535,117.876,107.132)
O2': (42.772,121.517,107.832)
C6: (40.940,116.216,105.417)
C5: (41.953,117.002,106.010)
C4: (42.122,118.274,105.508)
P: (48.014,118.546,105.335)
C4': (45.667,121.298,105.679)
C2': (43.957,120.996,107.285)
C2: (40.522,118.005,104.028)
N1: (40.240,116.762,104.405)
N3: (41.428,118.843,104.507)
N6: (40.630,114.974,105.799)
N7: (42.856,116.759,107.037)
N9: (43.142,118.836,106.235)
O5': (47.667,120.084,105.147)
O3': (44.031,123.026,106.025)
OP1: (44.762,124.384,104.085)
OP2: (45.817,124.790,106.393)
C3': (40.539,125.407,106.637)
C1': (40.464,127.638,105.894)
C5': (43.014,125.607,107.304)
O6: (40.841,128.044,99.926)
O4': (41.649,127.474,106.646)
C8: (42.115,127.838,103.990)
C2: (38.150,127.553,102.190)
C6: (40.269,127.877,101.007)
C5: (40.834,127.835,102.297)
C4: (40.006,127.674,103.387)
P: (44.633,124.450,105.572)
C4': (41.624,126.203,107.341)
C2': (39.533,126.489,106.274)
O2': (38.760,126.913,107.373)
N1: (38.891,127.714,101.048)
N2: (36.834,127.405,102.016)
N3: (38.666,127.535,103.409)
N7: (42.158,127.933,102.692)
N9: (40.840,127.702,104.483)
O5': (43.466,125.470,105.940)
O3': (39.987,124.410,107.490)
OP2: (45.817,124.790,106.393)
C3': (40.539,125.407,106.637)
C1': (40.464,127.638,105.894)
C5': (43.014,125.607,107.304)
O6: (40.841,128.044,99.926)
O4': (41.649,127.474,106.646)
C8: (42.115,127.838,103.990)
C2: (38.150,127.553,102.190)
C6: (40.269,127.877,101.007)
C5: (40.834,127.835,102.297)
C4: (40.006,127.674,103.387)
P: (44.633,124.450,105.572)
C4': (41.624,126.203,107.341)
C2': (39.533,126.489,106.274)
O2': (38.760,126.913,107.373)
N1: (38.891,127.714,101.048)
N2: (36.834,127.405,102.016)
N3: (38.666,127.535,103.409)
N7: (42.158,127.933,102.692)
N9: (40.840,127.702,104.483)
O5': (43.466,125.470,105.940)
O3': (39.987,124.410,107.490)
Image (generated by PyMOL):