Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0453:0451
Extra
PDB:
ATOM 1 O3' G A 452 56.697 143.803 51.867 1.00 49.50 O
ATOM 2 P U A 453 57.740 144.903 52.392 1.00 52.77 P
ATOM 3 OP1 U A 453 58.551 145.378 51.237 1.00 51.13 O
ATOM 4 OP2 U A 453 58.429 144.374 53.610 1.00 50.51 O
ATOM 5 O5' U A 453 56.787 146.090 52.855 1.00 48.07 O
ATOM 6 C5' U A 453 56.129 146.923 51.895 1.00 45.59 C
ATOM 7 C4' U A 453 54.907 147.545 52.514 1.00 46.18 C
ATOM 8 O4' U A 453 53.866 146.548 52.625 1.00 45.69 O
ATOM 9 C3' U A 453 55.111 148.047 53.933 1.00 46.17 C
ATOM 10 O3' U A 453 55.711 149.340 53.973 1.00 46.68 O
ATOM 11 C2' U A 453 53.704 147.982 54.511 1.00 44.62 C
ATOM 12 O2' U A 453 52.898 149.071 54.115 1.00 42.62 O
ATOM 13 C1' U A 453 53.181 146.696 53.862 1.00 43.81 C
ATOM 14 N1 U A 453 53.414 145.471 54.646 1.00 41.07 N
ATOM 15 C2 U A 453 52.725 145.298 55.836 1.00 40.68 C
ATOM 16 O2 U A 453 51.956 146.124 56.284 1.00 42.47 O
ATOM 17 N3 U A 453 52.986 144.121 56.489 1.00 39.15 N
ATOM 18 C4 U A 453 53.857 143.128 56.093 1.00 40.57 C
ATOM 19 O4 U A 453 54.003 142.128 56.795 1.00 41.00 O
ATOM 20 C5 U A 453 54.536 143.386 54.865 1.00 41.52 C
ATOM 21 C6 U A 453 54.297 144.516 54.202 1.00 40.99 C
ATOM 22 P A A 454 56.834 149.651 55.075 1.00 45.82 P
ATOM 23 OP1 A A 454 57.267 151.053 54.913 1.00 46.54 O
ATOM 24 OP2 A A 454 57.844 148.565 55.043 1.00 46.24 O
ATOM 25 O5' A A 454 56.029 149.553 56.441 1.00 45.17 O
TER
ATOM 1 O3' A B 450 49.185 147.801 50.104 1.00 69.77 O
ATOM 2 P A B 451 48.866 146.237 49.906 1.00 69.94 P
ATOM 3 OP1 A B 451 49.234 145.895 48.504 1.00 70.01 O
ATOM 4 OP2 A B 451 47.485 145.958 50.395 1.00 70.19 O
ATOM 5 O5' A B 451 49.914 145.528 50.872 1.00 65.63 O
ATOM 6 C5' A B 451 51.319 145.804 50.743 1.00 58.44 C
ATOM 7 C4' A B 451 52.108 144.531 50.880 1.00 54.50 C
ATOM 8 O4' A B 451 52.104 144.084 52.266 1.00 53.13 O
ATOM 9 C3' A B 451 51.592 143.356 50.064 1.00 51.69 C
ATOM 10 O3' A B 451 52.706 142.538 49.797 1.00 51.65 O
ATOM 11 C2' A B 451 50.745 142.612 51.086 1.00 51.31 C
ATOM 12 O2' A B 451 50.556 141.260 50.720 1.00 52.29 O
ATOM 13 C1' A B 451 51.633 142.757 52.325 1.00 50.21 C
ATOM 14 N9 A B 451 51.001 142.539 53.627 1.00 46.82 N
ATOM 15 C8 A B 451 50.096 143.335 54.284 1.00 47.36 C
ATOM 16 N7 A B 451 49.676 142.832 55.418 1.00 45.81 N
ATOM 17 C5 A B 451 50.356 141.628 55.518 1.00 44.07 C
ATOM 18 C6 A B 451 50.337 140.613 56.482 1.00 43.65 C
ATOM 19 N6 A B 451 49.560 140.632 57.569 1.00 41.57 N
ATOM 20 N1 A B 451 51.151 139.555 56.289 1.00 43.69 N
ATOM 21 C2 A B 451 51.921 139.527 55.198 1.00 42.50 C
ATOM 22 N3 A B 451 52.017 140.412 54.217 1.00 43.41 N
ATOM 23 C4 A B 451 51.195 141.449 54.436 1.00 43.97 C
ATOM 24 P G B 452 53.113 142.198 48.295 1.00 53.41 P
ATOM 25 OP1 G B 452 53.460 143.495 47.657 1.00 52.44 O
ATOM 26 OP2 G B 452 52.048 141.347 47.703 1.00 53.34 O
ATOM 27 O5' G B 452 54.434 141.327 48.490 1.00 50.01 O
TER
ATOM 2 P U A 453 57.740 144.903 52.392 1.00 52.77 P
ATOM 3 OP1 U A 453 58.551 145.378 51.237 1.00 51.13 O
ATOM 4 OP2 U A 453 58.429 144.374 53.610 1.00 50.51 O
ATOM 5 O5' U A 453 56.787 146.090 52.855 1.00 48.07 O
ATOM 6 C5' U A 453 56.129 146.923 51.895 1.00 45.59 C
ATOM 7 C4' U A 453 54.907 147.545 52.514 1.00 46.18 C
ATOM 8 O4' U A 453 53.866 146.548 52.625 1.00 45.69 O
ATOM 9 C3' U A 453 55.111 148.047 53.933 1.00 46.17 C
ATOM 10 O3' U A 453 55.711 149.340 53.973 1.00 46.68 O
ATOM 11 C2' U A 453 53.704 147.982 54.511 1.00 44.62 C
ATOM 12 O2' U A 453 52.898 149.071 54.115 1.00 42.62 O
ATOM 13 C1' U A 453 53.181 146.696 53.862 1.00 43.81 C
ATOM 14 N1 U A 453 53.414 145.471 54.646 1.00 41.07 N
ATOM 15 C2 U A 453 52.725 145.298 55.836 1.00 40.68 C
ATOM 16 O2 U A 453 51.956 146.124 56.284 1.00 42.47 O
ATOM 17 N3 U A 453 52.986 144.121 56.489 1.00 39.15 N
ATOM 18 C4 U A 453 53.857 143.128 56.093 1.00 40.57 C
ATOM 19 O4 U A 453 54.003 142.128 56.795 1.00 41.00 O
ATOM 20 C5 U A 453 54.536 143.386 54.865 1.00 41.52 C
ATOM 21 C6 U A 453 54.297 144.516 54.202 1.00 40.99 C
ATOM 22 P A A 454 56.834 149.651 55.075 1.00 45.82 P
ATOM 23 OP1 A A 454 57.267 151.053 54.913 1.00 46.54 O
ATOM 24 OP2 A A 454 57.844 148.565 55.043 1.00 46.24 O
ATOM 25 O5' A A 454 56.029 149.553 56.441 1.00 45.17 O
TER
ATOM 1 O3' A B 450 49.185 147.801 50.104 1.00 69.77 O
ATOM 2 P A B 451 48.866 146.237 49.906 1.00 69.94 P
ATOM 3 OP1 A B 451 49.234 145.895 48.504 1.00 70.01 O
ATOM 4 OP2 A B 451 47.485 145.958 50.395 1.00 70.19 O
ATOM 5 O5' A B 451 49.914 145.528 50.872 1.00 65.63 O
ATOM 6 C5' A B 451 51.319 145.804 50.743 1.00 58.44 C
ATOM 7 C4' A B 451 52.108 144.531 50.880 1.00 54.50 C
ATOM 8 O4' A B 451 52.104 144.084 52.266 1.00 53.13 O
ATOM 9 C3' A B 451 51.592 143.356 50.064 1.00 51.69 C
ATOM 10 O3' A B 451 52.706 142.538 49.797 1.00 51.65 O
ATOM 11 C2' A B 451 50.745 142.612 51.086 1.00 51.31 C
ATOM 12 O2' A B 451 50.556 141.260 50.720 1.00 52.29 O
ATOM 13 C1' A B 451 51.633 142.757 52.325 1.00 50.21 C
ATOM 14 N9 A B 451 51.001 142.539 53.627 1.00 46.82 N
ATOM 15 C8 A B 451 50.096 143.335 54.284 1.00 47.36 C
ATOM 16 N7 A B 451 49.676 142.832 55.418 1.00 45.81 N
ATOM 17 C5 A B 451 50.356 141.628 55.518 1.00 44.07 C
ATOM 18 C6 A B 451 50.337 140.613 56.482 1.00 43.65 C
ATOM 19 N6 A B 451 49.560 140.632 57.569 1.00 41.57 N
ATOM 20 N1 A B 451 51.151 139.555 56.289 1.00 43.69 N
ATOM 21 C2 A B 451 51.921 139.527 55.198 1.00 42.50 C
ATOM 22 N3 A B 451 52.017 140.412 54.217 1.00 43.41 N
ATOM 23 C4 A B 451 51.195 141.449 54.436 1.00 43.97 C
ATOM 24 P G B 452 53.113 142.198 48.295 1.00 53.41 P
ATOM 25 OP1 G B 452 53.460 143.495 47.657 1.00 52.44 O
ATOM 26 OP2 G B 452 52.048 141.347 47.703 1.00 53.34 O
ATOM 27 O5' G B 452 54.434 141.327 48.490 1.00 50.01 O
TER
Atoms:
C4: (53.857,143.128,56.093)
N3: (52.986,144.121,56.489)
OP1: (58.551,145.378,51.237)
OP2: (58.429,144.374,53.610)
C2: (52.725,145.298,55.836)
C1': (53.181,146.696,53.862)
C3': (55.111,148.047,53.933)
O5': (56.787,146.090,52.855)
O4': (53.866,146.548,52.625)
C5': (56.129,146.923,51.895)
P: (57.740,144.903,52.392)
C4': (54.907,147.545,52.514)
C2': (53.704,147.982,54.511)
O2': (52.898,149.071,54.115)
N1: (53.414,145.471,54.646)
O4: (54.003,142.128,56.795)
O2: (51.956,146.124,56.284)
C6: (54.297,144.516,54.202)
C5: (54.536,143.386,54.865)
O3': (55.711,149.340,53.973)
N3: (52.986,144.121,56.489)
OP1: (58.551,145.378,51.237)
OP2: (58.429,144.374,53.610)
C2: (52.725,145.298,55.836)
C1': (53.181,146.696,53.862)
C3': (55.111,148.047,53.933)
O5': (56.787,146.090,52.855)
O4': (53.866,146.548,52.625)
C5': (56.129,146.923,51.895)
P: (57.740,144.903,52.392)
C4': (54.907,147.545,52.514)
C2': (53.704,147.982,54.511)
O2': (52.898,149.071,54.115)
N1: (53.414,145.471,54.646)
O4: (54.003,142.128,56.795)
O2: (51.956,146.124,56.284)
C6: (54.297,144.516,54.202)
C5: (54.536,143.386,54.865)
O3': (55.711,149.340,53.973)
OP1: (49.234,145.895,48.504)
OP2: (47.485,145.958,50.395)
C3': (51.592,143.356,50.064)
C1': (51.633,142.757,52.325)
C5': (51.319,145.804,50.743)
O4': (52.104,144.084,52.266)
C8: (50.096,143.335,54.284)
O2': (50.556,141.260,50.720)
C6: (50.337,140.613,56.482)
C5: (50.356,141.628,55.518)
C4: (51.195,141.449,54.436)
P: (48.866,146.237,49.906)
C4': (52.108,144.531,50.880)
C2': (50.745,142.612,51.086)
C2: (51.921,139.527,55.198)
N1: (51.151,139.555,56.289)
N3: (52.017,140.412,54.217)
N6: (49.560,140.632,57.569)
N7: (49.676,142.832,55.418)
N9: (51.001,142.539,53.627)
O5': (49.914,145.528,50.872)
O3': (52.706,142.538,49.797)
OP2: (47.485,145.958,50.395)
C3': (51.592,143.356,50.064)
C1': (51.633,142.757,52.325)
C5': (51.319,145.804,50.743)
O4': (52.104,144.084,52.266)
C8: (50.096,143.335,54.284)
O2': (50.556,141.260,50.720)
C6: (50.337,140.613,56.482)
C5: (50.356,141.628,55.518)
C4: (51.195,141.449,54.436)
P: (48.866,146.237,49.906)
C4': (52.108,144.531,50.880)
C2': (50.745,142.612,51.086)
C2: (51.921,139.527,55.198)
N1: (51.151,139.555,56.289)
N3: (52.017,140.412,54.217)
N6: (49.560,140.632,57.569)
N7: (49.676,142.832,55.418)
N9: (51.001,142.539,53.627)
O5': (49.914,145.528,50.872)
O3': (52.706,142.538,49.797)
Image (generated by PyMOL):