Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:02020:02021
Extra
PDB:
ATOM 1 O3' G A2019 49.881 117.802 105.514 1.00 34.43 O
ATOM 2 P A A2020 48.337 117.752 105.098 1.00 34.31 P
ATOM 3 OP1 A A2020 47.619 117.257 106.306 1.00 34.80 O
ATOM 4 OP2 A A2020 48.236 117.007 103.808 1.00 32.04 O
ATOM 5 O5' A A2020 47.931 119.263 104.847 1.00 31.05 O
ATOM 6 C5' A A2020 47.396 120.048 105.898 1.00 30.75 C
ATOM 7 C4' A A2020 46.090 120.628 105.462 1.00 31.89 C
ATOM 8 O4' A A2020 45.202 119.543 105.095 1.00 32.38 O
ATOM 9 C3' A A2020 45.353 121.437 106.512 1.00 33.51 C
ATOM 10 O3' A A2020 44.598 122.423 105.820 1.00 39.09 O
ATOM 11 C2' A A2020 44.410 120.405 107.115 1.00 32.26 C
ATOM 12 O2' A A2020 43.273 121.004 107.703 1.00 35.22 O
ATOM 13 C1' A A2020 44.020 119.620 105.866 1.00 31.85 C
ATOM 14 N9 A A2020 43.509 118.262 106.060 1.00 30.85 N
ATOM 15 C8 A A2020 43.899 117.308 106.957 1.00 29.43 C
ATOM 16 N7 A A2020 43.256 116.172 106.834 1.00 31.23 N
ATOM 17 C5 A A2020 42.369 116.401 105.791 1.00 31.25 C
ATOM 18 C6 A A2020 41.400 115.582 105.157 1.00 31.98 C
ATOM 19 N6 A A2020 41.113 114.326 105.530 1.00 30.72 N
ATOM 20 N1 A A2020 40.716 116.112 104.121 1.00 31.50 N
ATOM 21 C2 A A2020 40.966 117.375 103.770 1.00 31.05 C
ATOM 22 N3 A A2020 41.830 118.243 104.295 1.00 32.10 N
ATOM 23 C4 A A2020 42.512 117.684 105.309 1.00 31.31 C
ATOM 24 P G A2021 45.197 123.903 105.621 1.00 41.95 P
ATOM 25 OP1 G A2021 45.556 124.034 104.179 1.00 42.55 O
ATOM 26 OP2 G A2021 46.225 124.176 106.671 1.00 40.65 O
ATOM 27 O5' G A2021 43.943 124.833 105.925 1.00 38.90 O
TER
ATOM 1 O3' A B2020 44.598 122.423 105.820 1.00 39.09 O
ATOM 2 P G B2021 45.197 123.903 105.621 1.00 41.95 P
ATOM 3 OP1 G B2021 45.556 124.034 104.179 1.00 42.55 O
ATOM 4 OP2 G B2021 46.225 124.176 106.671 1.00 40.65 O
ATOM 5 O5' G B2021 43.943 124.833 105.925 1.00 38.90 O
ATOM 6 C5' G B2021 43.410 124.908 107.256 1.00 36.45 C
ATOM 7 C4' G B2021 42.017 125.475 107.220 1.00 35.77 C
ATOM 8 O4' G B2021 42.068 126.739 106.515 1.00 35.85 O
ATOM 9 C3' G B2021 40.989 124.663 106.449 1.00 34.05 C
ATOM 10 O3' G B2021 40.415 123.654 107.265 1.00 32.15 O
ATOM 11 C2' G B2021 39.977 125.730 106.077 1.00 35.81 C
ATOM 12 O2' G B2021 39.210 126.108 107.202 1.00 38.24 O
ATOM 13 C1' G B2021 40.904 126.895 105.727 1.00 35.69 C
ATOM 14 N9 G B2021 41.328 126.948 104.330 1.00 36.83 N
ATOM 15 C8 G B2021 42.622 127.039 103.875 1.00 36.56 C
ATOM 16 N7 G B2021 42.705 127.110 102.575 1.00 37.27 N
ATOM 17 C5 G B2021 41.386 127.059 102.142 1.00 37.34 C
ATOM 18 C6 G B2021 40.850 127.116 100.833 1.00 37.97 C
ATOM 19 O6 G B2021 41.454 127.261 99.756 1.00 38.64 O
ATOM 20 N1 G B2021 39.461 127.003 100.844 1.00 38.54 N
ATOM 21 C2 G B2021 38.690 126.871 101.970 1.00 36.77 C
ATOM 22 N2 G B2021 37.373 126.761 101.777 1.00 36.64 N
ATOM 23 N3 G B2021 39.177 126.846 103.197 1.00 37.23 N
ATOM 24 C4 G B2021 40.523 126.941 103.209 1.00 37.07 C
ATOM 25 P U B2022 40.337 122.141 106.727 1.00 33.80 P
ATOM 26 OP1 U B2022 39.975 121.296 107.887 1.00 33.07 O
ATOM 27 OP2 U B2022 41.576 121.841 105.966 1.00 33.63 O
ATOM 28 O5' U B2022 39.135 122.150 105.683 1.00 30.87 O
TER
ATOM 2 P A A2020 48.337 117.752 105.098 1.00 34.31 P
ATOM 3 OP1 A A2020 47.619 117.257 106.306 1.00 34.80 O
ATOM 4 OP2 A A2020 48.236 117.007 103.808 1.00 32.04 O
ATOM 5 O5' A A2020 47.931 119.263 104.847 1.00 31.05 O
ATOM 6 C5' A A2020 47.396 120.048 105.898 1.00 30.75 C
ATOM 7 C4' A A2020 46.090 120.628 105.462 1.00 31.89 C
ATOM 8 O4' A A2020 45.202 119.543 105.095 1.00 32.38 O
ATOM 9 C3' A A2020 45.353 121.437 106.512 1.00 33.51 C
ATOM 10 O3' A A2020 44.598 122.423 105.820 1.00 39.09 O
ATOM 11 C2' A A2020 44.410 120.405 107.115 1.00 32.26 C
ATOM 12 O2' A A2020 43.273 121.004 107.703 1.00 35.22 O
ATOM 13 C1' A A2020 44.020 119.620 105.866 1.00 31.85 C
ATOM 14 N9 A A2020 43.509 118.262 106.060 1.00 30.85 N
ATOM 15 C8 A A2020 43.899 117.308 106.957 1.00 29.43 C
ATOM 16 N7 A A2020 43.256 116.172 106.834 1.00 31.23 N
ATOM 17 C5 A A2020 42.369 116.401 105.791 1.00 31.25 C
ATOM 18 C6 A A2020 41.400 115.582 105.157 1.00 31.98 C
ATOM 19 N6 A A2020 41.113 114.326 105.530 1.00 30.72 N
ATOM 20 N1 A A2020 40.716 116.112 104.121 1.00 31.50 N
ATOM 21 C2 A A2020 40.966 117.375 103.770 1.00 31.05 C
ATOM 22 N3 A A2020 41.830 118.243 104.295 1.00 32.10 N
ATOM 23 C4 A A2020 42.512 117.684 105.309 1.00 31.31 C
ATOM 24 P G A2021 45.197 123.903 105.621 1.00 41.95 P
ATOM 25 OP1 G A2021 45.556 124.034 104.179 1.00 42.55 O
ATOM 26 OP2 G A2021 46.225 124.176 106.671 1.00 40.65 O
ATOM 27 O5' G A2021 43.943 124.833 105.925 1.00 38.90 O
TER
ATOM 1 O3' A B2020 44.598 122.423 105.820 1.00 39.09 O
ATOM 2 P G B2021 45.197 123.903 105.621 1.00 41.95 P
ATOM 3 OP1 G B2021 45.556 124.034 104.179 1.00 42.55 O
ATOM 4 OP2 G B2021 46.225 124.176 106.671 1.00 40.65 O
ATOM 5 O5' G B2021 43.943 124.833 105.925 1.00 38.90 O
ATOM 6 C5' G B2021 43.410 124.908 107.256 1.00 36.45 C
ATOM 7 C4' G B2021 42.017 125.475 107.220 1.00 35.77 C
ATOM 8 O4' G B2021 42.068 126.739 106.515 1.00 35.85 O
ATOM 9 C3' G B2021 40.989 124.663 106.449 1.00 34.05 C
ATOM 10 O3' G B2021 40.415 123.654 107.265 1.00 32.15 O
ATOM 11 C2' G B2021 39.977 125.730 106.077 1.00 35.81 C
ATOM 12 O2' G B2021 39.210 126.108 107.202 1.00 38.24 O
ATOM 13 C1' G B2021 40.904 126.895 105.727 1.00 35.69 C
ATOM 14 N9 G B2021 41.328 126.948 104.330 1.00 36.83 N
ATOM 15 C8 G B2021 42.622 127.039 103.875 1.00 36.56 C
ATOM 16 N7 G B2021 42.705 127.110 102.575 1.00 37.27 N
ATOM 17 C5 G B2021 41.386 127.059 102.142 1.00 37.34 C
ATOM 18 C6 G B2021 40.850 127.116 100.833 1.00 37.97 C
ATOM 19 O6 G B2021 41.454 127.261 99.756 1.00 38.64 O
ATOM 20 N1 G B2021 39.461 127.003 100.844 1.00 38.54 N
ATOM 21 C2 G B2021 38.690 126.871 101.970 1.00 36.77 C
ATOM 22 N2 G B2021 37.373 126.761 101.777 1.00 36.64 N
ATOM 23 N3 G B2021 39.177 126.846 103.197 1.00 37.23 N
ATOM 24 C4 G B2021 40.523 126.941 103.209 1.00 37.07 C
ATOM 25 P U B2022 40.337 122.141 106.727 1.00 33.80 P
ATOM 26 OP1 U B2022 39.975 121.296 107.887 1.00 33.07 O
ATOM 27 OP2 U B2022 41.576 121.841 105.966 1.00 33.63 O
ATOM 28 O5' U B2022 39.135 122.150 105.683 1.00 30.87 O
TER
Atoms:
OP1: (47.619,117.257,106.306)
OP2: (48.236,117.007,103.808)
C3': (45.353,121.437,106.512)
C1': (44.020,119.620,105.866)
C5': (47.396,120.048,105.898)
O4': (45.202,119.543,105.095)
C8: (43.899,117.308,106.957)
O2': (43.273,121.004,107.703)
C6: (41.400,115.582,105.157)
C5: (42.369,116.401,105.791)
C4: (42.512,117.684,105.309)
P: (48.337,117.752,105.098)
C4': (46.090,120.628,105.462)
C2': (44.410,120.405,107.115)
C2: (40.966,117.375,103.770)
N1: (40.716,116.112,104.121)
N3: (41.830,118.243,104.295)
N6: (41.113,114.326,105.530)
N7: (43.256,116.172,106.834)
N9: (43.509,118.262,106.060)
O5': (47.931,119.263,104.847)
O3': (44.598,122.423,105.820)
OP2: (48.236,117.007,103.808)
C3': (45.353,121.437,106.512)
C1': (44.020,119.620,105.866)
C5': (47.396,120.048,105.898)
O4': (45.202,119.543,105.095)
C8: (43.899,117.308,106.957)
O2': (43.273,121.004,107.703)
C6: (41.400,115.582,105.157)
C5: (42.369,116.401,105.791)
C4: (42.512,117.684,105.309)
P: (48.337,117.752,105.098)
C4': (46.090,120.628,105.462)
C2': (44.410,120.405,107.115)
C2: (40.966,117.375,103.770)
N1: (40.716,116.112,104.121)
N3: (41.830,118.243,104.295)
N6: (41.113,114.326,105.530)
N7: (43.256,116.172,106.834)
N9: (43.509,118.262,106.060)
O5': (47.931,119.263,104.847)
O3': (44.598,122.423,105.820)
OP1: (45.556,124.034,104.179)
OP2: (46.225,124.176,106.671)
C3': (40.989,124.663,106.449)
C1': (40.904,126.895,105.727)
C5': (43.410,124.908,107.256)
O6: (41.454,127.261,99.756)
O4': (42.068,126.739,106.515)
C8: (42.622,127.039,103.875)
C2: (38.690,126.871,101.970)
C6: (40.850,127.116,100.833)
C5: (41.386,127.059,102.142)
C4: (40.523,126.941,103.209)
P: (45.197,123.903,105.621)
C4': (42.017,125.475,107.220)
C2': (39.977,125.730,106.077)
O2': (39.210,126.108,107.202)
N1: (39.461,127.003,100.844)
N2: (37.373,126.761,101.777)
N3: (39.177,126.846,103.197)
N7: (42.705,127.110,102.575)
N9: (41.328,126.948,104.330)
O5': (43.943,124.833,105.925)
O3': (40.415,123.654,107.265)
OP2: (46.225,124.176,106.671)
C3': (40.989,124.663,106.449)
C1': (40.904,126.895,105.727)
C5': (43.410,124.908,107.256)
O6: (41.454,127.261,99.756)
O4': (42.068,126.739,106.515)
C8: (42.622,127.039,103.875)
C2: (38.690,126.871,101.970)
C6: (40.850,127.116,100.833)
C5: (41.386,127.059,102.142)
C4: (40.523,126.941,103.209)
P: (45.197,123.903,105.621)
C4': (42.017,125.475,107.220)
C2': (39.977,125.730,106.077)
O2': (39.210,126.108,107.202)
N1: (39.461,127.003,100.844)
N2: (37.373,126.761,101.777)
N3: (39.177,126.846,103.197)
N7: (42.705,127.110,102.575)
N9: (41.328,126.948,104.330)
O5': (43.943,124.833,105.925)
O3': (40.415,123.654,107.265)
Image (generated by PyMOL):