ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:02020:02021

Extra

PDB:
ATOM 1 O3' G A2019 49.993 117.744 105.704 1.00 38.14 O
ATOM 2 P A A2020 48.451 117.621 105.298 1.00 38.37 P
ATOM 3 OP1 A A2020 47.742 117.136 106.510 1.00 38.78 O
ATOM 4 OP2 A A2020 48.338 116.864 104.024 1.00 37.68 O
ATOM 5 O5' A A2020 47.996 119.114 105.013 1.00 38.58 O
ATOM 6 C5' A A2020 47.469 119.926 106.055 1.00 34.62 C
ATOM 7 C4' A A2020 46.142 120.489 105.633 1.00 37.27 C
ATOM 8 O4' A A2020 45.228 119.407 105.287 1.00 37.48 O
ATOM 9 C3' A A2020 45.439 121.301 106.706 1.00 37.14 C
ATOM 10 O3' A A2020 44.636 122.270 106.047 1.00 43.31 O
ATOM 11 C2' A A2020 44.531 120.261 107.349 1.00 35.21 C
ATOM 12 O2' A A2020 43.429 120.850 107.995 1.00 35.72 O
ATOM 13 C1' A A2020 44.082 119.486 106.111 1.00 36.10 C
ATOM 14 N9 A A2020 43.552 118.138 106.323 1.00 33.88 N
ATOM 15 C8 A A2020 43.903 117.188 107.246 1.00 31.13 C
ATOM 16 N7 A A2020 43.233 116.070 107.131 1.00 31.45 N
ATOM 17 C5 A A2020 42.374 116.301 106.064 1.00 31.96 C
ATOM 18 C6 A A2020 41.391 115.499 105.425 1.00 31.13 C
ATOM 19 N6 A A2020 41.080 114.251 105.796 1.00 24.97 N
ATOM 20 N1 A A2020 40.725 116.040 104.382 1.00 31.01 N
ATOM 21 C2 A A2020 41.014 117.286 104.016 1.00 32.50 C
ATOM 22 N3 A A2020 41.901 118.135 104.535 1.00 33.86 N
ATOM 23 C4 A A2020 42.556 117.572 105.564 1.00 32.96 C
ATOM 24 P G A2021 45.239 123.718 105.705 1.00 45.22 P
ATOM 25 OP1 G A2021 45.498 123.750 104.241 1.00 45.30 O
ATOM 26 OP2 G A2021 46.336 124.030 106.655 1.00 44.59 O
ATOM 27 O5' G A2021 44.024 124.688 106.035 1.00 41.76 O
TER

ATOM 1 O3' A B2020 44.636 122.270 106.047 1.00 43.31 O
ATOM 2 P G B2021 45.239 123.718 105.705 1.00 45.22 P
ATOM 3 OP1 G B2021 45.498 123.750 104.241 1.00 45.30 O
ATOM 4 OP2 G B2021 46.336 124.030 106.655 1.00 44.59 O
ATOM 5 O5' G B2021 44.024 124.688 106.035 1.00 41.76 O
ATOM 6 C5' G B2021 43.527 124.794 107.378 1.00 38.45 C
ATOM 7 C4' G B2021 42.142 125.388 107.367 1.00 39.03 C
ATOM 8 O4' G B2021 42.194 126.644 106.649 1.00 37.28 O
ATOM 9 C3' G B2021 41.078 124.582 106.641 1.00 37.53 C
ATOM 10 O3' G B2021 40.513 123.590 107.498 1.00 37.92 O
ATOM 11 C2' G B2021 40.077 125.661 106.263 1.00 37.78 C
ATOM 12 O2' G B2021 39.295 126.067 107.369 1.00 35.74 O
ATOM 13 C1' G B2021 41.014 126.813 105.894 1.00 37.86 C
ATOM 14 N9 G B2021 41.401 126.894 104.486 1.00 39.24 N
ATOM 15 C8 G B2021 42.678 127.030 103.998 1.00 37.67 C
ATOM 16 N7 G B2021 42.724 127.138 102.700 1.00 37.75 N
ATOM 17 C5 G B2021 41.398 127.057 102.301 1.00 39.17 C
ATOM 18 C6 G B2021 40.828 127.124 101.011 1.00 39.13 C
ATOM 19 O6 G B2021 41.397 127.315 99.929 1.00 40.05 O
ATOM 20 N1 G B2021 39.446 126.962 101.055 1.00 40.46 N
ATOM 21 C2 G B2021 38.707 126.788 102.198 1.00 38.67 C
ATOM 22 N2 G B2021 37.385 126.650 102.037 1.00 35.30 N
ATOM 23 N3 G B2021 39.227 126.752 103.411 1.00 38.91 N
ATOM 24 C4 G B2021 40.568 126.886 103.389 1.00 38.92 C
ATOM 25 P U B2022 40.350 122.080 106.973 1.00 37.64 P
ATOM 26 OP1 U B2022 39.891 121.267 108.115 1.00 38.16 O
ATOM 27 OP2 U B2022 41.581 121.699 106.258 1.00 37.29 O
ATOM 28 O5' U B2022 39.165 122.159 105.915 1.00 38.11 O
TER

Atoms:
OP1: (47.742,117.136,106.510)
OP2: (48.338,116.864,104.024)
C3': (45.439,121.301,106.706)
C1': (44.082,119.486,106.111)
C5': (47.469,119.926,106.055)
O4': (45.228,119.407,105.287)
C8: (43.903,117.188,107.246)
O2': (43.429,120.850,107.995)
C6: (41.391,115.499,105.425)
C5: (42.374,116.301,106.064)
C4: (42.556,117.572,105.564)
P: (48.451,117.621,105.298)
C4': (46.142,120.489,105.633)
C2': (44.531,120.261,107.349)
C2: (41.014,117.286,104.016)
N1: (40.725,116.040,104.382)
N3: (41.901,118.135,104.535)
N6: (41.080,114.251,105.796)
N7: (43.233,116.070,107.131)
N9: (43.552,118.138,106.323)
O5': (47.996,119.114,105.013)
O3': (44.636,122.270,106.047)
OP1: (45.498,123.750,104.241)
OP2: (46.336,124.030,106.655)
C3': (41.078,124.582,106.641)
C1': (41.014,126.813,105.894)
C5': (43.527,124.794,107.378)
O6: (41.397,127.315,99.929)
O4': (42.194,126.644,106.649)
C8: (42.678,127.030,103.998)
C2: (38.707,126.788,102.198)
C6: (40.828,127.124,101.011)
C5: (41.398,127.057,102.301)
C4: (40.568,126.886,103.389)
P: (45.239,123.718,105.705)
C4': (42.142,125.388,107.367)
C2': (40.077,125.661,106.263)
O2': (39.295,126.067,107.369)
N1: (39.446,126.962,101.055)
N2: (37.385,126.650,102.037)
N3: (39.227,126.752,103.411)
N7: (42.724,127.138,102.700)
N9: (41.401,126.894,104.486)
O5': (44.024,124.688,106.035)
O3': (40.513,123.590,107.498)
Image (generated by PyMOL):
PyMOL image
show in jmol