Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:02020:02021
Extra
PDB:
ATOM 1 O3' G A2019 49.898 117.849 105.739 1.00 40.47 O
ATOM 2 P A A2020 48.356 117.785 105.318 1.00 39.22 P
ATOM 3 OP1 A A2020 47.648 117.245 106.498 1.00 41.69 O
ATOM 4 OP2 A A2020 48.233 117.104 104.012 1.00 38.69 O
ATOM 5 O5' A A2020 47.933 119.296 105.102 1.00 39.06 O
ATOM 6 C5' A A2020 47.334 120.039 106.144 1.00 36.18 C
ATOM 7 C4' A A2020 46.030 120.598 105.669 1.00 39.75 C
ATOM 8 O4' A A2020 45.149 119.512 105.275 1.00 40.80 O
ATOM 9 C3' A A2020 45.266 121.399 106.707 1.00 41.13 C
ATOM 10 O3' A A2020 44.498 122.358 105.998 1.00 47.39 O
ATOM 11 C2' A A2020 44.333 120.352 107.301 1.00 39.74 C
ATOM 12 O2' A A2020 43.176 120.926 107.864 1.00 40.65 O
ATOM 13 C1' A A2020 43.964 119.568 106.048 1.00 40.01 C
ATOM 14 N9 A A2020 43.460 118.208 106.252 1.00 37.97 N
ATOM 15 C8 A A2020 43.859 117.251 107.148 1.00 35.26 C
ATOM 16 N7 A A2020 43.209 116.117 107.031 1.00 35.71 N
ATOM 17 C5 A A2020 42.314 116.348 105.995 1.00 36.71 C
ATOM 18 C6 A A2020 41.334 115.533 105.370 1.00 36.76 C
ATOM 19 N6 A A2020 41.066 114.273 105.728 1.00 33.79 N
ATOM 20 N1 A A2020 40.628 116.073 104.355 1.00 34.89 N
ATOM 21 C2 A A2020 40.875 117.335 104.005 1.00 35.19 C
ATOM 22 N3 A A2020 41.755 118.198 104.516 1.00 36.13 N
ATOM 23 C4 A A2020 42.452 117.634 105.514 1.00 36.40 C
ATOM 24 P G A2021 45.120 123.801 105.670 1.00 49.51 P
ATOM 25 OP1 G A2021 45.361 123.838 104.203 1.00 48.38 O
ATOM 26 OP2 G A2021 46.236 124.068 106.612 1.00 48.97 O
ATOM 27 O5' G A2021 43.926 124.788 106.027 1.00 48.06 O
TER
ATOM 1 O3' A B2020 44.498 122.358 105.998 1.00 47.39 O
ATOM 2 P G B2021 45.120 123.801 105.670 1.00 49.51 P
ATOM 3 OP1 G B2021 45.361 123.838 104.203 1.00 48.38 O
ATOM 4 OP2 G B2021 46.236 124.068 106.612 1.00 48.97 O
ATOM 5 O5' G B2021 43.926 124.788 106.027 1.00 48.06 O
ATOM 6 C5' G B2021 43.402 124.834 107.368 1.00 44.54 C
ATOM 7 C4' G B2021 42.014 125.425 107.366 1.00 43.88 C
ATOM 8 O4' G B2021 42.068 126.688 106.658 1.00 41.49 O
ATOM 9 C3' G B2021 40.941 124.631 106.635 1.00 40.97 C
ATOM 10 O3' G B2021 40.366 123.627 107.474 1.00 39.02 O
ATOM 11 C2' G B2021 39.946 125.722 106.278 1.00 41.71 C
ATOM 12 O2' G B2021 39.189 126.135 107.398 1.00 39.88 O
ATOM 13 C1' G B2021 40.888 126.865 105.905 1.00 40.85 C
ATOM 14 N9 G B2021 41.273 126.932 104.497 1.00 43.25 N
ATOM 15 C8 G B2021 42.550 127.073 104.007 1.00 41.29 C
ATOM 16 N7 G B2021 42.594 127.167 102.708 1.00 40.30 N
ATOM 17 C5 G B2021 41.269 127.071 102.311 1.00 41.74 C
ATOM 18 C6 G B2021 40.702 127.122 101.023 1.00 42.36 C
ATOM 19 O6 G B2021 41.277 127.297 99.941 1.00 42.01 O
ATOM 20 N1 G B2021 39.318 126.959 101.066 1.00 42.53 N
ATOM 21 C2 G B2021 38.579 126.794 102.213 1.00 40.29 C
ATOM 22 N2 G B2021 37.255 126.661 102.064 1.00 38.67 N
ATOM 23 N3 G B2021 39.100 126.763 103.421 1.00 40.54 N
ATOM 24 C4 G B2021 40.440 126.904 103.399 1.00 41.53 C
ATOM 25 P U B2022 40.225 122.121 106.933 1.00 39.27 P
ATOM 26 OP1 U B2022 39.824 121.260 108.057 1.00 40.42 O
ATOM 27 OP2 U B2022 41.444 121.793 106.170 1.00 40.31 O
ATOM 28 O5' U B2022 39.022 122.184 105.896 1.00 39.59 O
TER
ATOM 2 P A A2020 48.356 117.785 105.318 1.00 39.22 P
ATOM 3 OP1 A A2020 47.648 117.245 106.498 1.00 41.69 O
ATOM 4 OP2 A A2020 48.233 117.104 104.012 1.00 38.69 O
ATOM 5 O5' A A2020 47.933 119.296 105.102 1.00 39.06 O
ATOM 6 C5' A A2020 47.334 120.039 106.144 1.00 36.18 C
ATOM 7 C4' A A2020 46.030 120.598 105.669 1.00 39.75 C
ATOM 8 O4' A A2020 45.149 119.512 105.275 1.00 40.80 O
ATOM 9 C3' A A2020 45.266 121.399 106.707 1.00 41.13 C
ATOM 10 O3' A A2020 44.498 122.358 105.998 1.00 47.39 O
ATOM 11 C2' A A2020 44.333 120.352 107.301 1.00 39.74 C
ATOM 12 O2' A A2020 43.176 120.926 107.864 1.00 40.65 O
ATOM 13 C1' A A2020 43.964 119.568 106.048 1.00 40.01 C
ATOM 14 N9 A A2020 43.460 118.208 106.252 1.00 37.97 N
ATOM 15 C8 A A2020 43.859 117.251 107.148 1.00 35.26 C
ATOM 16 N7 A A2020 43.209 116.117 107.031 1.00 35.71 N
ATOM 17 C5 A A2020 42.314 116.348 105.995 1.00 36.71 C
ATOM 18 C6 A A2020 41.334 115.533 105.370 1.00 36.76 C
ATOM 19 N6 A A2020 41.066 114.273 105.728 1.00 33.79 N
ATOM 20 N1 A A2020 40.628 116.073 104.355 1.00 34.89 N
ATOM 21 C2 A A2020 40.875 117.335 104.005 1.00 35.19 C
ATOM 22 N3 A A2020 41.755 118.198 104.516 1.00 36.13 N
ATOM 23 C4 A A2020 42.452 117.634 105.514 1.00 36.40 C
ATOM 24 P G A2021 45.120 123.801 105.670 1.00 49.51 P
ATOM 25 OP1 G A2021 45.361 123.838 104.203 1.00 48.38 O
ATOM 26 OP2 G A2021 46.236 124.068 106.612 1.00 48.97 O
ATOM 27 O5' G A2021 43.926 124.788 106.027 1.00 48.06 O
TER
ATOM 1 O3' A B2020 44.498 122.358 105.998 1.00 47.39 O
ATOM 2 P G B2021 45.120 123.801 105.670 1.00 49.51 P
ATOM 3 OP1 G B2021 45.361 123.838 104.203 1.00 48.38 O
ATOM 4 OP2 G B2021 46.236 124.068 106.612 1.00 48.97 O
ATOM 5 O5' G B2021 43.926 124.788 106.027 1.00 48.06 O
ATOM 6 C5' G B2021 43.402 124.834 107.368 1.00 44.54 C
ATOM 7 C4' G B2021 42.014 125.425 107.366 1.00 43.88 C
ATOM 8 O4' G B2021 42.068 126.688 106.658 1.00 41.49 O
ATOM 9 C3' G B2021 40.941 124.631 106.635 1.00 40.97 C
ATOM 10 O3' G B2021 40.366 123.627 107.474 1.00 39.02 O
ATOM 11 C2' G B2021 39.946 125.722 106.278 1.00 41.71 C
ATOM 12 O2' G B2021 39.189 126.135 107.398 1.00 39.88 O
ATOM 13 C1' G B2021 40.888 126.865 105.905 1.00 40.85 C
ATOM 14 N9 G B2021 41.273 126.932 104.497 1.00 43.25 N
ATOM 15 C8 G B2021 42.550 127.073 104.007 1.00 41.29 C
ATOM 16 N7 G B2021 42.594 127.167 102.708 1.00 40.30 N
ATOM 17 C5 G B2021 41.269 127.071 102.311 1.00 41.74 C
ATOM 18 C6 G B2021 40.702 127.122 101.023 1.00 42.36 C
ATOM 19 O6 G B2021 41.277 127.297 99.941 1.00 42.01 O
ATOM 20 N1 G B2021 39.318 126.959 101.066 1.00 42.53 N
ATOM 21 C2 G B2021 38.579 126.794 102.213 1.00 40.29 C
ATOM 22 N2 G B2021 37.255 126.661 102.064 1.00 38.67 N
ATOM 23 N3 G B2021 39.100 126.763 103.421 1.00 40.54 N
ATOM 24 C4 G B2021 40.440 126.904 103.399 1.00 41.53 C
ATOM 25 P U B2022 40.225 122.121 106.933 1.00 39.27 P
ATOM 26 OP1 U B2022 39.824 121.260 108.057 1.00 40.42 O
ATOM 27 OP2 U B2022 41.444 121.793 106.170 1.00 40.31 O
ATOM 28 O5' U B2022 39.022 122.184 105.896 1.00 39.59 O
TER
Atoms:
OP1: (47.648,117.245,106.498)
OP2: (48.233,117.104,104.012)
C3': (45.266,121.399,106.707)
C1': (43.964,119.568,106.048)
C5': (47.334,120.039,106.144)
O4': (45.149,119.512,105.275)
C8: (43.859,117.251,107.148)
O2': (43.176,120.926,107.864)
C6: (41.334,115.533,105.370)
C5: (42.314,116.348,105.995)
C4: (42.452,117.634,105.514)
P: (48.356,117.785,105.318)
C4': (46.030,120.598,105.669)
C2': (44.333,120.352,107.301)
C2: (40.875,117.335,104.005)
N1: (40.628,116.073,104.355)
N3: (41.755,118.198,104.516)
N6: (41.066,114.273,105.728)
N7: (43.209,116.117,107.031)
N9: (43.460,118.208,106.252)
O5': (47.933,119.296,105.102)
O3': (44.498,122.358,105.998)
OP2: (48.233,117.104,104.012)
C3': (45.266,121.399,106.707)
C1': (43.964,119.568,106.048)
C5': (47.334,120.039,106.144)
O4': (45.149,119.512,105.275)
C8: (43.859,117.251,107.148)
O2': (43.176,120.926,107.864)
C6: (41.334,115.533,105.370)
C5: (42.314,116.348,105.995)
C4: (42.452,117.634,105.514)
P: (48.356,117.785,105.318)
C4': (46.030,120.598,105.669)
C2': (44.333,120.352,107.301)
C2: (40.875,117.335,104.005)
N1: (40.628,116.073,104.355)
N3: (41.755,118.198,104.516)
N6: (41.066,114.273,105.728)
N7: (43.209,116.117,107.031)
N9: (43.460,118.208,106.252)
O5': (47.933,119.296,105.102)
O3': (44.498,122.358,105.998)
OP1: (45.361,123.838,104.203)
OP2: (46.236,124.068,106.612)
C3': (40.941,124.631,106.635)
C1': (40.888,126.865,105.905)
C5': (43.402,124.834,107.368)
O6: (41.277,127.297,99.941)
O4': (42.068,126.688,106.658)
C8: (42.550,127.073,104.007)
C2: (38.579,126.794,102.213)
C6: (40.702,127.122,101.023)
C5: (41.269,127.071,102.311)
C4: (40.440,126.904,103.399)
P: (45.120,123.801,105.670)
C4': (42.014,125.425,107.366)
C2': (39.946,125.722,106.278)
O2': (39.189,126.135,107.398)
N1: (39.318,126.959,101.066)
N2: (37.255,126.661,102.064)
N3: (39.100,126.763,103.421)
N7: (42.594,127.167,102.708)
N9: (41.273,126.932,104.497)
O5': (43.926,124.788,106.027)
O3': (40.366,123.627,107.474)
OP2: (46.236,124.068,106.612)
C3': (40.941,124.631,106.635)
C1': (40.888,126.865,105.905)
C5': (43.402,124.834,107.368)
O6: (41.277,127.297,99.941)
O4': (42.068,126.688,106.658)
C8: (42.550,127.073,104.007)
C2: (38.579,126.794,102.213)
C6: (40.702,127.122,101.023)
C5: (41.269,127.071,102.311)
C4: (40.440,126.904,103.399)
P: (45.120,123.801,105.670)
C4': (42.014,125.425,107.366)
C2': (39.946,125.722,106.278)
O2': (39.189,126.135,107.398)
N1: (39.318,126.959,101.066)
N2: (37.255,126.661,102.064)
N3: (39.100,126.763,103.421)
N7: (42.594,127.167,102.708)
N9: (41.273,126.932,104.497)
O5': (43.926,124.788,106.027)
O3': (40.366,123.627,107.474)
Image (generated by PyMOL):