Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:02020:02021
Extra
PDB:
ATOM 1 O3' G A2019 50.069 118.235 105.699 1.00 38.97 O
ATOM 2 P A A2020 48.529 118.162 105.269 1.00 39.19 P
ATOM 3 OP1 A A2020 47.794 117.616 106.440 1.00 39.75 O
ATOM 4 OP2 A A2020 48.413 117.483 103.953 1.00 40.03 O
ATOM 5 O5' A A2020 48.125 119.678 105.052 1.00 40.54 O
ATOM 6 C5' A A2020 47.513 120.433 106.088 1.00 36.85 C
ATOM 7 C4' A A2020 46.203 120.976 105.596 1.00 40.00 C
ATOM 8 O4' A A2020 45.321 119.868 105.245 1.00 39.73 O
ATOM 9 C3' A A2020 45.436 121.809 106.609 1.00 40.51 C
ATOM 10 O3' A A2020 44.642 122.724 105.864 1.00 43.87 O
ATOM 11 C2' A A2020 44.526 120.762 107.250 1.00 38.92 C
ATOM 12 O2' A A2020 43.374 121.310 107.844 1.00 37.94 O
ATOM 13 C1' A A2020 44.141 119.953 106.017 1.00 38.35 C
ATOM 14 N9 A A2020 43.607 118.608 106.233 1.00 37.84 N
ATOM 15 C8 A A2020 43.934 117.662 107.171 1.00 33.73 C
ATOM 16 N7 A A2020 43.249 116.550 107.054 1.00 35.25 N
ATOM 17 C5 A A2020 42.413 116.783 105.968 1.00 33.89 C
ATOM 18 C6 A A2020 41.429 115.990 105.322 1.00 34.52 C
ATOM 19 N6 A A2020 41.093 114.750 105.703 1.00 27.51 N
ATOM 20 N1 A A2020 40.789 116.530 104.260 1.00 32.43 N
ATOM 21 C2 A A2020 41.104 117.768 103.888 1.00 34.30 C
ATOM 22 N3 A A2020 41.997 118.607 104.412 1.00 34.14 N
ATOM 23 C4 A A2020 42.623 118.045 105.458 1.00 34.48 C
ATOM 24 P G A2021 45.220 124.173 105.480 1.00 45.83 P
ATOM 25 OP1 G A2021 45.355 124.196 103.998 1.00 45.14 O
ATOM 26 OP2 G A2021 46.384 124.511 106.331 1.00 45.21 O
ATOM 27 O5' G A2021 44.040 125.149 105.898 1.00 41.83 O
TER
ATOM 1 O3' A B2020 44.642 122.724 105.864 1.00 43.87 O
ATOM 2 P G B2021 45.220 124.173 105.480 1.00 45.83 P
ATOM 3 OP1 G B2021 45.355 124.196 103.998 1.00 45.14 O
ATOM 4 OP2 G B2021 46.384 124.511 106.331 1.00 45.21 O
ATOM 5 O5' G B2021 44.040 125.149 105.898 1.00 41.83 O
ATOM 6 C5' G B2021 43.612 125.223 107.268 1.00 39.97 C
ATOM 7 C4' G B2021 42.240 125.841 107.340 1.00 39.99 C
ATOM 8 O4' G B2021 42.288 127.122 106.664 1.00 38.81 O
ATOM 9 C3' G B2021 41.139 125.077 106.623 1.00 38.20 C
ATOM 10 O3' G B2021 40.574 124.072 107.460 1.00 40.20 O
ATOM 11 C2' G B2021 40.150 126.183 106.304 1.00 38.47 C
ATOM 12 O2' G B2021 39.404 126.569 107.441 1.00 37.22 O
ATOM 13 C1' G B2021 41.098 127.321 105.926 1.00 38.82 C
ATOM 14 N9 G B2021 41.465 127.389 104.510 1.00 39.90 N
ATOM 15 C8 G B2021 42.736 127.516 104.001 1.00 38.72 C
ATOM 16 N7 G B2021 42.763 127.609 102.698 1.00 39.81 N
ATOM 17 C5 G B2021 41.431 127.532 102.319 1.00 39.49 C
ATOM 18 C6 G B2021 40.844 127.586 101.036 1.00 39.58 C
ATOM 19 O6 G B2021 41.399 127.745 99.942 1.00 40.17 O
ATOM 20 N1 G B2021 39.461 127.438 101.100 1.00 41.13 N
ATOM 21 C2 G B2021 38.735 127.269 102.253 1.00 39.62 C
ATOM 22 N2 G B2021 37.408 127.121 102.104 1.00 35.23 N
ATOM 23 N3 G B2021 39.271 127.242 103.462 1.00 39.37 N
ATOM 24 C4 G B2021 40.614 127.375 103.422 1.00 39.78 C
ATOM 25 P U B2022 40.396 122.579 106.904 1.00 38.07 P
ATOM 26 OP1 U B2022 39.974 121.743 108.039 1.00 39.88 O
ATOM 27 OP2 U B2022 41.602 122.209 106.132 1.00 38.51 O
ATOM 28 O5' U B2022 39.196 122.679 105.867 1.00 39.76 O
TER
ATOM 2 P A A2020 48.529 118.162 105.269 1.00 39.19 P
ATOM 3 OP1 A A2020 47.794 117.616 106.440 1.00 39.75 O
ATOM 4 OP2 A A2020 48.413 117.483 103.953 1.00 40.03 O
ATOM 5 O5' A A2020 48.125 119.678 105.052 1.00 40.54 O
ATOM 6 C5' A A2020 47.513 120.433 106.088 1.00 36.85 C
ATOM 7 C4' A A2020 46.203 120.976 105.596 1.00 40.00 C
ATOM 8 O4' A A2020 45.321 119.868 105.245 1.00 39.73 O
ATOM 9 C3' A A2020 45.436 121.809 106.609 1.00 40.51 C
ATOM 10 O3' A A2020 44.642 122.724 105.864 1.00 43.87 O
ATOM 11 C2' A A2020 44.526 120.762 107.250 1.00 38.92 C
ATOM 12 O2' A A2020 43.374 121.310 107.844 1.00 37.94 O
ATOM 13 C1' A A2020 44.141 119.953 106.017 1.00 38.35 C
ATOM 14 N9 A A2020 43.607 118.608 106.233 1.00 37.84 N
ATOM 15 C8 A A2020 43.934 117.662 107.171 1.00 33.73 C
ATOM 16 N7 A A2020 43.249 116.550 107.054 1.00 35.25 N
ATOM 17 C5 A A2020 42.413 116.783 105.968 1.00 33.89 C
ATOM 18 C6 A A2020 41.429 115.990 105.322 1.00 34.52 C
ATOM 19 N6 A A2020 41.093 114.750 105.703 1.00 27.51 N
ATOM 20 N1 A A2020 40.789 116.530 104.260 1.00 32.43 N
ATOM 21 C2 A A2020 41.104 117.768 103.888 1.00 34.30 C
ATOM 22 N3 A A2020 41.997 118.607 104.412 1.00 34.14 N
ATOM 23 C4 A A2020 42.623 118.045 105.458 1.00 34.48 C
ATOM 24 P G A2021 45.220 124.173 105.480 1.00 45.83 P
ATOM 25 OP1 G A2021 45.355 124.196 103.998 1.00 45.14 O
ATOM 26 OP2 G A2021 46.384 124.511 106.331 1.00 45.21 O
ATOM 27 O5' G A2021 44.040 125.149 105.898 1.00 41.83 O
TER
ATOM 1 O3' A B2020 44.642 122.724 105.864 1.00 43.87 O
ATOM 2 P G B2021 45.220 124.173 105.480 1.00 45.83 P
ATOM 3 OP1 G B2021 45.355 124.196 103.998 1.00 45.14 O
ATOM 4 OP2 G B2021 46.384 124.511 106.331 1.00 45.21 O
ATOM 5 O5' G B2021 44.040 125.149 105.898 1.00 41.83 O
ATOM 6 C5' G B2021 43.612 125.223 107.268 1.00 39.97 C
ATOM 7 C4' G B2021 42.240 125.841 107.340 1.00 39.99 C
ATOM 8 O4' G B2021 42.288 127.122 106.664 1.00 38.81 O
ATOM 9 C3' G B2021 41.139 125.077 106.623 1.00 38.20 C
ATOM 10 O3' G B2021 40.574 124.072 107.460 1.00 40.20 O
ATOM 11 C2' G B2021 40.150 126.183 106.304 1.00 38.47 C
ATOM 12 O2' G B2021 39.404 126.569 107.441 1.00 37.22 O
ATOM 13 C1' G B2021 41.098 127.321 105.926 1.00 38.82 C
ATOM 14 N9 G B2021 41.465 127.389 104.510 1.00 39.90 N
ATOM 15 C8 G B2021 42.736 127.516 104.001 1.00 38.72 C
ATOM 16 N7 G B2021 42.763 127.609 102.698 1.00 39.81 N
ATOM 17 C5 G B2021 41.431 127.532 102.319 1.00 39.49 C
ATOM 18 C6 G B2021 40.844 127.586 101.036 1.00 39.58 C
ATOM 19 O6 G B2021 41.399 127.745 99.942 1.00 40.17 O
ATOM 20 N1 G B2021 39.461 127.438 101.100 1.00 41.13 N
ATOM 21 C2 G B2021 38.735 127.269 102.253 1.00 39.62 C
ATOM 22 N2 G B2021 37.408 127.121 102.104 1.00 35.23 N
ATOM 23 N3 G B2021 39.271 127.242 103.462 1.00 39.37 N
ATOM 24 C4 G B2021 40.614 127.375 103.422 1.00 39.78 C
ATOM 25 P U B2022 40.396 122.579 106.904 1.00 38.07 P
ATOM 26 OP1 U B2022 39.974 121.743 108.039 1.00 39.88 O
ATOM 27 OP2 U B2022 41.602 122.209 106.132 1.00 38.51 O
ATOM 28 O5' U B2022 39.196 122.679 105.867 1.00 39.76 O
TER
Atoms:
OP1: (47.794,117.616,106.440)
OP2: (48.413,117.483,103.953)
C3': (45.436,121.809,106.609)
C1': (44.141,119.953,106.017)
C5': (47.513,120.433,106.088)
O4': (45.321,119.868,105.245)
C8: (43.934,117.662,107.171)
O2': (43.374,121.310,107.844)
C6: (41.429,115.990,105.322)
C5: (42.413,116.783,105.968)
C4: (42.623,118.045,105.458)
P: (48.529,118.162,105.269)
C4': (46.203,120.976,105.596)
C2': (44.526,120.762,107.250)
C2: (41.104,117.768,103.888)
N1: (40.789,116.530,104.260)
N3: (41.997,118.607,104.412)
N6: (41.093,114.750,105.703)
N7: (43.249,116.550,107.054)
N9: (43.607,118.608,106.233)
O5': (48.125,119.678,105.052)
O3': (44.642,122.724,105.864)
OP2: (48.413,117.483,103.953)
C3': (45.436,121.809,106.609)
C1': (44.141,119.953,106.017)
C5': (47.513,120.433,106.088)
O4': (45.321,119.868,105.245)
C8: (43.934,117.662,107.171)
O2': (43.374,121.310,107.844)
C6: (41.429,115.990,105.322)
C5: (42.413,116.783,105.968)
C4: (42.623,118.045,105.458)
P: (48.529,118.162,105.269)
C4': (46.203,120.976,105.596)
C2': (44.526,120.762,107.250)
C2: (41.104,117.768,103.888)
N1: (40.789,116.530,104.260)
N3: (41.997,118.607,104.412)
N6: (41.093,114.750,105.703)
N7: (43.249,116.550,107.054)
N9: (43.607,118.608,106.233)
O5': (48.125,119.678,105.052)
O3': (44.642,122.724,105.864)
OP1: (45.355,124.196,103.998)
OP2: (46.384,124.511,106.331)
C3': (41.139,125.077,106.623)
C1': (41.098,127.321,105.926)
C5': (43.612,125.223,107.268)
O6: (41.399,127.745,99.942)
O4': (42.288,127.122,106.664)
C8: (42.736,127.516,104.001)
C2: (38.735,127.269,102.253)
C6: (40.844,127.586,101.036)
C5: (41.431,127.532,102.319)
C4: (40.614,127.375,103.422)
P: (45.220,124.173,105.480)
C4': (42.240,125.841,107.340)
C2': (40.150,126.183,106.304)
O2': (39.404,126.569,107.441)
N1: (39.461,127.438,101.100)
N2: (37.408,127.121,102.104)
N3: (39.271,127.242,103.462)
N7: (42.763,127.609,102.698)
N9: (41.465,127.389,104.510)
O5': (44.040,125.149,105.898)
O3': (40.574,124.072,107.460)
OP2: (46.384,124.511,106.331)
C3': (41.139,125.077,106.623)
C1': (41.098,127.321,105.926)
C5': (43.612,125.223,107.268)
O6: (41.399,127.745,99.942)
O4': (42.288,127.122,106.664)
C8: (42.736,127.516,104.001)
C2: (38.735,127.269,102.253)
C6: (40.844,127.586,101.036)
C5: (41.431,127.532,102.319)
C4: (40.614,127.375,103.422)
P: (45.220,124.173,105.480)
C4': (42.240,125.841,107.340)
C2': (40.150,126.183,106.304)
O2': (39.404,126.569,107.441)
N1: (39.461,127.438,101.100)
N2: (37.408,127.121,102.104)
N3: (39.271,127.242,103.462)
N7: (42.763,127.609,102.698)
N9: (41.465,127.389,104.510)
O5': (44.040,125.149,105.898)
O3': (40.574,124.072,107.460)
Image (generated by PyMOL):