ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:02020:02021

Extra

PDB:
ATOM 1 O3' G A2019 49.864 117.557 105.613 1.00 37.67 O
ATOM 2 P A A2020 48.315 117.482 105.229 1.00 36.71 P
ATOM 3 OP1 A A2020 47.626 116.934 106.418 1.00 37.88 O
ATOM 4 OP2 A A2020 48.182 116.788 103.921 1.00 35.97 O
ATOM 5 O5' A A2020 47.885 118.994 105.027 1.00 36.73 O
ATOM 6 C5' A A2020 47.309 119.744 106.093 1.00 35.04 C
ATOM 7 C4' A A2020 45.996 120.324 105.645 1.00 37.34 C
ATOM 8 O4' A A2020 45.092 119.250 105.267 1.00 36.95 O
ATOM 9 C3' A A2020 45.256 121.135 106.696 1.00 38.37 C
ATOM 10 O3' A A2020 44.455 122.080 106.002 1.00 43.81 O
ATOM 11 C2' A A2020 44.337 120.091 107.317 1.00 36.84 C
ATOM 12 O2' A A2020 43.201 120.668 107.922 1.00 36.68 O
ATOM 13 C1' A A2020 43.931 119.313 106.070 1.00 36.04 C
ATOM 14 N9 A A2020 43.419 117.958 106.272 1.00 33.96 N
ATOM 15 C8 A A2020 43.789 116.995 107.176 1.00 30.86 C
ATOM 16 N7 A A2020 43.128 115.870 107.044 1.00 31.59 N
ATOM 17 C5 A A2020 42.258 116.113 105.987 1.00 31.74 C
ATOM 18 C6 A A2020 41.282 115.315 105.343 1.00 31.59 C
ATOM 19 N6 A A2020 40.991 114.055 105.694 1.00 24.26 N
ATOM 20 N1 A A2020 40.599 115.870 104.314 1.00 31.18 N
ATOM 21 C2 A A2020 40.865 117.128 103.975 1.00 33.08 C
ATOM 22 N3 A A2020 41.748 117.977 104.504 1.00 33.94 N
ATOM 23 C4 A A2020 42.421 117.398 105.512 1.00 33.11 C
ATOM 24 P G A2021 45.067 123.502 105.575 1.00 46.17 P
ATOM 25 OP1 G A2021 45.220 123.475 104.099 1.00 45.49 O
ATOM 26 OP2 G A2021 46.233 123.815 106.433 1.00 45.77 O
ATOM 27 O5' G A2021 43.901 124.518 105.950 1.00 43.38 O
TER

ATOM 1 O3' A B2020 44.455 122.080 106.002 1.00 43.81 O
ATOM 2 P G B2021 45.067 123.502 105.575 1.00 46.17 P
ATOM 3 OP1 G B2021 45.220 123.475 104.099 1.00 45.49 O
ATOM 4 OP2 G B2021 46.233 123.815 106.433 1.00 45.77 O
ATOM 5 O5' G B2021 43.901 124.518 105.950 1.00 43.38 O
ATOM 6 C5' G B2021 43.408 124.590 107.298 1.00 38.39 C
ATOM 7 C4' G B2021 42.021 125.181 107.312 1.00 38.32 C
ATOM 8 O4' G B2021 42.062 126.450 106.615 1.00 36.71 O
ATOM 9 C3' G B2021 40.944 124.391 106.584 1.00 37.43 C
ATOM 10 O3' G B2021 40.378 123.387 107.420 1.00 37.81 O
ATOM 11 C2' G B2021 39.941 125.479 106.244 1.00 37.28 C
ATOM 12 O2' G B2021 39.186 125.872 107.375 1.00 36.47 O
ATOM 13 C1' G B2021 40.877 126.626 105.870 1.00 36.19 C
ATOM 14 N9 G B2021 41.254 126.693 104.459 1.00 37.72 N
ATOM 15 C8 G B2021 42.527 126.838 103.964 1.00 36.46 C
ATOM 16 N7 G B2021 42.566 126.944 102.666 1.00 37.46 N
ATOM 17 C5 G B2021 41.240 126.850 102.275 1.00 39.29 C
ATOM 18 C6 G B2021 40.665 126.914 100.988 1.00 39.07 C
ATOM 19 O6 G B2021 41.227 127.112 99.906 1.00 40.74 O
ATOM 20 N1 G B2021 39.285 126.742 101.037 1.00 39.50 N
ATOM 21 C2 G B2021 38.552 126.559 102.184 1.00 37.20 C
ATOM 22 N2 G B2021 37.230 126.407 102.025 1.00 35.35 N
ATOM 23 N3 G B2021 39.078 126.525 103.395 1.00 37.35 N
ATOM 24 C4 G B2021 40.417 126.671 103.367 1.00 37.49 C
ATOM 25 P U B2022 40.242 121.885 106.880 1.00 37.26 P
ATOM 26 OP1 U B2022 39.850 121.035 108.020 1.00 40.16 O
ATOM 27 OP2 U B2022 41.469 121.561 106.124 1.00 42.19 O
ATOM 28 O5' U B2022 39.031 121.944 105.849 1.00 39.04 O
TER

Atoms:
OP1: (47.626,116.934,106.418)
OP2: (48.182,116.788,103.921)
C3': (45.256,121.135,106.696)
C1': (43.931,119.313,106.070)
C5': (47.309,119.744,106.093)
O4': (45.092,119.250,105.267)
C8: (43.789,116.995,107.176)
O2': (43.201,120.668,107.922)
C6: (41.282,115.315,105.343)
C5: (42.258,116.113,105.987)
C4: (42.421,117.398,105.512)
P: (48.315,117.482,105.229)
C4': (45.996,120.324,105.645)
C2': (44.337,120.091,107.317)
C2: (40.865,117.128,103.975)
N1: (40.599,115.870,104.314)
N3: (41.748,117.977,104.504)
N6: (40.991,114.055,105.694)
N7: (43.128,115.870,107.044)
N9: (43.419,117.958,106.272)
O5': (47.885,118.994,105.027)
O3': (44.455,122.080,106.002)
OP1: (45.220,123.475,104.099)
OP2: (46.233,123.815,106.433)
C3': (40.944,124.391,106.584)
C1': (40.877,126.626,105.870)
C5': (43.408,124.590,107.298)
O6: (41.227,127.112,99.906)
O4': (42.062,126.450,106.615)
C8: (42.527,126.838,103.964)
C2: (38.552,126.559,102.184)
C6: (40.665,126.914,100.988)
C5: (41.240,126.850,102.275)
C4: (40.417,126.671,103.367)
P: (45.067,123.502,105.575)
C4': (42.021,125.181,107.312)
C2': (39.941,125.479,106.244)
O2': (39.186,125.872,107.375)
N1: (39.285,126.742,101.037)
N2: (37.230,126.407,102.025)
N3: (39.078,126.525,103.395)
N7: (42.566,126.944,102.666)
N9: (41.254,126.693,104.459)
O5': (43.901,124.518,105.950)
O3': (40.378,123.387,107.420)
Image (generated by PyMOL):
PyMOL image
show in jmol