Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:02020:02021
Extra
PDB:
ATOM 1 O3' G A2019 49.911 118.019 105.673 1.00 29.87 O
ATOM 2 P A A2020 48.352 117.951 105.316 1.00 29.83 P
ATOM 3 OP1 A A2020 47.667 117.436 106.521 1.00 29.44 O
ATOM 4 OP2 A A2020 48.188 117.240 104.024 1.00 29.45 O
ATOM 5 O5' A A2020 47.951 119.469 105.073 1.00 30.47 O
ATOM 6 C5' A A2020 47.388 120.263 106.114 1.00 28.78 C
ATOM 7 C4' A A2020 46.058 120.810 105.668 1.00 31.19 C
ATOM 8 O4' A A2020 45.185 119.705 105.288 1.00 30.37 O
ATOM 9 C3' A A2020 45.300 121.592 106.731 1.00 31.37 C
ATOM 10 O3' A A2020 44.486 122.563 106.083 1.00 35.95 O
ATOM 11 C2' A A2020 44.395 120.519 107.326 1.00 30.21 C
ATOM 12 O2' A A2020 43.262 121.055 107.970 1.00 31.75 O
ATOM 13 C1' A A2020 44.006 119.758 106.061 1.00 27.69 C
ATOM 14 N9 A A2020 43.484 118.401 106.220 1.00 25.86 N
ATOM 15 C8 A A2020 43.841 117.415 107.104 1.00 24.75 C
ATOM 16 N7 A A2020 43.175 116.298 106.944 1.00 24.85 N
ATOM 17 C5 A A2020 42.314 116.571 105.889 1.00 23.60 C
ATOM 18 C6 A A2020 41.333 115.794 105.224 1.00 23.94 C
ATOM 19 N6 A A2020 41.020 114.535 105.550 1.00 20.23 N
ATOM 20 N1 A A2020 40.670 116.371 104.201 1.00 23.95 N
ATOM 21 C2 A A2020 40.953 117.636 103.887 1.00 24.37 C
ATOM 22 N3 A A2020 41.831 118.466 104.439 1.00 25.02 N
ATOM 23 C4 A A2020 42.491 117.863 105.441 1.00 24.10 C
ATOM 24 P G A2021 45.088 124.010 105.726 1.00 39.47 P
ATOM 25 OP1 G A2021 45.346 124.010 104.261 1.00 38.05 O
ATOM 26 OP2 G A2021 46.183 124.336 106.676 1.00 38.25 O
ATOM 27 O5' G A2021 43.885 125.006 106.025 1.00 35.70 O
TER
ATOM 1 O3' A B2020 44.486 122.563 106.083 1.00 35.95 O
ATOM 2 P G B2021 45.088 124.010 105.726 1.00 39.47 P
ATOM 3 OP1 G B2021 45.346 124.010 104.261 1.00 38.05 O
ATOM 4 OP2 G B2021 46.183 124.336 106.676 1.00 38.25 O
ATOM 5 O5' G B2021 43.885 125.006 106.025 1.00 35.70 O
ATOM 6 C5' G B2021 43.401 125.182 107.369 1.00 32.44 C
ATOM 7 C4' G B2021 41.994 125.719 107.346 1.00 30.82 C
ATOM 8 O4' G B2021 41.996 126.974 106.621 1.00 28.95 O
ATOM 9 C3' G B2021 40.970 124.861 106.618 1.00 28.94 C
ATOM 10 O3' G B2021 40.424 123.861 107.475 1.00 30.04 O
ATOM 11 C2' G B2021 39.933 125.895 106.212 1.00 29.06 C
ATOM 12 O2' G B2021 39.119 126.284 107.299 1.00 27.49 O
ATOM 13 C1' G B2021 40.829 127.076 105.839 1.00 27.83 C
ATOM 14 N9 G B2021 41.246 127.124 104.440 1.00 29.95 N
ATOM 15 C8 G B2021 42.536 127.223 103.977 1.00 29.36 C
ATOM 16 N7 G B2021 42.610 127.309 102.680 1.00 29.41 N
ATOM 17 C5 G B2021 41.291 127.250 102.255 1.00 31.25 C
ATOM 18 C6 G B2021 40.746 127.310 100.947 1.00 32.33 C
ATOM 19 O6 G B2021 41.344 127.461 99.869 1.00 32.04 O
ATOM 20 N1 G B2021 39.358 127.188 100.968 1.00 32.42 N
ATOM 21 C2 G B2021 38.594 127.044 102.103 1.00 32.47 C
ATOM 22 N2 G B2021 37.267 126.930 101.925 1.00 32.70 N
ATOM 23 N3 G B2021 39.093 127.010 103.326 1.00 29.73 N
ATOM 24 C4 G B2021 40.436 127.115 103.328 1.00 30.07 C
ATOM 25 P U B2022 40.237 122.359 106.933 1.00 30.56 P
ATOM 26 OP1 U B2022 39.765 121.539 108.064 1.00 32.31 O
ATOM 27 OP2 U B2022 41.478 121.974 106.222 1.00 32.26 O
ATOM 28 O5' U B2022 39.064 122.471 105.861 1.00 28.58 O
TER
ATOM 2 P A A2020 48.352 117.951 105.316 1.00 29.83 P
ATOM 3 OP1 A A2020 47.667 117.436 106.521 1.00 29.44 O
ATOM 4 OP2 A A2020 48.188 117.240 104.024 1.00 29.45 O
ATOM 5 O5' A A2020 47.951 119.469 105.073 1.00 30.47 O
ATOM 6 C5' A A2020 47.388 120.263 106.114 1.00 28.78 C
ATOM 7 C4' A A2020 46.058 120.810 105.668 1.00 31.19 C
ATOM 8 O4' A A2020 45.185 119.705 105.288 1.00 30.37 O
ATOM 9 C3' A A2020 45.300 121.592 106.731 1.00 31.37 C
ATOM 10 O3' A A2020 44.486 122.563 106.083 1.00 35.95 O
ATOM 11 C2' A A2020 44.395 120.519 107.326 1.00 30.21 C
ATOM 12 O2' A A2020 43.262 121.055 107.970 1.00 31.75 O
ATOM 13 C1' A A2020 44.006 119.758 106.061 1.00 27.69 C
ATOM 14 N9 A A2020 43.484 118.401 106.220 1.00 25.86 N
ATOM 15 C8 A A2020 43.841 117.415 107.104 1.00 24.75 C
ATOM 16 N7 A A2020 43.175 116.298 106.944 1.00 24.85 N
ATOM 17 C5 A A2020 42.314 116.571 105.889 1.00 23.60 C
ATOM 18 C6 A A2020 41.333 115.794 105.224 1.00 23.94 C
ATOM 19 N6 A A2020 41.020 114.535 105.550 1.00 20.23 N
ATOM 20 N1 A A2020 40.670 116.371 104.201 1.00 23.95 N
ATOM 21 C2 A A2020 40.953 117.636 103.887 1.00 24.37 C
ATOM 22 N3 A A2020 41.831 118.466 104.439 1.00 25.02 N
ATOM 23 C4 A A2020 42.491 117.863 105.441 1.00 24.10 C
ATOM 24 P G A2021 45.088 124.010 105.726 1.00 39.47 P
ATOM 25 OP1 G A2021 45.346 124.010 104.261 1.00 38.05 O
ATOM 26 OP2 G A2021 46.183 124.336 106.676 1.00 38.25 O
ATOM 27 O5' G A2021 43.885 125.006 106.025 1.00 35.70 O
TER
ATOM 1 O3' A B2020 44.486 122.563 106.083 1.00 35.95 O
ATOM 2 P G B2021 45.088 124.010 105.726 1.00 39.47 P
ATOM 3 OP1 G B2021 45.346 124.010 104.261 1.00 38.05 O
ATOM 4 OP2 G B2021 46.183 124.336 106.676 1.00 38.25 O
ATOM 5 O5' G B2021 43.885 125.006 106.025 1.00 35.70 O
ATOM 6 C5' G B2021 43.401 125.182 107.369 1.00 32.44 C
ATOM 7 C4' G B2021 41.994 125.719 107.346 1.00 30.82 C
ATOM 8 O4' G B2021 41.996 126.974 106.621 1.00 28.95 O
ATOM 9 C3' G B2021 40.970 124.861 106.618 1.00 28.94 C
ATOM 10 O3' G B2021 40.424 123.861 107.475 1.00 30.04 O
ATOM 11 C2' G B2021 39.933 125.895 106.212 1.00 29.06 C
ATOM 12 O2' G B2021 39.119 126.284 107.299 1.00 27.49 O
ATOM 13 C1' G B2021 40.829 127.076 105.839 1.00 27.83 C
ATOM 14 N9 G B2021 41.246 127.124 104.440 1.00 29.95 N
ATOM 15 C8 G B2021 42.536 127.223 103.977 1.00 29.36 C
ATOM 16 N7 G B2021 42.610 127.309 102.680 1.00 29.41 N
ATOM 17 C5 G B2021 41.291 127.250 102.255 1.00 31.25 C
ATOM 18 C6 G B2021 40.746 127.310 100.947 1.00 32.33 C
ATOM 19 O6 G B2021 41.344 127.461 99.869 1.00 32.04 O
ATOM 20 N1 G B2021 39.358 127.188 100.968 1.00 32.42 N
ATOM 21 C2 G B2021 38.594 127.044 102.103 1.00 32.47 C
ATOM 22 N2 G B2021 37.267 126.930 101.925 1.00 32.70 N
ATOM 23 N3 G B2021 39.093 127.010 103.326 1.00 29.73 N
ATOM 24 C4 G B2021 40.436 127.115 103.328 1.00 30.07 C
ATOM 25 P U B2022 40.237 122.359 106.933 1.00 30.56 P
ATOM 26 OP1 U B2022 39.765 121.539 108.064 1.00 32.31 O
ATOM 27 OP2 U B2022 41.478 121.974 106.222 1.00 32.26 O
ATOM 28 O5' U B2022 39.064 122.471 105.861 1.00 28.58 O
TER
Atoms:
OP1: (47.667,117.436,106.521)
OP2: (48.188,117.240,104.024)
C3': (45.300,121.592,106.731)
C1': (44.006,119.758,106.061)
C5': (47.388,120.263,106.114)
O4': (45.185,119.705,105.288)
C8: (43.841,117.415,107.104)
O2': (43.262,121.055,107.970)
C6: (41.333,115.794,105.224)
C5: (42.314,116.571,105.889)
C4: (42.491,117.863,105.441)
P: (48.352,117.951,105.316)
C4': (46.058,120.810,105.668)
C2': (44.395,120.519,107.326)
C2: (40.953,117.636,103.887)
N1: (40.670,116.371,104.201)
N3: (41.831,118.466,104.439)
N6: (41.020,114.535,105.550)
N7: (43.175,116.298,106.944)
N9: (43.484,118.401,106.220)
O5': (47.951,119.469,105.073)
O3': (44.486,122.563,106.083)
OP2: (48.188,117.240,104.024)
C3': (45.300,121.592,106.731)
C1': (44.006,119.758,106.061)
C5': (47.388,120.263,106.114)
O4': (45.185,119.705,105.288)
C8: (43.841,117.415,107.104)
O2': (43.262,121.055,107.970)
C6: (41.333,115.794,105.224)
C5: (42.314,116.571,105.889)
C4: (42.491,117.863,105.441)
P: (48.352,117.951,105.316)
C4': (46.058,120.810,105.668)
C2': (44.395,120.519,107.326)
C2: (40.953,117.636,103.887)
N1: (40.670,116.371,104.201)
N3: (41.831,118.466,104.439)
N6: (41.020,114.535,105.550)
N7: (43.175,116.298,106.944)
N9: (43.484,118.401,106.220)
O5': (47.951,119.469,105.073)
O3': (44.486,122.563,106.083)
OP1: (45.346,124.010,104.261)
OP2: (46.183,124.336,106.676)
C3': (40.970,124.861,106.618)
C1': (40.829,127.076,105.839)
C5': (43.401,125.182,107.369)
O6: (41.344,127.461,99.869)
O4': (41.996,126.974,106.621)
C8: (42.536,127.223,103.977)
C2: (38.594,127.044,102.103)
C6: (40.746,127.310,100.947)
C5: (41.291,127.250,102.255)
C4: (40.436,127.115,103.328)
P: (45.088,124.010,105.726)
C4': (41.994,125.719,107.346)
C2': (39.933,125.895,106.212)
O2': (39.119,126.284,107.299)
N1: (39.358,127.188,100.968)
N2: (37.267,126.930,101.925)
N3: (39.093,127.010,103.326)
N7: (42.610,127.309,102.680)
N9: (41.246,127.124,104.440)
O5': (43.885,125.006,106.025)
O3': (40.424,123.861,107.475)
OP2: (46.183,124.336,106.676)
C3': (40.970,124.861,106.618)
C1': (40.829,127.076,105.839)
C5': (43.401,125.182,107.369)
O6: (41.344,127.461,99.869)
O4': (41.996,126.974,106.621)
C8: (42.536,127.223,103.977)
C2: (38.594,127.044,102.103)
C6: (40.746,127.310,100.947)
C5: (41.291,127.250,102.255)
C4: (40.436,127.115,103.328)
P: (45.088,124.010,105.726)
C4': (41.994,125.719,107.346)
C2': (39.933,125.895,106.212)
O2': (39.119,126.284,107.299)
N1: (39.358,127.188,100.968)
N2: (37.267,126.930,101.925)
N3: (39.093,127.010,103.326)
N7: (42.610,127.309,102.680)
N9: (41.246,127.124,104.440)
O5': (43.885,125.006,106.025)
O3': (40.424,123.861,107.475)
Image (generated by PyMOL):