Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02020:02021
Extra
PDB:
ATOM 1 O3' G A2019 49.907 118.802 105.541 1.00 30.95 O
ATOM 2 P A A2020 48.347 118.781 105.199 1.00 32.07 P
ATOM 3 OP1 A A2020 47.666 118.273 106.421 1.00 30.75 O
ATOM 4 OP2 A A2020 48.135 118.084 103.905 1.00 33.33 O
ATOM 5 O5' A A2020 47.998 120.315 104.968 1.00 30.91 O
ATOM 6 C5' A A2020 47.351 121.092 105.983 1.00 30.79 C
ATOM 7 C4' A A2020 45.995 121.532 105.499 1.00 32.03 C
ATOM 8 O4' A A2020 45.202 120.352 105.168 1.00 32.65 O
ATOM 9 C3' A A2020 45.171 122.318 106.513 1.00 32.48 C
ATOM 10 O3' A A2020 44.334 123.236 105.818 1.00 36.53 O
ATOM 11 C2' A A2020 44.286 121.230 107.107 1.00 32.36 C
ATOM 12 O2' A A2020 43.094 121.715 107.678 1.00 34.90 O
ATOM 13 C1' A A2020 43.976 120.420 105.856 1.00 32.62 C
ATOM 14 N9 A A2020 43.459 119.071 106.062 1.00 32.15 N
ATOM 15 C8 A A2020 43.833 118.123 106.979 1.00 33.36 C
ATOM 16 N7 A A2020 43.152 117.008 106.891 1.00 33.67 N
ATOM 17 C5 A A2020 42.269 117.239 105.845 1.00 33.72 C
ATOM 18 C6 A A2020 41.274 116.440 105.240 1.00 34.84 C
ATOM 19 N6 A A2020 40.979 115.191 105.621 1.00 33.81 N
ATOM 20 N1 A A2020 40.584 116.975 104.211 1.00 34.73 N
ATOM 21 C2 A A2020 40.874 118.220 103.824 1.00 33.38 C
ATOM 22 N3 A A2020 41.777 119.064 104.309 1.00 34.04 N
ATOM 23 C4 A A2020 42.450 118.506 105.328 1.00 32.76 C
ATOM 24 P G A2021 44.913 124.659 105.342 1.00 40.63 P
ATOM 25 OP1 G A2021 44.970 124.618 103.848 1.00 37.95 O
ATOM 26 OP2 G A2021 46.137 124.987 106.121 1.00 37.91 O
ATOM 27 O5' G A2021 43.774 125.690 105.756 1.00 35.48 O
TER
ATOM 1 O3' A B2020 44.334 123.236 105.818 1.00 36.53 O
ATOM 2 P G B2021 44.913 124.659 105.342 1.00 40.63 P
ATOM 3 OP1 G B2021 44.970 124.618 103.848 1.00 37.95 O
ATOM 4 OP2 G B2021 46.137 124.987 106.121 1.00 37.91 O
ATOM 5 O5' G B2021 43.774 125.690 105.756 1.00 35.48 O
ATOM 6 C5' G B2021 43.362 125.829 107.125 1.00 32.83 C
ATOM 7 C4' G B2021 41.978 126.422 107.179 1.00 32.32 C
ATOM 8 O4' G B2021 41.992 127.692 106.479 1.00 32.64 O
ATOM 9 C3' G B2021 40.918 125.608 106.460 1.00 31.43 C
ATOM 10 O3' G B2021 40.370 124.635 107.326 1.00 31.31 O
ATOM 11 C2' G B2021 39.898 126.666 106.080 1.00 30.56 C
ATOM 12 O2' G B2021 39.101 127.037 107.188 1.00 29.28 O
ATOM 13 C1' G B2021 40.815 127.831 105.705 1.00 31.27 C
ATOM 14 N9 G B2021 41.219 127.886 104.300 1.00 32.79 N
ATOM 15 C8 G B2021 42.506 127.987 103.828 1.00 32.18 C
ATOM 16 N7 G B2021 42.575 128.064 102.529 1.00 31.12 N
ATOM 17 C5 G B2021 41.257 128.001 102.111 1.00 32.53 C
ATOM 18 C6 G B2021 40.715 128.043 100.808 1.00 33.70 C
ATOM 19 O6 G B2021 41.314 128.161 99.730 1.00 34.42 O
ATOM 20 N1 G B2021 39.329 127.934 100.830 1.00 35.05 N
ATOM 21 C2 G B2021 38.566 127.804 101.965 1.00 34.64 C
ATOM 22 N2 G B2021 37.244 127.697 101.780 1.00 35.77 N
ATOM 23 N3 G B2021 39.061 127.776 103.189 1.00 32.14 N
ATOM 24 C4 G B2021 40.404 127.877 103.189 1.00 32.22 C
ATOM 25 P U B2022 40.151 123.140 106.805 1.00 32.25 P
ATOM 26 OP1 U B2022 39.694 122.378 107.984 1.00 33.82 O
ATOM 27 OP2 U B2022 41.373 122.718 106.078 1.00 32.60 O
ATOM 28 O5' U B2022 38.955 123.237 105.757 1.00 31.90 O
TER
ATOM 2 P A A2020 48.347 118.781 105.199 1.00 32.07 P
ATOM 3 OP1 A A2020 47.666 118.273 106.421 1.00 30.75 O
ATOM 4 OP2 A A2020 48.135 118.084 103.905 1.00 33.33 O
ATOM 5 O5' A A2020 47.998 120.315 104.968 1.00 30.91 O
ATOM 6 C5' A A2020 47.351 121.092 105.983 1.00 30.79 C
ATOM 7 C4' A A2020 45.995 121.532 105.499 1.00 32.03 C
ATOM 8 O4' A A2020 45.202 120.352 105.168 1.00 32.65 O
ATOM 9 C3' A A2020 45.171 122.318 106.513 1.00 32.48 C
ATOM 10 O3' A A2020 44.334 123.236 105.818 1.00 36.53 O
ATOM 11 C2' A A2020 44.286 121.230 107.107 1.00 32.36 C
ATOM 12 O2' A A2020 43.094 121.715 107.678 1.00 34.90 O
ATOM 13 C1' A A2020 43.976 120.420 105.856 1.00 32.62 C
ATOM 14 N9 A A2020 43.459 119.071 106.062 1.00 32.15 N
ATOM 15 C8 A A2020 43.833 118.123 106.979 1.00 33.36 C
ATOM 16 N7 A A2020 43.152 117.008 106.891 1.00 33.67 N
ATOM 17 C5 A A2020 42.269 117.239 105.845 1.00 33.72 C
ATOM 18 C6 A A2020 41.274 116.440 105.240 1.00 34.84 C
ATOM 19 N6 A A2020 40.979 115.191 105.621 1.00 33.81 N
ATOM 20 N1 A A2020 40.584 116.975 104.211 1.00 34.73 N
ATOM 21 C2 A A2020 40.874 118.220 103.824 1.00 33.38 C
ATOM 22 N3 A A2020 41.777 119.064 104.309 1.00 34.04 N
ATOM 23 C4 A A2020 42.450 118.506 105.328 1.00 32.76 C
ATOM 24 P G A2021 44.913 124.659 105.342 1.00 40.63 P
ATOM 25 OP1 G A2021 44.970 124.618 103.848 1.00 37.95 O
ATOM 26 OP2 G A2021 46.137 124.987 106.121 1.00 37.91 O
ATOM 27 O5' G A2021 43.774 125.690 105.756 1.00 35.48 O
TER
ATOM 1 O3' A B2020 44.334 123.236 105.818 1.00 36.53 O
ATOM 2 P G B2021 44.913 124.659 105.342 1.00 40.63 P
ATOM 3 OP1 G B2021 44.970 124.618 103.848 1.00 37.95 O
ATOM 4 OP2 G B2021 46.137 124.987 106.121 1.00 37.91 O
ATOM 5 O5' G B2021 43.774 125.690 105.756 1.00 35.48 O
ATOM 6 C5' G B2021 43.362 125.829 107.125 1.00 32.83 C
ATOM 7 C4' G B2021 41.978 126.422 107.179 1.00 32.32 C
ATOM 8 O4' G B2021 41.992 127.692 106.479 1.00 32.64 O
ATOM 9 C3' G B2021 40.918 125.608 106.460 1.00 31.43 C
ATOM 10 O3' G B2021 40.370 124.635 107.326 1.00 31.31 O
ATOM 11 C2' G B2021 39.898 126.666 106.080 1.00 30.56 C
ATOM 12 O2' G B2021 39.101 127.037 107.188 1.00 29.28 O
ATOM 13 C1' G B2021 40.815 127.831 105.705 1.00 31.27 C
ATOM 14 N9 G B2021 41.219 127.886 104.300 1.00 32.79 N
ATOM 15 C8 G B2021 42.506 127.987 103.828 1.00 32.18 C
ATOM 16 N7 G B2021 42.575 128.064 102.529 1.00 31.12 N
ATOM 17 C5 G B2021 41.257 128.001 102.111 1.00 32.53 C
ATOM 18 C6 G B2021 40.715 128.043 100.808 1.00 33.70 C
ATOM 19 O6 G B2021 41.314 128.161 99.730 1.00 34.42 O
ATOM 20 N1 G B2021 39.329 127.934 100.830 1.00 35.05 N
ATOM 21 C2 G B2021 38.566 127.804 101.965 1.00 34.64 C
ATOM 22 N2 G B2021 37.244 127.697 101.780 1.00 35.77 N
ATOM 23 N3 G B2021 39.061 127.776 103.189 1.00 32.14 N
ATOM 24 C4 G B2021 40.404 127.877 103.189 1.00 32.22 C
ATOM 25 P U B2022 40.151 123.140 106.805 1.00 32.25 P
ATOM 26 OP1 U B2022 39.694 122.378 107.984 1.00 33.82 O
ATOM 27 OP2 U B2022 41.373 122.718 106.078 1.00 32.60 O
ATOM 28 O5' U B2022 38.955 123.237 105.757 1.00 31.90 O
TER
Atoms:
OP1: (47.666,118.273,106.421)
OP2: (48.135,118.084,103.905)
C3': (45.171,122.318,106.513)
C1': (43.976,120.420,105.856)
C5': (47.351,121.092,105.983)
O4': (45.202,120.352,105.168)
C8: (43.833,118.123,106.979)
O2': (43.094,121.715,107.678)
C6: (41.274,116.440,105.240)
C5: (42.269,117.239,105.845)
C4: (42.450,118.506,105.328)
P: (48.347,118.781,105.199)
C4': (45.995,121.532,105.499)
C2': (44.286,121.230,107.107)
C2: (40.874,118.220,103.824)
N1: (40.584,116.975,104.211)
N3: (41.777,119.064,104.309)
N6: (40.979,115.191,105.621)
N7: (43.152,117.008,106.891)
N9: (43.459,119.071,106.062)
O5': (47.998,120.315,104.968)
O3': (44.334,123.236,105.818)
OP2: (48.135,118.084,103.905)
C3': (45.171,122.318,106.513)
C1': (43.976,120.420,105.856)
C5': (47.351,121.092,105.983)
O4': (45.202,120.352,105.168)
C8: (43.833,118.123,106.979)
O2': (43.094,121.715,107.678)
C6: (41.274,116.440,105.240)
C5: (42.269,117.239,105.845)
C4: (42.450,118.506,105.328)
P: (48.347,118.781,105.199)
C4': (45.995,121.532,105.499)
C2': (44.286,121.230,107.107)
C2: (40.874,118.220,103.824)
N1: (40.584,116.975,104.211)
N3: (41.777,119.064,104.309)
N6: (40.979,115.191,105.621)
N7: (43.152,117.008,106.891)
N9: (43.459,119.071,106.062)
O5': (47.998,120.315,104.968)
O3': (44.334,123.236,105.818)
OP1: (44.970,124.618,103.848)
OP2: (46.137,124.987,106.121)
C3': (40.918,125.608,106.460)
C1': (40.815,127.831,105.705)
C5': (43.362,125.829,107.125)
O6: (41.314,128.161,99.730)
O4': (41.992,127.692,106.479)
C8: (42.506,127.987,103.828)
C2: (38.566,127.804,101.965)
C6: (40.715,128.043,100.808)
C5: (41.257,128.001,102.111)
C4: (40.404,127.877,103.189)
P: (44.913,124.659,105.342)
C4': (41.978,126.422,107.179)
C2': (39.898,126.666,106.080)
O2': (39.101,127.037,107.188)
N1: (39.329,127.934,100.830)
N2: (37.244,127.697,101.780)
N3: (39.061,127.776,103.189)
N7: (42.575,128.064,102.529)
N9: (41.219,127.886,104.300)
O5': (43.774,125.690,105.756)
O3': (40.370,124.635,107.326)
OP2: (46.137,124.987,106.121)
C3': (40.918,125.608,106.460)
C1': (40.815,127.831,105.705)
C5': (43.362,125.829,107.125)
O6: (41.314,128.161,99.730)
O4': (41.992,127.692,106.479)
C8: (42.506,127.987,103.828)
C2: (38.566,127.804,101.965)
C6: (40.715,128.043,100.808)
C5: (41.257,128.001,102.111)
C4: (40.404,127.877,103.189)
P: (44.913,124.659,105.342)
C4': (41.978,126.422,107.179)
C2': (39.898,126.666,106.080)
O2': (39.101,127.037,107.188)
N1: (39.329,127.934,100.830)
N2: (37.244,127.697,101.780)
N3: (39.061,127.776,103.189)
N7: (42.575,128.064,102.529)
N9: (41.219,127.886,104.300)
O5': (43.774,125.690,105.756)
O3': (40.370,124.635,107.326)
Image (generated by PyMOL):