Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:02020:02021
Extra
PDB:
ATOM 1 O3' G A2019 49.927 118.589 105.392 1.00 32.46 O
ATOM 2 P A A2020 48.354 118.535 105.101 1.00 31.48 P
ATOM 3 OP1 A A2020 47.725 118.008 106.344 1.00 29.25 O
ATOM 4 OP2 A A2020 48.122 117.844 103.816 1.00 30.70 O
ATOM 5 O5' A A2020 47.953 120.061 104.889 1.00 30.70 O
ATOM 6 C5' A A2020 47.261 120.805 105.905 1.00 31.25 C
ATOM 7 C4' A A2020 45.901 121.219 105.402 1.00 32.27 C
ATOM 8 O4' A A2020 45.114 120.027 105.119 1.00 32.41 O
ATOM 9 C3' A A2020 45.063 122.040 106.375 1.00 34.05 C
ATOM 10 O3' A A2020 44.234 122.924 105.619 1.00 36.32 O
ATOM 11 C2' A A2020 44.181 120.974 107.015 1.00 34.45 C
ATOM 12 O2' A A2020 42.999 121.490 107.591 1.00 36.66 O
ATOM 13 C1' A A2020 43.879 120.118 105.791 1.00 33.21 C
ATOM 14 N9 A A2020 43.338 118.773 105.993 1.00 32.15 N
ATOM 15 C8 A A2020 43.706 117.794 106.880 1.00 32.60 C
ATOM 16 N7 A A2020 43.002 116.694 106.776 1.00 31.98 N
ATOM 17 C5 A A2020 42.108 116.969 105.750 1.00 33.29 C
ATOM 18 C6 A A2020 41.080 116.205 105.141 1.00 33.50 C
ATOM 19 N6 A A2020 40.756 114.958 105.496 1.00 30.54 N
ATOM 20 N1 A A2020 40.385 116.783 104.139 1.00 34.63 N
ATOM 21 C2 A A2020 40.693 118.035 103.783 1.00 35.30 C
ATOM 22 N3 A A2020 41.624 118.849 104.276 1.00 34.59 N
ATOM 23 C4 A A2020 42.304 118.248 105.264 1.00 32.81 C
ATOM 24 P G A2021 44.767 124.389 105.222 1.00 38.92 P
ATOM 25 OP1 G A2021 44.914 124.409 103.737 1.00 37.08 O
ATOM 26 OP2 G A2021 45.924 124.754 106.082 1.00 39.42 O
ATOM 27 O5' G A2021 43.573 125.352 105.635 1.00 34.51 O
TER
ATOM 1 O3' A B2020 44.234 122.924 105.619 1.00 36.32 O
ATOM 2 P G B2021 44.767 124.389 105.222 1.00 38.92 P
ATOM 3 OP1 G B2021 44.914 124.409 103.737 1.00 37.08 O
ATOM 4 OP2 G B2021 45.924 124.754 106.082 1.00 39.42 O
ATOM 5 O5' G B2021 43.573 125.352 105.635 1.00 34.51 O
ATOM 6 C5' G B2021 43.259 125.581 107.019 1.00 32.05 C
ATOM 7 C4' G B2021 41.865 126.125 107.134 1.00 31.33 C
ATOM 8 O4' G B2021 41.803 127.414 106.481 1.00 31.48 O
ATOM 9 C3' G B2021 40.834 125.274 106.423 1.00 31.38 C
ATOM 10 O3' G B2021 40.338 124.279 107.296 1.00 31.71 O
ATOM 11 C2' G B2021 39.777 126.285 106.024 1.00 30.74 C
ATOM 12 O2' G B2021 38.956 126.613 107.120 1.00 29.88 O
ATOM 13 C1' G B2021 40.647 127.490 105.669 1.00 31.37 C
ATOM 14 N9 G B2021 41.099 127.561 104.281 1.00 33.36 N
ATOM 15 C8 G B2021 42.404 127.635 103.856 1.00 34.94 C
ATOM 16 N7 G B2021 42.520 127.736 102.563 1.00 35.94 N
ATOM 17 C5 G B2021 41.216 127.719 102.101 1.00 34.88 C
ATOM 18 C6 G B2021 40.721 127.804 100.784 1.00 36.54 C
ATOM 19 O6 G B2021 41.361 127.935 99.721 1.00 34.38 O
ATOM 20 N1 G B2021 39.329 127.730 100.762 1.00 37.60 N
ATOM 21 C2 G B2021 38.526 127.600 101.871 1.00 35.97 C
ATOM 22 N2 G B2021 37.211 127.537 101.650 1.00 36.79 N
ATOM 23 N3 G B2021 38.981 127.534 103.106 1.00 34.99 N
ATOM 24 C4 G B2021 40.325 127.597 103.148 1.00 34.25 C
ATOM 25 P U B2022 40.063 122.809 106.737 1.00 33.28 P
ATOM 26 OP1 U B2022 39.548 122.030 107.885 1.00 34.35 O
ATOM 27 OP2 U B2022 41.261 122.340 106.002 1.00 31.86 O
ATOM 28 O5' U B2022 38.890 123.005 105.683 1.00 31.94 O
TER
ATOM 2 P A A2020 48.354 118.535 105.101 1.00 31.48 P
ATOM 3 OP1 A A2020 47.725 118.008 106.344 1.00 29.25 O
ATOM 4 OP2 A A2020 48.122 117.844 103.816 1.00 30.70 O
ATOM 5 O5' A A2020 47.953 120.061 104.889 1.00 30.70 O
ATOM 6 C5' A A2020 47.261 120.805 105.905 1.00 31.25 C
ATOM 7 C4' A A2020 45.901 121.219 105.402 1.00 32.27 C
ATOM 8 O4' A A2020 45.114 120.027 105.119 1.00 32.41 O
ATOM 9 C3' A A2020 45.063 122.040 106.375 1.00 34.05 C
ATOM 10 O3' A A2020 44.234 122.924 105.619 1.00 36.32 O
ATOM 11 C2' A A2020 44.181 120.974 107.015 1.00 34.45 C
ATOM 12 O2' A A2020 42.999 121.490 107.591 1.00 36.66 O
ATOM 13 C1' A A2020 43.879 120.118 105.791 1.00 33.21 C
ATOM 14 N9 A A2020 43.338 118.773 105.993 1.00 32.15 N
ATOM 15 C8 A A2020 43.706 117.794 106.880 1.00 32.60 C
ATOM 16 N7 A A2020 43.002 116.694 106.776 1.00 31.98 N
ATOM 17 C5 A A2020 42.108 116.969 105.750 1.00 33.29 C
ATOM 18 C6 A A2020 41.080 116.205 105.141 1.00 33.50 C
ATOM 19 N6 A A2020 40.756 114.958 105.496 1.00 30.54 N
ATOM 20 N1 A A2020 40.385 116.783 104.139 1.00 34.63 N
ATOM 21 C2 A A2020 40.693 118.035 103.783 1.00 35.30 C
ATOM 22 N3 A A2020 41.624 118.849 104.276 1.00 34.59 N
ATOM 23 C4 A A2020 42.304 118.248 105.264 1.00 32.81 C
ATOM 24 P G A2021 44.767 124.389 105.222 1.00 38.92 P
ATOM 25 OP1 G A2021 44.914 124.409 103.737 1.00 37.08 O
ATOM 26 OP2 G A2021 45.924 124.754 106.082 1.00 39.42 O
ATOM 27 O5' G A2021 43.573 125.352 105.635 1.00 34.51 O
TER
ATOM 1 O3' A B2020 44.234 122.924 105.619 1.00 36.32 O
ATOM 2 P G B2021 44.767 124.389 105.222 1.00 38.92 P
ATOM 3 OP1 G B2021 44.914 124.409 103.737 1.00 37.08 O
ATOM 4 OP2 G B2021 45.924 124.754 106.082 1.00 39.42 O
ATOM 5 O5' G B2021 43.573 125.352 105.635 1.00 34.51 O
ATOM 6 C5' G B2021 43.259 125.581 107.019 1.00 32.05 C
ATOM 7 C4' G B2021 41.865 126.125 107.134 1.00 31.33 C
ATOM 8 O4' G B2021 41.803 127.414 106.481 1.00 31.48 O
ATOM 9 C3' G B2021 40.834 125.274 106.423 1.00 31.38 C
ATOM 10 O3' G B2021 40.338 124.279 107.296 1.00 31.71 O
ATOM 11 C2' G B2021 39.777 126.285 106.024 1.00 30.74 C
ATOM 12 O2' G B2021 38.956 126.613 107.120 1.00 29.88 O
ATOM 13 C1' G B2021 40.647 127.490 105.669 1.00 31.37 C
ATOM 14 N9 G B2021 41.099 127.561 104.281 1.00 33.36 N
ATOM 15 C8 G B2021 42.404 127.635 103.856 1.00 34.94 C
ATOM 16 N7 G B2021 42.520 127.736 102.563 1.00 35.94 N
ATOM 17 C5 G B2021 41.216 127.719 102.101 1.00 34.88 C
ATOM 18 C6 G B2021 40.721 127.804 100.784 1.00 36.54 C
ATOM 19 O6 G B2021 41.361 127.935 99.721 1.00 34.38 O
ATOM 20 N1 G B2021 39.329 127.730 100.762 1.00 37.60 N
ATOM 21 C2 G B2021 38.526 127.600 101.871 1.00 35.97 C
ATOM 22 N2 G B2021 37.211 127.537 101.650 1.00 36.79 N
ATOM 23 N3 G B2021 38.981 127.534 103.106 1.00 34.99 N
ATOM 24 C4 G B2021 40.325 127.597 103.148 1.00 34.25 C
ATOM 25 P U B2022 40.063 122.809 106.737 1.00 33.28 P
ATOM 26 OP1 U B2022 39.548 122.030 107.885 1.00 34.35 O
ATOM 27 OP2 U B2022 41.261 122.340 106.002 1.00 31.86 O
ATOM 28 O5' U B2022 38.890 123.005 105.683 1.00 31.94 O
TER
Atoms:
OP1: (47.725,118.008,106.344)
OP2: (48.122,117.844,103.816)
C3': (45.063,122.040,106.375)
C1': (43.879,120.118,105.791)
C5': (47.261,120.805,105.905)
O4': (45.114,120.027,105.119)
C8: (43.706,117.794,106.880)
O2': (42.999,121.490,107.591)
C6: (41.080,116.205,105.141)
C5: (42.108,116.969,105.750)
C4: (42.304,118.248,105.264)
P: (48.354,118.535,105.101)
C4': (45.901,121.219,105.402)
C2': (44.181,120.974,107.015)
C2: (40.693,118.035,103.783)
N1: (40.385,116.783,104.139)
N3: (41.624,118.849,104.276)
N6: (40.756,114.958,105.496)
N7: (43.002,116.694,106.776)
N9: (43.338,118.773,105.993)
O5': (47.953,120.061,104.889)
O3': (44.234,122.924,105.619)
OP2: (48.122,117.844,103.816)
C3': (45.063,122.040,106.375)
C1': (43.879,120.118,105.791)
C5': (47.261,120.805,105.905)
O4': (45.114,120.027,105.119)
C8: (43.706,117.794,106.880)
O2': (42.999,121.490,107.591)
C6: (41.080,116.205,105.141)
C5: (42.108,116.969,105.750)
C4: (42.304,118.248,105.264)
P: (48.354,118.535,105.101)
C4': (45.901,121.219,105.402)
C2': (44.181,120.974,107.015)
C2: (40.693,118.035,103.783)
N1: (40.385,116.783,104.139)
N3: (41.624,118.849,104.276)
N6: (40.756,114.958,105.496)
N7: (43.002,116.694,106.776)
N9: (43.338,118.773,105.993)
O5': (47.953,120.061,104.889)
O3': (44.234,122.924,105.619)
OP1: (44.914,124.409,103.737)
OP2: (45.924,124.754,106.082)
C3': (40.834,125.274,106.423)
C1': (40.647,127.490,105.669)
C5': (43.259,125.581,107.019)
O6: (41.361,127.935,99.721)
O4': (41.803,127.414,106.481)
C8: (42.404,127.635,103.856)
C2: (38.526,127.600,101.871)
C6: (40.721,127.804,100.784)
C5: (41.216,127.719,102.101)
C4: (40.325,127.597,103.148)
P: (44.767,124.389,105.222)
C4': (41.865,126.125,107.134)
C2': (39.777,126.285,106.024)
O2': (38.956,126.613,107.120)
N1: (39.329,127.730,100.762)
N2: (37.211,127.537,101.650)
N3: (38.981,127.534,103.106)
N7: (42.520,127.736,102.563)
N9: (41.099,127.561,104.281)
O5': (43.573,125.352,105.635)
O3': (40.338,124.279,107.296)
OP2: (45.924,124.754,106.082)
C3': (40.834,125.274,106.423)
C1': (40.647,127.490,105.669)
C5': (43.259,125.581,107.019)
O6: (41.361,127.935,99.721)
O4': (41.803,127.414,106.481)
C8: (42.404,127.635,103.856)
C2: (38.526,127.600,101.871)
C6: (40.721,127.804,100.784)
C5: (41.216,127.719,102.101)
C4: (40.325,127.597,103.148)
P: (44.767,124.389,105.222)
C4': (41.865,126.125,107.134)
C2': (39.777,126.285,106.024)
O2': (38.956,126.613,107.120)
N1: (39.329,127.730,100.762)
N2: (37.211,127.537,101.650)
N3: (38.981,127.534,103.106)
N7: (42.520,127.736,102.563)
N9: (41.099,127.561,104.281)
O5': (43.573,125.352,105.635)
O3': (40.338,124.279,107.296)
Image (generated by PyMOL):