Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2OTJ:02020:02021
Extra
PDB:
ATOM 1 O3' G A2019 49.767 118.168 105.219 1.00 40.01 O
ATOM 2 P A A2020 48.191 118.076 104.954 1.00 38.41 P
ATOM 3 OP1 A A2020 47.588 117.635 106.236 1.00 37.69 O
ATOM 4 OP2 A A2020 47.957 117.292 103.722 1.00 39.08 O
ATOM 5 O5' A A2020 47.753 119.570 104.656 1.00 38.52 O
ATOM 6 C5' A A2020 47.190 120.384 105.680 1.00 37.92 C
ATOM 7 C4' A A2020 45.854 120.893 105.235 1.00 38.64 C
ATOM 8 O4' A A2020 45.014 119.764 104.884 1.00 37.65 O
ATOM 9 C3' A A2020 45.083 121.681 106.278 1.00 39.74 C
ATOM 10 O3' A A2020 44.258 122.620 105.600 1.00 42.08 O
ATOM 11 C2' A A2020 44.203 120.605 106.895 1.00 38.56 C
ATOM 12 O2' A A2020 43.044 121.132 107.494 1.00 39.92 O
ATOM 13 C1' A A2020 43.839 119.806 105.652 1.00 37.23 C
ATOM 14 N9 A A2020 43.373 118.441 105.860 1.00 36.31 N
ATOM 15 C8 A A2020 43.789 117.499 106.761 1.00 36.34 C
ATOM 16 N7 A A2020 43.165 116.353 106.651 1.00 35.39 N
ATOM 17 C5 A A2020 42.275 116.559 105.607 1.00 36.14 C
ATOM 18 C6 A A2020 41.325 115.721 104.981 1.00 36.32 C
ATOM 19 N6 A A2020 41.099 114.453 105.335 1.00 35.91 N
ATOM 20 N1 A A2020 40.606 116.242 103.964 1.00 35.61 N
ATOM 21 C2 A A2020 40.824 117.513 103.612 1.00 35.43 C
ATOM 22 N3 A A2020 41.680 118.394 104.120 1.00 35.76 N
ATOM 23 C4 A A2020 42.386 117.845 105.122 1.00 35.89 C
ATOM 24 P G A2021 44.864 124.031 105.123 1.00 45.21 P
ATOM 25 OP1 G A2021 44.963 123.980 103.631 1.00 44.57 O
ATOM 26 OP2 G A2021 46.062 124.370 105.932 1.00 44.76 O
ATOM 27 O5' G A2021 43.727 125.070 105.515 1.00 44.07 O
TER
ATOM 1 O3' A B2020 44.258 122.620 105.600 1.00 42.08 O
ATOM 2 P G B2021 44.864 124.031 105.123 1.00 45.21 P
ATOM 3 OP1 G B2021 44.963 123.980 103.631 1.00 44.57 O
ATOM 4 OP2 G B2021 46.062 124.370 105.932 1.00 44.76 O
ATOM 5 O5' G B2021 43.727 125.070 105.515 1.00 44.07 O
ATOM 6 C5' G B2021 43.305 125.215 106.879 1.00 42.20 C
ATOM 7 C4' G B2021 41.897 125.745 106.922 1.00 41.07 C
ATOM 8 O4' G B2021 41.869 126.995 106.203 1.00 40.86 O
ATOM 9 C3' G B2021 40.853 124.889 106.229 1.00 40.72 C
ATOM 10 O3' G B2021 40.328 123.911 107.106 1.00 40.11 O
ATOM 11 C2' G B2021 39.799 125.910 105.849 1.00 40.73 C
ATOM 12 O2' G B2021 39.004 126.276 106.952 1.00 40.66 O
ATOM 13 C1' G B2021 40.673 127.099 105.465 1.00 40.26 C
ATOM 14 N9 G B2021 41.047 127.164 104.059 1.00 40.35 N
ATOM 15 C8 G B2021 42.324 127.288 103.572 1.00 39.90 C
ATOM 16 N7 G B2021 42.367 127.401 102.276 1.00 40.28 N
ATOM 17 C5 G B2021 41.039 127.335 101.880 1.00 41.11 C
ATOM 18 C6 G B2021 40.468 127.422 100.591 1.00 42.47 C
ATOM 19 O6 G B2021 41.041 127.621 99.505 1.00 42.98 O
ATOM 20 N1 G B2021 39.086 127.267 100.635 1.00 43.07 N
ATOM 21 C2 G B2021 38.351 127.067 101.777 1.00 42.94 C
ATOM 22 N2 G B2021 37.026 126.906 101.612 1.00 43.57 N
ATOM 23 N3 G B2021 38.873 127.019 102.990 1.00 41.88 N
ATOM 24 C4 G B2021 40.213 127.157 102.966 1.00 40.76 C
ATOM 25 P U B2022 40.098 122.420 106.578 1.00 40.78 P
ATOM 26 OP1 U B2022 39.600 121.633 107.732 1.00 40.77 O
ATOM 27 OP2 U B2022 41.312 121.979 105.862 1.00 39.95 O
ATOM 28 O5' U B2022 38.931 122.557 105.506 1.00 41.31 O
TER
ATOM 2 P A A2020 48.191 118.076 104.954 1.00 38.41 P
ATOM 3 OP1 A A2020 47.588 117.635 106.236 1.00 37.69 O
ATOM 4 OP2 A A2020 47.957 117.292 103.722 1.00 39.08 O
ATOM 5 O5' A A2020 47.753 119.570 104.656 1.00 38.52 O
ATOM 6 C5' A A2020 47.190 120.384 105.680 1.00 37.92 C
ATOM 7 C4' A A2020 45.854 120.893 105.235 1.00 38.64 C
ATOM 8 O4' A A2020 45.014 119.764 104.884 1.00 37.65 O
ATOM 9 C3' A A2020 45.083 121.681 106.278 1.00 39.74 C
ATOM 10 O3' A A2020 44.258 122.620 105.600 1.00 42.08 O
ATOM 11 C2' A A2020 44.203 120.605 106.895 1.00 38.56 C
ATOM 12 O2' A A2020 43.044 121.132 107.494 1.00 39.92 O
ATOM 13 C1' A A2020 43.839 119.806 105.652 1.00 37.23 C
ATOM 14 N9 A A2020 43.373 118.441 105.860 1.00 36.31 N
ATOM 15 C8 A A2020 43.789 117.499 106.761 1.00 36.34 C
ATOM 16 N7 A A2020 43.165 116.353 106.651 1.00 35.39 N
ATOM 17 C5 A A2020 42.275 116.559 105.607 1.00 36.14 C
ATOM 18 C6 A A2020 41.325 115.721 104.981 1.00 36.32 C
ATOM 19 N6 A A2020 41.099 114.453 105.335 1.00 35.91 N
ATOM 20 N1 A A2020 40.606 116.242 103.964 1.00 35.61 N
ATOM 21 C2 A A2020 40.824 117.513 103.612 1.00 35.43 C
ATOM 22 N3 A A2020 41.680 118.394 104.120 1.00 35.76 N
ATOM 23 C4 A A2020 42.386 117.845 105.122 1.00 35.89 C
ATOM 24 P G A2021 44.864 124.031 105.123 1.00 45.21 P
ATOM 25 OP1 G A2021 44.963 123.980 103.631 1.00 44.57 O
ATOM 26 OP2 G A2021 46.062 124.370 105.932 1.00 44.76 O
ATOM 27 O5' G A2021 43.727 125.070 105.515 1.00 44.07 O
TER
ATOM 1 O3' A B2020 44.258 122.620 105.600 1.00 42.08 O
ATOM 2 P G B2021 44.864 124.031 105.123 1.00 45.21 P
ATOM 3 OP1 G B2021 44.963 123.980 103.631 1.00 44.57 O
ATOM 4 OP2 G B2021 46.062 124.370 105.932 1.00 44.76 O
ATOM 5 O5' G B2021 43.727 125.070 105.515 1.00 44.07 O
ATOM 6 C5' G B2021 43.305 125.215 106.879 1.00 42.20 C
ATOM 7 C4' G B2021 41.897 125.745 106.922 1.00 41.07 C
ATOM 8 O4' G B2021 41.869 126.995 106.203 1.00 40.86 O
ATOM 9 C3' G B2021 40.853 124.889 106.229 1.00 40.72 C
ATOM 10 O3' G B2021 40.328 123.911 107.106 1.00 40.11 O
ATOM 11 C2' G B2021 39.799 125.910 105.849 1.00 40.73 C
ATOM 12 O2' G B2021 39.004 126.276 106.952 1.00 40.66 O
ATOM 13 C1' G B2021 40.673 127.099 105.465 1.00 40.26 C
ATOM 14 N9 G B2021 41.047 127.164 104.059 1.00 40.35 N
ATOM 15 C8 G B2021 42.324 127.288 103.572 1.00 39.90 C
ATOM 16 N7 G B2021 42.367 127.401 102.276 1.00 40.28 N
ATOM 17 C5 G B2021 41.039 127.335 101.880 1.00 41.11 C
ATOM 18 C6 G B2021 40.468 127.422 100.591 1.00 42.47 C
ATOM 19 O6 G B2021 41.041 127.621 99.505 1.00 42.98 O
ATOM 20 N1 G B2021 39.086 127.267 100.635 1.00 43.07 N
ATOM 21 C2 G B2021 38.351 127.067 101.777 1.00 42.94 C
ATOM 22 N2 G B2021 37.026 126.906 101.612 1.00 43.57 N
ATOM 23 N3 G B2021 38.873 127.019 102.990 1.00 41.88 N
ATOM 24 C4 G B2021 40.213 127.157 102.966 1.00 40.76 C
ATOM 25 P U B2022 40.098 122.420 106.578 1.00 40.78 P
ATOM 26 OP1 U B2022 39.600 121.633 107.732 1.00 40.77 O
ATOM 27 OP2 U B2022 41.312 121.979 105.862 1.00 39.95 O
ATOM 28 O5' U B2022 38.931 122.557 105.506 1.00 41.31 O
TER
Atoms:
OP1: (47.588,117.635,106.236)
OP2: (47.957,117.292,103.722)
C3': (45.083,121.681,106.278)
C1': (43.839,119.806,105.652)
C5': (47.190,120.384,105.680)
O4': (45.014,119.764,104.884)
C8: (43.789,117.499,106.761)
O2': (43.044,121.132,107.494)
C6: (41.325,115.721,104.981)
C5: (42.275,116.559,105.607)
C4: (42.386,117.845,105.122)
P: (48.191,118.076,104.954)
C4': (45.854,120.893,105.235)
C2': (44.203,120.605,106.895)
C2: (40.824,117.513,103.612)
N1: (40.606,116.242,103.964)
N3: (41.680,118.394,104.120)
N6: (41.099,114.453,105.335)
N7: (43.165,116.353,106.651)
N9: (43.373,118.441,105.860)
O5': (47.753,119.570,104.656)
O3': (44.258,122.620,105.600)
OP2: (47.957,117.292,103.722)
C3': (45.083,121.681,106.278)
C1': (43.839,119.806,105.652)
C5': (47.190,120.384,105.680)
O4': (45.014,119.764,104.884)
C8: (43.789,117.499,106.761)
O2': (43.044,121.132,107.494)
C6: (41.325,115.721,104.981)
C5: (42.275,116.559,105.607)
C4: (42.386,117.845,105.122)
P: (48.191,118.076,104.954)
C4': (45.854,120.893,105.235)
C2': (44.203,120.605,106.895)
C2: (40.824,117.513,103.612)
N1: (40.606,116.242,103.964)
N3: (41.680,118.394,104.120)
N6: (41.099,114.453,105.335)
N7: (43.165,116.353,106.651)
N9: (43.373,118.441,105.860)
O5': (47.753,119.570,104.656)
O3': (44.258,122.620,105.600)
OP1: (44.963,123.980,103.631)
OP2: (46.062,124.370,105.932)
C3': (40.853,124.889,106.229)
C1': (40.673,127.099,105.465)
C5': (43.305,125.215,106.879)
O6: (41.041,127.621,99.505)
O4': (41.869,126.995,106.203)
C8: (42.324,127.288,103.572)
C2: (38.351,127.067,101.777)
C6: (40.468,127.422,100.591)
C5: (41.039,127.335,101.880)
C4: (40.213,127.157,102.966)
P: (44.864,124.031,105.123)
C4': (41.897,125.745,106.922)
C2': (39.799,125.910,105.849)
O2': (39.004,126.276,106.952)
N1: (39.086,127.267,100.635)
N2: (37.026,126.906,101.612)
N3: (38.873,127.019,102.990)
N7: (42.367,127.401,102.276)
N9: (41.047,127.164,104.059)
O5': (43.727,125.070,105.515)
O3': (40.328,123.911,107.106)
OP2: (46.062,124.370,105.932)
C3': (40.853,124.889,106.229)
C1': (40.673,127.099,105.465)
C5': (43.305,125.215,106.879)
O6: (41.041,127.621,99.505)
O4': (41.869,126.995,106.203)
C8: (42.324,127.288,103.572)
C2: (38.351,127.067,101.777)
C6: (40.468,127.422,100.591)
C5: (41.039,127.335,101.880)
C4: (40.213,127.157,102.966)
P: (44.864,124.031,105.123)
C4': (41.897,125.745,106.922)
C2': (39.799,125.910,105.849)
O2': (39.004,126.276,106.952)
N1: (39.086,127.267,100.635)
N2: (37.026,126.906,101.612)
N3: (38.873,127.019,102.990)
N7: (42.367,127.401,102.276)
N9: (41.047,127.164,104.059)
O5': (43.727,125.070,105.515)
O3': (40.328,123.911,107.106)
Image (generated by PyMOL):