Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Q9A:A9:A7
Extra
PDB:
ATOM 1 O3' G A 8 0.428 -42.866 -12.877 0.47 17.69 O
ATOM 2 P U A 9 -0.654 -43.688 -13.705 1.00 18.63 P
ATOM 3 OP1 U A 9 -1.845 -43.941 -12.856 1.00 20.70 O
ATOM 4 OP2 U A 9 0.024 -44.830 -14.377 1.00 18.68 O
ATOM 5 O5' U A 9 -1.025 -42.672 -14.873 1.00 18.47 O
ATOM 6 C5' U A 9 -1.751 -41.453 -14.588 1.00 18.76 C
ATOM 7 C4' U A 9 -1.367 -40.421 -15.632 1.00 18.35 C
ATOM 8 O4' U A 9 -0.033 -39.952 -15.288 1.00 19.36 O
ATOM 9 C3' U A 9 -1.210 -40.970 -17.048 1.00 19.22 C
ATOM 10 O3' U A 9 -2.456 -40.917 -17.735 1.00 19.98 O
ATOM 11 C2' U A 9 -0.206 -40.003 -17.652 1.00 18.06 C
ATOM 12 O2' U A 9 -0.816 -38.793 -18.074 1.00 19.81 O
ATOM 13 C1' U A 9 0.719 -39.765 -16.472 1.00 17.87 C
ATOM 14 N1 U A 9 1.942 -40.556 -16.357 1.00 16.56 N
ATOM 15 C2 U A 9 2.846 -40.460 -17.399 1.00 15.98 C
ATOM 16 O2 U A 9 2.637 -39.734 -18.370 1.00 17.55 O
ATOM 17 N3 U A 9 3.974 -41.221 -17.239 1.00 16.71 N
ATOM 18 C4 U A 9 4.302 -42.047 -16.176 1.00 16.41 C
ATOM 19 O4 U A 9 5.365 -42.670 -16.202 1.00 16.51 O
ATOM 20 C5 U A 9 3.322 -42.091 -15.132 1.00 16.50 C
ATOM 21 C6 U A 9 2.199 -41.365 -15.272 1.00 16.72 C
ATOM 22 P A A 10 -2.860 -42.069 -18.770 1.00 20.27 P
ATOM 23 OP1 A A 10 -4.207 -41.715 -19.273 1.00 24.87 O
ATOM 24 OP2 A A 10 -2.612 -43.347 -18.045 1.00 20.77 O
ATOM 25 O5' A A 10 -1.801 -42.015 -19.960 1.00 18.21 O
TER
ATOM 1 O3' U B 6 1.818 -33.712 -15.369 1.00 13.36 O
ATOM 2 C5' A B 7 0.478 -36.942 -13.698 1.00 15.63 C
ATOM 3 C4' A B 7 1.367 -37.944 -13.004 1.00 14.77 C
ATOM 4 O4' A B 7 2.248 -38.608 -13.951 1.00 14.43 O
ATOM 5 C3' A B 7 2.277 -37.411 -11.900 1.00 15.71 C
ATOM 6 C2' A B 7 3.615 -37.269 -12.640 1.00 13.97 C
ATOM 7 O2' A B 7 4.759 -37.282 -11.815 1.00 15.58 O
ATOM 8 C1' A B 7 3.582 -38.530 -13.532 1.00 14.54 C
ATOM 9 N9 A B 7 4.403 -38.377 -14.734 1.00 13.46 N
ATOM 10 C8 A B 7 4.140 -37.537 -15.796 1.00 13.20 C
ATOM 11 N7 A B 7 5.045 -37.599 -16.748 1.00 13.99 N
ATOM 12 C5 A B 7 5.958 -38.541 -16.282 1.00 13.13 C
ATOM 13 C6 A B 7 7.147 -39.044 -16.836 1.00 14.46 C
ATOM 14 N6 A B 7 7.644 -38.663 -18.018 1.00 15.40 N
ATOM 15 N1 A B 7 7.805 -39.961 -16.107 1.00 15.60 N
ATOM 16 C2 A B 7 7.325 -40.349 -14.918 1.00 15.38 C
ATOM 17 N3 A B 7 6.218 -39.937 -14.300 1.00 14.57 N
ATOM 18 C4 A B 7 5.571 -39.023 -15.045 1.00 13.80 C
ATOM 19 P A B 7 0.830 -34.423 -14.349 0.33 13.81 P
ATOM 20 OP1 A B 7 -0.536 -34.325 -14.920 0.33 16.90 O
ATOM 21 OP2 A B 7 1.086 -33.946 -12.963 0.33 15.39 O
ATOM 22 O5' A B 7 1.274 -35.958 -14.390 0.33 14.35 O
ATOM 23 O3' A B 7 2.398 -38.527 -10.987 0.47 19.57 O
ATOM 24 P G B 8 1.649 -38.684 -9.561 0.47 18.63 P
ATOM 25 OP1 G B 8 0.202 -38.476 -9.816 0.47 21.95 O
ATOM 26 OP2 G B 8 2.299 -37.937 -8.449 0.47 29.36 O
ATOM 27 O5' G B 8 1.865 -40.237 -9.261 0.47 19.08 O
TER
ATOM 2 P U A 9 -0.654 -43.688 -13.705 1.00 18.63 P
ATOM 3 OP1 U A 9 -1.845 -43.941 -12.856 1.00 20.70 O
ATOM 4 OP2 U A 9 0.024 -44.830 -14.377 1.00 18.68 O
ATOM 5 O5' U A 9 -1.025 -42.672 -14.873 1.00 18.47 O
ATOM 6 C5' U A 9 -1.751 -41.453 -14.588 1.00 18.76 C
ATOM 7 C4' U A 9 -1.367 -40.421 -15.632 1.00 18.35 C
ATOM 8 O4' U A 9 -0.033 -39.952 -15.288 1.00 19.36 O
ATOM 9 C3' U A 9 -1.210 -40.970 -17.048 1.00 19.22 C
ATOM 10 O3' U A 9 -2.456 -40.917 -17.735 1.00 19.98 O
ATOM 11 C2' U A 9 -0.206 -40.003 -17.652 1.00 18.06 C
ATOM 12 O2' U A 9 -0.816 -38.793 -18.074 1.00 19.81 O
ATOM 13 C1' U A 9 0.719 -39.765 -16.472 1.00 17.87 C
ATOM 14 N1 U A 9 1.942 -40.556 -16.357 1.00 16.56 N
ATOM 15 C2 U A 9 2.846 -40.460 -17.399 1.00 15.98 C
ATOM 16 O2 U A 9 2.637 -39.734 -18.370 1.00 17.55 O
ATOM 17 N3 U A 9 3.974 -41.221 -17.239 1.00 16.71 N
ATOM 18 C4 U A 9 4.302 -42.047 -16.176 1.00 16.41 C
ATOM 19 O4 U A 9 5.365 -42.670 -16.202 1.00 16.51 O
ATOM 20 C5 U A 9 3.322 -42.091 -15.132 1.00 16.50 C
ATOM 21 C6 U A 9 2.199 -41.365 -15.272 1.00 16.72 C
ATOM 22 P A A 10 -2.860 -42.069 -18.770 1.00 20.27 P
ATOM 23 OP1 A A 10 -4.207 -41.715 -19.273 1.00 24.87 O
ATOM 24 OP2 A A 10 -2.612 -43.347 -18.045 1.00 20.77 O
ATOM 25 O5' A A 10 -1.801 -42.015 -19.960 1.00 18.21 O
TER
ATOM 1 O3' U B 6 1.818 -33.712 -15.369 1.00 13.36 O
ATOM 2 C5' A B 7 0.478 -36.942 -13.698 1.00 15.63 C
ATOM 3 C4' A B 7 1.367 -37.944 -13.004 1.00 14.77 C
ATOM 4 O4' A B 7 2.248 -38.608 -13.951 1.00 14.43 O
ATOM 5 C3' A B 7 2.277 -37.411 -11.900 1.00 15.71 C
ATOM 6 C2' A B 7 3.615 -37.269 -12.640 1.00 13.97 C
ATOM 7 O2' A B 7 4.759 -37.282 -11.815 1.00 15.58 O
ATOM 8 C1' A B 7 3.582 -38.530 -13.532 1.00 14.54 C
ATOM 9 N9 A B 7 4.403 -38.377 -14.734 1.00 13.46 N
ATOM 10 C8 A B 7 4.140 -37.537 -15.796 1.00 13.20 C
ATOM 11 N7 A B 7 5.045 -37.599 -16.748 1.00 13.99 N
ATOM 12 C5 A B 7 5.958 -38.541 -16.282 1.00 13.13 C
ATOM 13 C6 A B 7 7.147 -39.044 -16.836 1.00 14.46 C
ATOM 14 N6 A B 7 7.644 -38.663 -18.018 1.00 15.40 N
ATOM 15 N1 A B 7 7.805 -39.961 -16.107 1.00 15.60 N
ATOM 16 C2 A B 7 7.325 -40.349 -14.918 1.00 15.38 C
ATOM 17 N3 A B 7 6.218 -39.937 -14.300 1.00 14.57 N
ATOM 18 C4 A B 7 5.571 -39.023 -15.045 1.00 13.80 C
ATOM 19 P A B 7 0.830 -34.423 -14.349 0.33 13.81 P
ATOM 20 OP1 A B 7 -0.536 -34.325 -14.920 0.33 16.90 O
ATOM 21 OP2 A B 7 1.086 -33.946 -12.963 0.33 15.39 O
ATOM 22 O5' A B 7 1.274 -35.958 -14.390 0.33 14.35 O
ATOM 23 O3' A B 7 2.398 -38.527 -10.987 0.47 19.57 O
ATOM 24 P G B 8 1.649 -38.684 -9.561 0.47 18.63 P
ATOM 25 OP1 G B 8 0.202 -38.476 -9.816 0.47 21.95 O
ATOM 26 OP2 G B 8 2.299 -37.937 -8.449 0.47 29.36 O
ATOM 27 O5' G B 8 1.865 -40.237 -9.261 0.47 19.08 O
TER
Atoms:
C4: (4.302,-42.047,-16.176)
N3: (3.974,-41.221,-17.239)
OP1: (-1.845,-43.941,-12.856)
OP2: (0.024,-44.830,-14.377)
C2: (2.846,-40.460,-17.399)
C1': (0.719,-39.765,-16.472)
C3': (-1.210,-40.970,-17.048)
O5': (-1.025,-42.672,-14.873)
O4': (-0.033,-39.952,-15.288)
C5': (-1.751,-41.453,-14.588)
P: (-0.654,-43.688,-13.705)
C4': (-1.367,-40.421,-15.632)
C2': (-0.206,-40.003,-17.652)
O2': (-0.816,-38.793,-18.074)
N1: (1.942,-40.556,-16.357)
O4: (5.365,-42.670,-16.202)
O2: (2.637,-39.734,-18.370)
C6: (2.199,-41.365,-15.272)
C5: (3.322,-42.091,-15.132)
O3': (-2.456,-40.917,-17.735)
N3: (3.974,-41.221,-17.239)
OP1: (-1.845,-43.941,-12.856)
OP2: (0.024,-44.830,-14.377)
C2: (2.846,-40.460,-17.399)
C1': (0.719,-39.765,-16.472)
C3': (-1.210,-40.970,-17.048)
O5': (-1.025,-42.672,-14.873)
O4': (-0.033,-39.952,-15.288)
C5': (-1.751,-41.453,-14.588)
P: (-0.654,-43.688,-13.705)
C4': (-1.367,-40.421,-15.632)
C2': (-0.206,-40.003,-17.652)
O2': (-0.816,-38.793,-18.074)
N1: (1.942,-40.556,-16.357)
O4: (5.365,-42.670,-16.202)
O2: (2.637,-39.734,-18.370)
C6: (2.199,-41.365,-15.272)
C5: (3.322,-42.091,-15.132)
O3': (-2.456,-40.917,-17.735)
OP1: (-0.536,-34.325,-14.920)
OP2: (1.086,-33.946,-12.963)
C3': (2.277,-37.411,-11.900)
C1': (3.582,-38.530,-13.532)
C5': (0.478,-36.942,-13.698)
O4': (2.248,-38.608,-13.951)
C8: (4.140,-37.537,-15.796)
O2': (4.759,-37.282,-11.815)
C6: (7.147,-39.044,-16.836)
C5: (5.958,-38.541,-16.282)
C4: (5.571,-39.023,-15.045)
N9: (4.403,-38.377,-14.734)
C4': (1.367,-37.944,-13.004)
C2': (3.615,-37.269,-12.640)
C2: (7.325,-40.349,-14.918)
N1: (7.805,-39.961,-16.107)
N3: (6.218,-39.937,-14.300)
N6: (7.644,-38.663,-18.018)
N7: (5.045,-37.599,-16.748)
P: (0.830,-34.423,-14.349)
O5': (1.274,-35.958,-14.390)
O3': (2.398,-38.527,-10.987)
OP2: (1.086,-33.946,-12.963)
C3': (2.277,-37.411,-11.900)
C1': (3.582,-38.530,-13.532)
C5': (0.478,-36.942,-13.698)
O4': (2.248,-38.608,-13.951)
C8: (4.140,-37.537,-15.796)
O2': (4.759,-37.282,-11.815)
C6: (7.147,-39.044,-16.836)
C5: (5.958,-38.541,-16.282)
C4: (5.571,-39.023,-15.045)
N9: (4.403,-38.377,-14.734)
C4': (1.367,-37.944,-13.004)
C2': (3.615,-37.269,-12.640)
C2: (7.325,-40.349,-14.918)
N1: (7.805,-39.961,-16.107)
N3: (6.218,-39.937,-14.300)
N6: (7.644,-38.663,-18.018)
N7: (5.045,-37.599,-16.748)
P: (0.830,-34.423,-14.349)
O5': (1.274,-35.958,-14.390)
O3': (2.398,-38.527,-10.987)
Image (generated by PyMOL):