ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCM:02020:02021

Extra

PDB:
ATOM 1 O3' G A2019 50.132 117.347 105.193 1.00 28.79 O
ATOM 2 P A A2020 48.574 117.278 104.858 1.00 27.26 P
ATOM 3 OP1 A A2020 47.921 116.806 106.099 1.00 29.31 O
ATOM 4 OP2 A A2020 48.368 116.542 103.582 1.00 28.66 O
ATOM 5 O5' A A2020 48.145 118.787 104.617 1.00 29.02 O
ATOM 6 C5' A A2020 47.606 119.563 105.679 1.00 25.44 C
ATOM 7 C4' A A2020 46.271 120.115 105.277 1.00 26.97 C
ATOM 8 O4' A A2020 45.362 119.030 104.923 1.00 24.91 O
ATOM 9 C3' A A2020 45.580 120.896 106.382 1.00 27.63 C
ATOM 10 O3' A A2020 44.789 121.897 105.764 1.00 34.66 O
ATOM 11 C2' A A2020 44.669 119.841 107.000 1.00 26.15 C
ATOM 12 O2' A A2020 43.562 120.398 107.670 1.00 23.95 O
ATOM 13 C1' A A2020 44.214 119.097 105.750 1.00 27.03 C
ATOM 14 N9 A A2020 43.684 117.746 105.956 1.00 26.09 N
ATOM 15 C8 A A2020 44.038 116.808 106.890 1.00 24.33 C
ATOM 16 N7 A A2020 43.380 115.678 106.784 1.00 23.64 N
ATOM 17 C5 A A2020 42.523 115.889 105.711 1.00 25.70 C
ATOM 18 C6 A A2020 41.555 115.069 105.079 1.00 23.18 C
ATOM 19 N6 A A2020 41.254 113.826 105.470 1.00 20.51 N
ATOM 20 N1 A A2020 40.894 115.582 104.022 1.00 21.95 N
ATOM 21 C2 A A2020 41.168 116.832 103.642 1.00 23.98 C
ATOM 22 N3 A A2020 42.037 117.702 104.156 1.00 25.19 N
ATOM 23 C4 A A2020 42.695 117.161 105.197 1.00 26.77 C
ATOM 24 P G A2021 45.403 123.358 105.497 1.00 36.87 P
ATOM 25 OP1 G A2021 45.813 123.398 104.064 1.00 38.68 O
ATOM 26 OP2 G A2021 46.397 123.675 106.563 1.00 35.70 O
ATOM 27 O5' G A2021 44.144 124.311 105.697 1.00 34.19 O
TER

ATOM 1 O3' A B2020 44.789 121.897 105.764 1.00 34.66 O
ATOM 2 P G B2021 45.403 123.358 105.497 1.00 36.87 P
ATOM 3 OP1 G B2021 45.813 123.398 104.064 1.00 38.68 O
ATOM 4 OP2 G B2021 46.397 123.675 106.563 1.00 35.70 O
ATOM 5 O5' G B2021 44.144 124.311 105.697 1.00 34.19 O
ATOM 6 C5' G B2021 43.588 124.497 107.008 1.00 30.85 C
ATOM 7 C4' G B2021 42.187 125.046 106.916 1.00 30.51 C
ATOM 8 O4' G B2021 42.220 126.270 106.145 1.00 26.68 O
ATOM 9 C3' G B2021 41.158 124.183 106.201 1.00 29.46 C
ATOM 10 O3' G B2021 40.599 123.221 107.091 1.00 28.86 O
ATOM 11 C2' G B2021 40.128 125.222 105.788 1.00 28.63 C
ATOM 12 O2' G B2021 39.337 125.631 106.886 1.00 27.51 O
ATOM 13 C1' G B2021 41.029 126.393 105.398 1.00 27.98 C
ATOM 14 N9 G B2021 41.404 126.447 103.989 1.00 29.69 N
ATOM 15 C8 G B2021 42.680 126.522 103.494 1.00 29.97 C
ATOM 16 N7 G B2021 42.722 126.612 102.194 1.00 31.37 N
ATOM 17 C5 G B2021 41.392 126.585 101.804 1.00 30.05 C
ATOM 18 C6 G B2021 40.822 126.655 100.518 1.00 29.83 C
ATOM 19 O6 G B2021 41.395 126.787 99.436 1.00 29.51 O
ATOM 20 N1 G B2021 39.436 126.566 100.568 1.00 31.82 N
ATOM 21 C2 G B2021 38.695 126.441 101.715 1.00 30.63 C
ATOM 22 N2 G B2021 37.368 126.378 101.558 1.00 31.67 N
ATOM 23 N3 G B2021 39.218 126.385 102.926 1.00 29.87 N
ATOM 24 C4 G B2021 40.563 126.463 102.897 1.00 29.76 C
ATOM 25 P U B2022 40.459 121.692 106.627 1.00 30.82 P
ATOM 26 OP1 U B2022 40.041 120.912 107.815 1.00 30.31 O
ATOM 27 OP2 U B2022 41.686 121.304 105.898 1.00 31.50 O
ATOM 28 O5' U B2022 39.265 121.716 105.574 1.00 29.83 O
TER

Atoms:
OP1: (47.921,116.806,106.099)
OP2: (48.368,116.542,103.582)
C3': (45.580,120.896,106.382)
C1': (44.214,119.097,105.750)
C5': (47.606,119.563,105.679)
O4': (45.362,119.030,104.923)
C8: (44.038,116.808,106.890)
O2': (43.562,120.398,107.670)
C6: (41.555,115.069,105.079)
C5: (42.523,115.889,105.711)
C4: (42.695,117.161,105.197)
P: (48.574,117.278,104.858)
C4': (46.271,120.115,105.277)
C2': (44.669,119.841,107.000)
C2: (41.168,116.832,103.642)
N1: (40.894,115.582,104.022)
N3: (42.037,117.702,104.156)
N6: (41.254,113.826,105.470)
N7: (43.380,115.678,106.784)
N9: (43.684,117.746,105.956)
O5': (48.145,118.787,104.617)
O3': (44.789,121.897,105.764)
OP1: (45.813,123.398,104.064)
OP2: (46.397,123.675,106.563)
C3': (41.158,124.183,106.201)
C1': (41.029,126.393,105.398)
C5': (43.588,124.497,107.008)
O6: (41.395,126.787,99.436)
O4': (42.220,126.270,106.145)
C8: (42.680,126.522,103.494)
C2: (38.695,126.441,101.715)
C6: (40.822,126.655,100.518)
C5: (41.392,126.585,101.804)
C4: (40.563,126.463,102.897)
P: (45.403,123.358,105.497)
C4': (42.187,125.046,106.916)
C2': (40.128,125.222,105.788)
O2': (39.337,125.631,106.886)
N1: (39.436,126.566,100.568)
N2: (37.368,126.378,101.558)
N3: (39.218,126.385,102.926)
N7: (42.722,126.612,102.194)
N9: (41.404,126.447,103.989)
O5': (44.144,124.311,105.697)
O3': (40.599,123.221,107.091)
Image (generated by PyMOL):
PyMOL image
show in jmol