ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CD6:02020:02021

Extra

PDB:
ATOM 1 O3' G A2019 50.005 118.964 105.891 1.00 38.71 O
ATOM 2 P A A2020 48.439 118.981 105.583 1.00 39.67 P
ATOM 3 OP1 A A2020 47.769 118.450 106.795 1.00 39.62 O
ATOM 4 OP2 A A2020 48.205 118.325 104.270 1.00 39.42 O
ATOM 5 O5' A A2020 48.091 120.523 105.429 1.00 38.00 O
ATOM 6 C5' A A2020 47.455 121.238 106.485 1.00 38.15 C
ATOM 7 C4' A A2020 46.110 121.722 106.029 1.00 38.15 C
ATOM 8 O4' A A2020 45.309 120.580 105.618 1.00 38.54 O
ATOM 9 C3' A A2020 45.295 122.451 107.089 1.00 39.91 C
ATOM 10 O3' A A2020 44.491 123.441 106.459 1.00 44.66 O
ATOM 11 C2' A A2020 44.378 121.350 107.602 1.00 39.63 C
ATOM 12 O2' A A2020 43.189 121.846 108.175 1.00 42.07 O
ATOM 13 C1' A A2020 44.079 120.605 106.306 1.00 38.90 C
ATOM 14 N9 A A2020 43.588 119.236 106.456 1.00 37.48 N
ATOM 15 C8 A A2020 43.996 118.280 107.343 1.00 37.38 C
ATOM 16 N7 A A2020 43.345 117.149 107.238 1.00 38.58 N
ATOM 17 C5 A A2020 42.446 117.375 106.208 1.00 38.89 C
ATOM 18 C6 A A2020 41.462 116.557 105.603 1.00 38.94 C
ATOM 19 N6 A A2020 41.207 115.301 105.976 1.00 38.99 N
ATOM 20 N1 A A2020 40.744 117.083 104.592 1.00 36.71 N
ATOM 21 C2 A A2020 40.996 118.338 104.220 1.00 38.35 C
ATOM 22 N3 A A2020 41.888 119.205 104.708 1.00 39.45 N
ATOM 23 C4 A A2020 42.588 118.654 105.713 1.00 38.34 C
ATOM 24 P G A2021 45.151 124.817 105.949 1.00 46.77 P
ATOM 25 OP1 G A2021 45.287 124.709 104.466 1.00 47.36 O
ATOM 26 OP2 G A2021 46.338 125.149 106.779 1.00 47.29 O
ATOM 27 O5' G A2021 44.029 125.893 106.261 1.00 42.73 O
TER

ATOM 1 O3' A B2020 44.491 123.441 106.459 1.00 44.66 O
ATOM 2 P G B2021 45.151 124.817 105.949 1.00 46.77 P
ATOM 3 OP1 G B2021 45.287 124.709 104.466 1.00 47.36 O
ATOM 4 OP2 G B2021 46.338 125.149 106.779 1.00 47.29 O
ATOM 5 O5' G B2021 44.029 125.893 106.261 1.00 42.73 O
ATOM 6 C5' G B2021 43.533 126.043 107.591 1.00 39.44 C
ATOM 7 C4' G B2021 42.135 126.588 107.553 1.00 37.58 C
ATOM 8 O4' G B2021 42.156 127.835 106.818 1.00 37.57 O
ATOM 9 C3' G B2021 41.115 125.739 106.819 1.00 35.31 C
ATOM 10 O3' G B2021 40.583 124.749 107.691 1.00 35.40 O
ATOM 11 C2' G B2021 40.080 126.783 106.431 1.00 34.96 C
ATOM 12 O2' G B2021 39.304 127.188 107.536 1.00 32.89 O
ATOM 13 C1' G B2021 40.977 127.960 106.053 1.00 35.79 C
ATOM 14 N9 G B2021 41.373 128.008 104.648 1.00 35.92 N
ATOM 15 C8 G B2021 42.655 128.027 104.164 1.00 35.31 C
ATOM 16 N7 G B2021 42.710 128.080 102.864 1.00 35.05 N
ATOM 17 C5 G B2021 41.387 128.095 102.466 1.00 34.97 C
ATOM 18 C6 G B2021 40.836 128.144 101.178 1.00 37.56 C
ATOM 19 O6 G B2021 41.429 128.189 100.092 1.00 38.84 O
ATOM 20 N1 G B2021 39.445 128.136 101.217 1.00 38.72 N
ATOM 21 C2 G B2021 38.691 128.083 102.361 1.00 38.18 C
ATOM 22 N2 G B2021 37.363 128.064 102.195 1.00 39.68 N
ATOM 23 N3 G B2021 39.202 128.044 103.577 1.00 36.15 N
ATOM 24 C4 G B2021 40.547 128.050 103.554 1.00 35.23 C
ATOM 25 P U B2022 40.416 123.236 107.186 1.00 35.57 P
ATOM 26 OP1 U B2022 39.966 122.481 108.370 1.00 35.64 O
ATOM 27 OP2 U B2022 41.626 122.798 106.459 1.00 35.81 O
ATOM 28 O5' U B2022 39.221 123.302 106.141 1.00 33.61 O
TER

Atoms:
OP1: (47.769,118.450,106.795)
OP2: (48.205,118.325,104.270)
C3': (45.295,122.451,107.089)
C1': (44.079,120.605,106.306)
C5': (47.455,121.238,106.485)
O4': (45.309,120.580,105.618)
C8: (43.996,118.280,107.343)
O2': (43.189,121.846,108.175)
C6: (41.462,116.557,105.603)
C5: (42.446,117.375,106.208)
C4: (42.588,118.654,105.713)
P: (48.439,118.981,105.583)
C4': (46.110,121.722,106.029)
C2': (44.378,121.350,107.602)
C2: (40.996,118.338,104.220)
N1: (40.744,117.083,104.592)
N3: (41.888,119.205,104.708)
N6: (41.207,115.301,105.976)
N7: (43.345,117.149,107.238)
N9: (43.588,119.236,106.456)
O5': (48.091,120.523,105.429)
O3': (44.491,123.441,106.459)
OP1: (45.287,124.709,104.466)
OP2: (46.338,125.149,106.779)
C3': (41.115,125.739,106.819)
C1': (40.977,127.960,106.053)
C5': (43.533,126.043,107.591)
O6: (41.429,128.189,100.092)
O4': (42.156,127.835,106.818)
C8: (42.655,128.027,104.164)
C2: (38.691,128.083,102.361)
C6: (40.836,128.144,101.178)
C5: (41.387,128.095,102.466)
C4: (40.547,128.050,103.554)
P: (45.151,124.817,105.949)
C4': (42.135,126.588,107.553)
C2': (40.080,126.783,106.431)
O2': (39.304,127.188,107.536)
N1: (39.445,128.136,101.217)
N2: (37.363,128.064,102.195)
N3: (39.202,128.044,103.577)
N7: (42.710,128.080,102.864)
N9: (41.373,128.008,104.648)
O5': (44.029,125.893,106.261)
O3': (40.583,124.749,107.691)
Image (generated by PyMOL):
PyMOL image
show in jmol