Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0347:0345
Extra
PDB:
ATOM 1 O3' G A 346 58.967 123.610 8.542 1.00 74.11 O
ATOM 2 P U A 347 59.901 122.510 7.826 1.00 74.72 P
ATOM 3 OP1 U A 347 61.219 122.424 8.516 1.00 75.28 O
ATOM 4 OP2 U A 347 59.851 122.786 6.365 1.00 76.15 O
ATOM 5 O5' U A 347 59.109 121.143 8.040 1.00 74.63 O
ATOM 6 C5' U A 347 59.213 120.387 9.267 1.00 72.29 C
ATOM 7 C4' U A 347 57.882 119.745 9.596 1.00 71.54 C
ATOM 8 O4' U A 347 56.921 120.777 9.936 1.00 70.43 O
ATOM 9 C3' U A 347 57.220 118.974 8.463 1.00 72.10 C
ATOM 10 O3' U A 347 57.744 117.646 8.371 1.00 75.21 O
ATOM 11 C2' U A 347 55.746 118.998 8.860 1.00 70.42 C
ATOM 12 O2' U A 347 55.401 118.010 9.809 1.00 69.29 O
ATOM 13 C1' U A 347 55.627 120.374 9.525 1.00 69.44 C
ATOM 14 N1 U A 347 55.022 121.444 8.712 1.00 68.57 N
ATOM 15 C2 U A 347 53.663 121.354 8.440 1.00 67.74 C
ATOM 16 O2 U A 347 52.971 120.419 8.807 1.00 67.76 O
ATOM 17 N3 U A 347 53.145 122.400 7.718 1.00 67.55 N
ATOM 18 C4 U A 347 53.823 123.504 7.246 1.00 67.92 C
ATOM 19 O4 U A 347 53.198 124.386 6.651 1.00 68.47 O
ATOM 20 C5 U A 347 55.225 123.521 7.549 1.00 67.26 C
ATOM 21 C6 U A 347 55.764 122.515 8.250 1.00 67.71 C
ATOM 22 P A A 348 57.746 116.873 6.955 1.00 77.20 P
ATOM 23 OP1 A A 348 58.328 115.524 7.208 1.00 75.94 O
ATOM 24 OP2 A A 348 58.359 117.749 5.924 1.00 76.27 O
ATOM 25 O5' A A 348 56.197 116.707 6.602 1.00 76.15 O
TER
ATOM 1 O3' C B 344 53.206 120.713 15.327 1.00 59.13 O
ATOM 2 P A B 345 54.234 120.347 14.140 1.00 61.14 P
ATOM 3 OP1 A B 345 53.447 120.011 12.924 1.00 60.54 O
ATOM 4 OP2 A B 345 55.232 119.371 14.659 1.00 59.34 O
ATOM 5 O5' A B 345 54.995 121.711 13.851 1.00 61.28 O
ATOM 6 C5' A B 345 56.126 121.743 12.972 1.00 63.00 C
ATOM 7 C4' A B 345 56.157 123.046 12.218 1.00 64.12 C
ATOM 8 O4' A B 345 55.124 123.044 11.190 1.00 65.18 O
ATOM 9 C3' A B 345 55.919 124.292 13.065 1.00 64.74 C
ATOM 10 O3' A B 345 56.749 125.336 12.586 1.00 66.34 O
ATOM 11 C2' A B 345 54.447 124.600 12.798 1.00 65.27 C
ATOM 12 O2' A B 345 54.104 125.962 12.967 1.00 64.87 O
ATOM 13 C1' A B 345 54.315 124.192 11.333 1.00 65.10 C
ATOM 14 N9 A B 345 52.945 123.869 10.926 1.00 65.89 N
ATOM 15 C8 A B 345 52.191 122.765 11.249 1.00 66.62 C
ATOM 16 N7 A B 345 50.978 122.786 10.746 1.00 66.83 N
ATOM 17 C5 A B 345 50.929 123.981 10.038 1.00 66.66 C
ATOM 18 C6 A B 345 49.908 124.598 9.277 1.00 66.37 C
ATOM 19 N6 A B 345 48.693 124.073 9.095 1.00 65.49 N
ATOM 20 N1 A B 345 50.187 125.791 8.705 1.00 65.87 N
ATOM 21 C2 A B 345 51.407 126.320 8.883 1.00 66.70 C
ATOM 22 N3 A B 345 52.446 125.839 9.570 1.00 66.48 N
ATOM 23 C4 A B 345 52.138 124.654 10.133 1.00 66.83 C
ATOM 24 P G B 346 58.172 125.601 13.283 1.00 66.87 P
ATOM 25 OP1 G B 346 58.563 124.375 14.015 1.00 68.08 O
ATOM 26 OP2 G B 346 58.089 126.893 14.003 1.00 66.83 O
ATOM 27 O5' G B 346 59.178 125.742 12.055 1.00 69.26 O
TER
ATOM 2 P U A 347 59.901 122.510 7.826 1.00 74.72 P
ATOM 3 OP1 U A 347 61.219 122.424 8.516 1.00 75.28 O
ATOM 4 OP2 U A 347 59.851 122.786 6.365 1.00 76.15 O
ATOM 5 O5' U A 347 59.109 121.143 8.040 1.00 74.63 O
ATOM 6 C5' U A 347 59.213 120.387 9.267 1.00 72.29 C
ATOM 7 C4' U A 347 57.882 119.745 9.596 1.00 71.54 C
ATOM 8 O4' U A 347 56.921 120.777 9.936 1.00 70.43 O
ATOM 9 C3' U A 347 57.220 118.974 8.463 1.00 72.10 C
ATOM 10 O3' U A 347 57.744 117.646 8.371 1.00 75.21 O
ATOM 11 C2' U A 347 55.746 118.998 8.860 1.00 70.42 C
ATOM 12 O2' U A 347 55.401 118.010 9.809 1.00 69.29 O
ATOM 13 C1' U A 347 55.627 120.374 9.525 1.00 69.44 C
ATOM 14 N1 U A 347 55.022 121.444 8.712 1.00 68.57 N
ATOM 15 C2 U A 347 53.663 121.354 8.440 1.00 67.74 C
ATOM 16 O2 U A 347 52.971 120.419 8.807 1.00 67.76 O
ATOM 17 N3 U A 347 53.145 122.400 7.718 1.00 67.55 N
ATOM 18 C4 U A 347 53.823 123.504 7.246 1.00 67.92 C
ATOM 19 O4 U A 347 53.198 124.386 6.651 1.00 68.47 O
ATOM 20 C5 U A 347 55.225 123.521 7.549 1.00 67.26 C
ATOM 21 C6 U A 347 55.764 122.515 8.250 1.00 67.71 C
ATOM 22 P A A 348 57.746 116.873 6.955 1.00 77.20 P
ATOM 23 OP1 A A 348 58.328 115.524 7.208 1.00 75.94 O
ATOM 24 OP2 A A 348 58.359 117.749 5.924 1.00 76.27 O
ATOM 25 O5' A A 348 56.197 116.707 6.602 1.00 76.15 O
TER
ATOM 1 O3' C B 344 53.206 120.713 15.327 1.00 59.13 O
ATOM 2 P A B 345 54.234 120.347 14.140 1.00 61.14 P
ATOM 3 OP1 A B 345 53.447 120.011 12.924 1.00 60.54 O
ATOM 4 OP2 A B 345 55.232 119.371 14.659 1.00 59.34 O
ATOM 5 O5' A B 345 54.995 121.711 13.851 1.00 61.28 O
ATOM 6 C5' A B 345 56.126 121.743 12.972 1.00 63.00 C
ATOM 7 C4' A B 345 56.157 123.046 12.218 1.00 64.12 C
ATOM 8 O4' A B 345 55.124 123.044 11.190 1.00 65.18 O
ATOM 9 C3' A B 345 55.919 124.292 13.065 1.00 64.74 C
ATOM 10 O3' A B 345 56.749 125.336 12.586 1.00 66.34 O
ATOM 11 C2' A B 345 54.447 124.600 12.798 1.00 65.27 C
ATOM 12 O2' A B 345 54.104 125.962 12.967 1.00 64.87 O
ATOM 13 C1' A B 345 54.315 124.192 11.333 1.00 65.10 C
ATOM 14 N9 A B 345 52.945 123.869 10.926 1.00 65.89 N
ATOM 15 C8 A B 345 52.191 122.765 11.249 1.00 66.62 C
ATOM 16 N7 A B 345 50.978 122.786 10.746 1.00 66.83 N
ATOM 17 C5 A B 345 50.929 123.981 10.038 1.00 66.66 C
ATOM 18 C6 A B 345 49.908 124.598 9.277 1.00 66.37 C
ATOM 19 N6 A B 345 48.693 124.073 9.095 1.00 65.49 N
ATOM 20 N1 A B 345 50.187 125.791 8.705 1.00 65.87 N
ATOM 21 C2 A B 345 51.407 126.320 8.883 1.00 66.70 C
ATOM 22 N3 A B 345 52.446 125.839 9.570 1.00 66.48 N
ATOM 23 C4 A B 345 52.138 124.654 10.133 1.00 66.83 C
ATOM 24 P G B 346 58.172 125.601 13.283 1.00 66.87 P
ATOM 25 OP1 G B 346 58.563 124.375 14.015 1.00 68.08 O
ATOM 26 OP2 G B 346 58.089 126.893 14.003 1.00 66.83 O
ATOM 27 O5' G B 346 59.178 125.742 12.055 1.00 69.26 O
TER
Atoms:
C4: (53.823,123.504,7.246)
N3: (53.145,122.400,7.718)
OP1: (61.219,122.424,8.516)
OP2: (59.851,122.786,6.365)
C2: (53.663,121.354,8.440)
C1': (55.627,120.374,9.525)
C3': (57.220,118.974,8.463)
O5': (59.109,121.143,8.040)
O4': (56.921,120.777,9.936)
C5': (59.213,120.387,9.267)
P: (59.901,122.510,7.826)
C4': (57.882,119.745,9.596)
C2': (55.746,118.998,8.860)
O2': (55.401,118.010,9.809)
N1: (55.022,121.444,8.712)
O4: (53.198,124.386,6.651)
O2: (52.971,120.419,8.807)
C6: (55.764,122.515,8.250)
C5: (55.225,123.521,7.549)
O3': (57.744,117.646,8.371)
N3: (53.145,122.400,7.718)
OP1: (61.219,122.424,8.516)
OP2: (59.851,122.786,6.365)
C2: (53.663,121.354,8.440)
C1': (55.627,120.374,9.525)
C3': (57.220,118.974,8.463)
O5': (59.109,121.143,8.040)
O4': (56.921,120.777,9.936)
C5': (59.213,120.387,9.267)
P: (59.901,122.510,7.826)
C4': (57.882,119.745,9.596)
C2': (55.746,118.998,8.860)
O2': (55.401,118.010,9.809)
N1: (55.022,121.444,8.712)
O4: (53.198,124.386,6.651)
O2: (52.971,120.419,8.807)
C6: (55.764,122.515,8.250)
C5: (55.225,123.521,7.549)
O3': (57.744,117.646,8.371)
OP1: (53.447,120.011,12.924)
OP2: (55.232,119.371,14.659)
C3': (55.919,124.292,13.065)
C1': (54.315,124.192,11.333)
C5': (56.126,121.743,12.972)
O4': (55.124,123.044,11.190)
C8: (52.191,122.765,11.249)
O2': (54.104,125.962,12.967)
C6: (49.908,124.598,9.277)
C5: (50.929,123.981,10.038)
C4: (52.138,124.654,10.133)
P: (54.234,120.347,14.140)
C4': (56.157,123.046,12.218)
C2': (54.447,124.600,12.798)
C2: (51.407,126.320,8.883)
N1: (50.187,125.791,8.705)
N3: (52.446,125.839,9.570)
N6: (48.693,124.073,9.095)
N7: (50.978,122.786,10.746)
N9: (52.945,123.869,10.926)
O5': (54.995,121.711,13.851)
O3': (56.749,125.336,12.586)
OP2: (55.232,119.371,14.659)
C3': (55.919,124.292,13.065)
C1': (54.315,124.192,11.333)
C5': (56.126,121.743,12.972)
O4': (55.124,123.044,11.190)
C8: (52.191,122.765,11.249)
O2': (54.104,125.962,12.967)
C6: (49.908,124.598,9.277)
C5: (50.929,123.981,10.038)
C4: (52.138,124.654,10.133)
P: (54.234,120.347,14.140)
C4': (56.157,123.046,12.218)
C2': (54.447,124.600,12.798)
C2: (51.407,126.320,8.883)
N1: (50.187,125.791,8.705)
N3: (52.446,125.839,9.570)
N6: (48.693,124.073,9.095)
N7: (50.978,122.786,10.746)
N9: (52.945,123.869,10.926)
O5': (54.995,121.711,13.851)
O3': (56.749,125.336,12.586)
Image (generated by PyMOL):