ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1G:A242:A240

Extra

PDB:
ATOM 1 O3' G A 241 -39.662 -1.440 -42.186 1.00112.04 O
ATOM 2 P U A 242 -41.063 -0.964 -41.547 1.00 94.88 P
ATOM 3 OP1 U A 242 -41.948 -2.143 -41.348 1.00 72.52 O
ATOM 4 OP2 U A 242 -41.534 0.196 -42.336 1.00 92.36 O
ATOM 5 O5' U A 242 -40.637 -0.428 -40.104 1.00 73.55 O
ATOM 6 C5' U A 242 -39.652 0.586 -39.961 1.00 76.71 C
ATOM 7 C4' U A 242 -39.796 1.239 -38.598 1.00 76.77 C
ATOM 8 O4' U A 242 -39.613 0.239 -37.564 1.00 80.45 O
ATOM 9 C3' U A 242 -38.778 2.317 -38.271 1.00 68.40 C
ATOM 10 O3' U A 242 -39.237 3.553 -38.760 1.00 72.43 O
ATOM 11 C2' U A 242 -38.788 2.302 -36.751 1.00 69.52 C
ATOM 12 O2' U A 242 -39.881 3.021 -36.206 1.00 70.75 O
ATOM 13 C1' U A 242 -38.927 0.808 -36.466 1.00 73.68 C
ATOM 14 N1 U A 242 -37.635 0.099 -36.344 1.00 67.65 N
ATOM 15 C2 U A 242 -36.696 0.556 -35.449 1.00 66.36 C
ATOM 16 O2 U A 242 -36.855 1.524 -34.737 1.00 65.94 O
ATOM 17 N3 U A 242 -35.542 -0.167 -35.410 1.00 69.49 N
ATOM 18 C4 U A 242 -35.247 -1.280 -36.163 1.00 67.85 C
ATOM 19 O4 U A 242 -34.157 -1.808 -36.004 1.00 67.59 O
ATOM 20 C5 U A 242 -36.276 -1.705 -37.080 1.00 69.53 C
ATOM 21 C6 U A 242 -37.410 -1.006 -37.133 1.00 69.85 C
ATOM 22 P U A 243 -38.617 4.125 -40.114 1.00 88.19 P
ATOM 23 OP1 U A 243 -39.584 5.086 -40.685 1.00 89.04 O
ATOM 24 OP2 U A 243 -38.151 2.982 -40.932 1.00 77.97 O
ATOM 25 O5' U A 243 -37.355 4.942 -39.576 1.00 94.27 O
TER

ATOM 1 O3' U B 239 -43.582 -0.817 -34.874 1.00 75.31 O
ATOM 2 P A B 240 -43.097 -2.192 -34.242 1.00102.69 P
ATOM 3 OP1 A B 240 -44.036 -3.233 -34.721 1.00103.85 O
ATOM 4 OP2 A B 240 -42.903 -1.961 -32.795 1.00 93.88 O
ATOM 5 O5' A B 240 -41.651 -2.437 -34.879 1.00 84.39 O
ATOM 6 C5' A B 240 -41.537 -2.625 -36.279 1.00 86.62 C
ATOM 7 C4' A B 240 -40.392 -3.565 -36.605 1.00 79.60 C
ATOM 8 O4' A B 240 -39.135 -2.923 -36.298 1.00 79.12 O
ATOM 9 C3' A B 240 -40.411 -4.898 -35.860 1.00 87.77 C
ATOM 10 O3' A B 240 -40.581 -6.036 -36.745 1.00 97.78 O
ATOM 11 C2' A B 240 -39.118 -4.948 -35.026 1.00 85.99 C
ATOM 12 O2' A B 240 -38.296 -6.073 -35.279 1.00 83.46 O
ATOM 13 C1' A B 240 -38.357 -3.687 -35.407 1.00 82.11 C
ATOM 14 N9 A B 240 -38.133 -2.832 -34.266 1.00 81.81 N
ATOM 15 C8 A B 240 -39.022 -1.950 -33.729 1.00 85.24 C
ATOM 16 N7 A B 240 -38.549 -1.299 -32.694 1.00 94.81 N
ATOM 17 C5 A B 240 -37.260 -1.791 -32.545 1.00 97.45 C
ATOM 18 C6 A B 240 -36.228 -1.502 -31.621 1.00103.01 C
ATOM 19 N6 A B 240 -36.333 -0.604 -30.625 1.00 91.94 N
ATOM 20 N1 A B 240 -35.070 -2.188 -31.771 1.00102.50 N
ATOM 21 C2 A B 240 -34.963 -3.084 -32.767 1.00 96.20 C
ATOM 22 N3 A B 240 -35.862 -3.435 -33.689 1.00 90.65 N
ATOM 23 C4 A B 240 -36.994 -2.743 -33.515 1.00 87.73 C
ATOM 24 P G B 241 -40.257 -6.131 -38.321 1.00111.63 P
ATOM 25 OP1 G B 241 -41.518 -6.546 -38.978 1.00104.19 O
ATOM 26 OP2 G B 241 -39.038 -6.956 -38.467 1.00 99.30 O
ATOM 27 O5' G B 241 -39.876 -4.679 -38.854 1.00 95.20 O
TER

Atoms:
C4: (-35.247,-1.280,-36.163)
N3: (-35.542,-0.167,-35.410)
OP1: (-41.948,-2.143,-41.348)
OP2: (-41.534,0.196,-42.336)
C2: (-36.696,0.556,-35.449)
C1': (-38.927,0.808,-36.466)
C3': (-38.778,2.317,-38.271)
O5': (-40.637,-0.428,-40.104)
O4': (-39.613,0.239,-37.564)
C5': (-39.652,0.586,-39.961)
P: (-41.063,-0.964,-41.547)
C4': (-39.796,1.239,-38.598)
C2': (-38.788,2.302,-36.751)
O2': (-39.881,3.021,-36.206)
N1: (-37.635,0.099,-36.344)
O4: (-34.157,-1.808,-36.004)
O2: (-36.855,1.524,-34.737)
C6: (-37.410,-1.006,-37.133)
C5: (-36.276,-1.705,-37.080)
O3': (-39.237,3.553,-38.760)
OP1: (-44.036,-3.233,-34.721)
OP2: (-42.903,-1.961,-32.795)
C3': (-40.411,-4.898,-35.860)
C1': (-38.357,-3.687,-35.407)
C5': (-41.537,-2.625,-36.279)
O4': (-39.135,-2.923,-36.298)
C8: (-39.022,-1.950,-33.729)
O2': (-38.296,-6.073,-35.279)
C6: (-36.228,-1.502,-31.621)
C5: (-37.260,-1.791,-32.545)
C4: (-36.994,-2.743,-33.515)
P: (-43.097,-2.192,-34.242)
C4': (-40.392,-3.565,-36.605)
C2': (-39.118,-4.948,-35.026)
C2: (-34.963,-3.084,-32.767)
N1: (-35.070,-2.188,-31.771)
N3: (-35.862,-3.435,-33.689)
N6: (-36.333,-0.604,-30.625)
N7: (-38.549,-1.299,-32.694)
N9: (-38.133,-2.832,-34.266)
O5': (-41.651,-2.437,-34.879)
O3': (-40.581,-6.036,-36.745)
Image (generated by PyMOL):
PyMOL image
show in jmol