ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1QVG:0347:0345

Extra

PDB:
ATOM 1 O3' G A 346 59.469 123.642 8.533 1.00108.82 O
ATOM 2 P U A 347 60.352 122.296 8.420 1.00108.40 P
ATOM 3 OP1 U A 347 61.249 122.280 9.610 1.00109.24 O
ATOM 4 OP2 U A 347 60.937 122.160 7.074 1.00107.24 O
ATOM 5 O5' U A 347 59.258 121.143 8.578 1.00108.66 O
ATOM 6 C5' U A 347 59.154 120.343 9.798 1.00107.66 C
ATOM 7 C4' U A 347 57.803 119.657 9.870 1.00107.43 C
ATOM 8 O4' U A 347 56.767 120.635 10.147 1.00107.24 O
ATOM 9 C3' U A 347 57.351 118.951 8.598 1.00107.25 C
ATOM 10 O3' U A 347 57.915 117.627 8.541 1.00107.44 O
ATOM 11 C2' U A 347 55.827 118.958 8.734 1.00106.64 C
ATOM 12 O2' U A 347 55.315 117.935 9.551 1.00106.40 O
ATOM 13 C1' U A 347 55.578 120.276 9.472 1.00106.56 C
ATOM 14 N1 U A 347 55.154 121.403 8.629 1.00106.88 N
ATOM 15 C2 U A 347 53.820 121.448 8.244 1.00107.53 C
ATOM 16 O2 U A 347 52.996 120.593 8.563 1.00108.05 O
ATOM 17 N3 U A 347 53.487 122.532 7.470 1.00107.59 N
ATOM 18 C4 U A 347 54.324 123.553 7.056 1.00107.52 C
ATOM 19 O4 U A 347 53.860 124.477 6.385 1.00108.68 O
ATOM 20 C5 U A 347 55.681 123.432 7.492 1.00106.59 C
ATOM 21 C6 U A 347 56.042 122.390 8.240 1.00106.34 C
ATOM 22 P A A 348 58.040 116.843 7.130 1.00107.40 P
ATOM 23 OP1 A A 348 58.678 115.528 7.446 1.00106.53 O
ATOM 24 OP2 A A 348 58.658 117.733 6.103 1.00107.33 O
ATOM 25 O5' A A 348 56.528 116.581 6.691 1.00106.60 O
TER

ATOM 1 O3' C B 344 53.632 120.771 15.519 1.00 89.88 O
ATOM 2 P A B 345 54.770 120.487 14.414 1.00 92.37 P
ATOM 3 OP1 A B 345 54.083 120.270 13.101 1.00 91.68 O
ATOM 4 OP2 A B 345 55.723 119.464 14.933 1.00 91.23 O
ATOM 5 O5' A B 345 55.557 121.863 14.298 1.00 93.22 O
ATOM 6 C5' A B 345 56.682 121.970 13.426 1.00 95.05 C
ATOM 7 C4' A B 345 56.519 123.144 12.504 1.00 96.23 C
ATOM 8 O4' A B 345 55.394 122.913 11.612 1.00 97.17 O
ATOM 9 C3' A B 345 56.258 124.482 13.176 1.00 97.21 C
ATOM 10 O3' A B 345 57.192 125.402 12.654 1.00 98.93 O
ATOM 11 C2' A B 345 54.804 124.793 12.808 1.00 97.82 C
ATOM 12 O2' A B 345 54.522 126.179 12.732 1.00 99.08 O
ATOM 13 C1' A B 345 54.680 124.117 11.446 1.00 97.62 C
ATOM 14 N9 A B 345 53.306 123.797 11.032 1.00 97.44 N
ATOM 15 C8 A B 345 52.563 122.675 11.327 1.00 96.67 C
ATOM 16 N7 A B 345 51.355 122.689 10.816 1.00 96.76 N
ATOM 17 C5 A B 345 51.289 123.900 10.135 1.00 98.12 C
ATOM 18 C6 A B 345 50.250 124.528 9.378 1.00 98.39 C
ATOM 19 N6 A B 345 49.037 123.998 9.189 1.00 97.43 N
ATOM 20 N1 A B 345 50.515 125.737 8.827 1.00 98.34 N
ATOM 21 C2 A B 345 51.734 126.279 9.023 1.00 98.91 C
ATOM 22 N3 A B 345 52.783 125.795 9.712 1.00 98.51 N
ATOM 23 C4 A B 345 52.490 124.591 10.251 1.00 98.21 C
ATOM 24 P G B 346 58.587 125.600 13.415 1.00100.60 P
ATOM 25 OP1 G B 346 58.801 124.377 14.223 1.00101.57 O
ATOM 26 OP2 G B 346 58.585 126.925 14.077 1.00100.62 O
ATOM 27 O5' G B 346 59.689 125.568 12.262 1.00103.92 O
TER

Atoms:
C4: (54.324,123.553,7.056)
N3: (53.487,122.532,7.470)
OP1: (61.249,122.280,9.610)
OP2: (60.937,122.160,7.074)
C2: (53.820,121.448,8.244)
C1': (55.578,120.276,9.472)
C3': (57.351,118.951,8.598)
O5': (59.258,121.143,8.578)
O4': (56.767,120.635,10.147)
C5': (59.154,120.343,9.798)
P: (60.352,122.296,8.420)
C4': (57.803,119.657,9.870)
C2': (55.827,118.958,8.734)
O2': (55.315,117.935,9.551)
N1: (55.154,121.403,8.629)
O4: (53.860,124.477,6.385)
O2: (52.996,120.593,8.563)
C6: (56.042,122.390,8.240)
C5: (55.681,123.432,7.492)
O3': (57.915,117.627,8.541)
OP1: (54.083,120.270,13.101)
OP2: (55.723,119.464,14.933)
C3': (56.258,124.482,13.176)
C1': (54.680,124.117,11.446)
C5': (56.682,121.970,13.426)
O4': (55.394,122.913,11.612)
C8: (52.563,122.675,11.327)
O2': (54.522,126.179,12.732)
C6: (50.250,124.528,9.378)
C5: (51.289,123.900,10.135)
C4: (52.490,124.591,10.251)
P: (54.770,120.487,14.414)
C4': (56.519,123.144,12.504)
C2': (54.804,124.793,12.808)
C2: (51.734,126.279,9.023)
N1: (50.515,125.737,8.827)
N3: (52.783,125.795,9.712)
N6: (49.037,123.998,9.189)
N7: (51.355,122.689,10.816)
N9: (53.306,123.797,11.032)
O5': (55.557,121.863,14.298)
O3': (57.192,125.402,12.654)
Image (generated by PyMOL):
PyMOL image
show in jmol