Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQE:A1042:A1086
Extra
PDB:
ATOM 1 P U A1042 209.448 131.286 -5.065 1.00 50.16 P
ATOM 2 OP1 U A1042 208.098 130.678 -5.384 1.00 53.58 O
ATOM 3 OP2 U A1042 210.697 130.683 -5.559 1.00 51.92 O
ATOM 4 O5' U A1042 209.423 132.797 -5.458 1.00 48.51 O
ATOM 5 C5' U A1042 208.756 133.732 -4.615 1.00 49.34 C
ATOM 6 C4' U A1042 207.840 134.583 -5.437 1.00 49.86 C
ATOM 7 O4' U A1042 206.765 135.081 -4.607 1.00 49.91 O
ATOM 8 C3' U A1042 208.497 135.777 -6.093 1.00 50.86 C
ATOM 9 O3' U A1042 208.333 135.723 -7.525 1.00 50.49 O
ATOM 10 C2' U A1042 208.032 136.964 -5.232 1.00 51.04 C
ATOM 11 O2' U A1042 207.928 138.231 -5.856 1.00 52.22 O
ATOM 12 C1' U A1042 206.690 136.484 -4.688 1.00 50.44 C
ATOM 13 N1 U A1042 206.400 136.989 -3.336 1.00 51.22 N
ATOM 14 C2 U A1042 205.444 137.997 -3.198 1.00 51.71 C
ATOM 15 O2 U A1042 204.853 138.503 -4.151 1.00 51.45 O
ATOM 16 N3 U A1042 205.213 138.397 -1.902 1.00 50.63 N
ATOM 17 C4 U A1042 205.829 137.920 -0.759 1.00 50.79 C
ATOM 18 O4 U A1042 205.506 138.379 0.337 1.00 50.39 O
ATOM 19 C5 U A1042 206.806 136.897 -0.984 1.00 50.73 C
ATOM 20 C6 U A1042 207.051 136.475 -2.230 1.00 50.54 C
ATOM 21 P C A1043 207.004 136.275 -8.227 1.00 51.39 P
ATOM 22 OP1 C A1043 207.408 136.701 -9.604 1.00 52.59 O
ATOM 23 OP2 C A1043 206.275 137.232 -7.365 1.00 54.09 O
ATOM 24 O5' C A1043 206.109 134.978 -8.352 1.00 51.29 O
TER
ATOM 1 O3' G B1085 200.263 139.138 0.017 1.00 48.96 O
ATOM 2 P C B1086 201.268 140.365 -0.299 1.00 49.64 P
ATOM 3 OP1 C B1086 202.644 139.774 -0.339 1.00 50.36 O
ATOM 4 OP2 C B1086 200.967 141.464 0.666 1.00 50.81 O
ATOM 5 O5' C B1086 200.874 140.874 -1.791 1.00 45.13 O
ATOM 6 C5' C B1086 201.361 140.179 -2.947 1.00 44.27 C
ATOM 7 C4' C B1086 201.345 141.074 -4.161 1.00 44.25 C
ATOM 8 O4' C B1086 199.984 141.403 -4.509 1.00 43.01 O
ATOM 9 C3' C B1086 202.045 142.410 -4.023 1.00 45.37 C
ATOM 10 O3' C B1086 203.437 142.298 -4.244 1.00 48.70 O
ATOM 11 C2' C B1086 201.345 143.266 -5.075 1.00 44.36 C
ATOM 12 O2' C B1086 201.845 143.119 -6.388 1.00 42.23 O
ATOM 13 C1' C B1086 199.918 142.727 -5.004 1.00 43.47 C
ATOM 14 N1 C B1086 199.074 143.506 -4.079 1.00 44.00 N
ATOM 15 C2 C B1086 198.418 144.660 -4.548 1.00 44.23 C
ATOM 16 O2 C B1086 198.570 145.007 -5.731 1.00 44.12 O
ATOM 17 N3 C B1086 197.637 145.364 -3.697 1.00 45.01 N
ATOM 18 C4 C B1086 197.498 144.960 -2.428 1.00 46.08 C
ATOM 19 N4 C B1086 196.716 145.681 -1.619 1.00 47.15 N
ATOM 20 C5 C B1086 198.155 143.798 -1.927 1.00 45.18 C
ATOM 21 C6 C B1086 198.925 143.110 -2.776 1.00 44.40 C
ATOM 22 P A B1087 204.454 143.192 -3.376 1.00 49.70 P
ATOM 23 OP1 A B1087 205.814 142.980 -3.958 1.00 50.39 O
ATOM 24 OP2 A B1087 204.224 142.896 -1.945 1.00 50.06 O
ATOM 25 O5' A B1087 203.998 144.684 -3.692 1.00 50.06 O
TER
ATOM 2 OP1 U A1042 208.098 130.678 -5.384 1.00 53.58 O
ATOM 3 OP2 U A1042 210.697 130.683 -5.559 1.00 51.92 O
ATOM 4 O5' U A1042 209.423 132.797 -5.458 1.00 48.51 O
ATOM 5 C5' U A1042 208.756 133.732 -4.615 1.00 49.34 C
ATOM 6 C4' U A1042 207.840 134.583 -5.437 1.00 49.86 C
ATOM 7 O4' U A1042 206.765 135.081 -4.607 1.00 49.91 O
ATOM 8 C3' U A1042 208.497 135.777 -6.093 1.00 50.86 C
ATOM 9 O3' U A1042 208.333 135.723 -7.525 1.00 50.49 O
ATOM 10 C2' U A1042 208.032 136.964 -5.232 1.00 51.04 C
ATOM 11 O2' U A1042 207.928 138.231 -5.856 1.00 52.22 O
ATOM 12 C1' U A1042 206.690 136.484 -4.688 1.00 50.44 C
ATOM 13 N1 U A1042 206.400 136.989 -3.336 1.00 51.22 N
ATOM 14 C2 U A1042 205.444 137.997 -3.198 1.00 51.71 C
ATOM 15 O2 U A1042 204.853 138.503 -4.151 1.00 51.45 O
ATOM 16 N3 U A1042 205.213 138.397 -1.902 1.00 50.63 N
ATOM 17 C4 U A1042 205.829 137.920 -0.759 1.00 50.79 C
ATOM 18 O4 U A1042 205.506 138.379 0.337 1.00 50.39 O
ATOM 19 C5 U A1042 206.806 136.897 -0.984 1.00 50.73 C
ATOM 20 C6 U A1042 207.051 136.475 -2.230 1.00 50.54 C
ATOM 21 P C A1043 207.004 136.275 -8.227 1.00 51.39 P
ATOM 22 OP1 C A1043 207.408 136.701 -9.604 1.00 52.59 O
ATOM 23 OP2 C A1043 206.275 137.232 -7.365 1.00 54.09 O
ATOM 24 O5' C A1043 206.109 134.978 -8.352 1.00 51.29 O
TER
ATOM 1 O3' G B1085 200.263 139.138 0.017 1.00 48.96 O
ATOM 2 P C B1086 201.268 140.365 -0.299 1.00 49.64 P
ATOM 3 OP1 C B1086 202.644 139.774 -0.339 1.00 50.36 O
ATOM 4 OP2 C B1086 200.967 141.464 0.666 1.00 50.81 O
ATOM 5 O5' C B1086 200.874 140.874 -1.791 1.00 45.13 O
ATOM 6 C5' C B1086 201.361 140.179 -2.947 1.00 44.27 C
ATOM 7 C4' C B1086 201.345 141.074 -4.161 1.00 44.25 C
ATOM 8 O4' C B1086 199.984 141.403 -4.509 1.00 43.01 O
ATOM 9 C3' C B1086 202.045 142.410 -4.023 1.00 45.37 C
ATOM 10 O3' C B1086 203.437 142.298 -4.244 1.00 48.70 O
ATOM 11 C2' C B1086 201.345 143.266 -5.075 1.00 44.36 C
ATOM 12 O2' C B1086 201.845 143.119 -6.388 1.00 42.23 O
ATOM 13 C1' C B1086 199.918 142.727 -5.004 1.00 43.47 C
ATOM 14 N1 C B1086 199.074 143.506 -4.079 1.00 44.00 N
ATOM 15 C2 C B1086 198.418 144.660 -4.548 1.00 44.23 C
ATOM 16 O2 C B1086 198.570 145.007 -5.731 1.00 44.12 O
ATOM 17 N3 C B1086 197.637 145.364 -3.697 1.00 45.01 N
ATOM 18 C4 C B1086 197.498 144.960 -2.428 1.00 46.08 C
ATOM 19 N4 C B1086 196.716 145.681 -1.619 1.00 47.15 N
ATOM 20 C5 C B1086 198.155 143.798 -1.927 1.00 45.18 C
ATOM 21 C6 C B1086 198.925 143.110 -2.776 1.00 44.40 C
ATOM 22 P A B1087 204.454 143.192 -3.376 1.00 49.70 P
ATOM 23 OP1 A B1087 205.814 142.980 -3.958 1.00 50.39 O
ATOM 24 OP2 A B1087 204.224 142.896 -1.945 1.00 50.06 O
ATOM 25 O5' A B1087 203.998 144.684 -3.692 1.00 50.06 O
TER
Atoms:
C4: (205.829,137.920,-0.759)
N3: (205.213,138.397,-1.902)
OP1: (208.098,130.678,-5.384)
OP2: (210.697,130.683,-5.559)
C2: (205.444,137.997,-3.198)
C1': (206.690,136.484,-4.688)
C3': (208.497,135.777,-6.093)
O5': (209.423,132.797,-5.458)
O4': (206.765,135.081,-4.607)
C5': (208.756,133.732,-4.615)
P: (209.448,131.286,-5.065)
C4': (207.840,134.583,-5.437)
C2': (208.032,136.964,-5.232)
O2': (207.928,138.231,-5.856)
N1: (206.400,136.989,-3.336)
O4: (205.506,138.379,0.337)
O2: (204.853,138.503,-4.151)
C6: (207.051,136.475,-2.230)
C5: (206.806,136.897,-0.984)
O3': (208.333,135.723,-7.525)
N3: (205.213,138.397,-1.902)
OP1: (208.098,130.678,-5.384)
OP2: (210.697,130.683,-5.559)
C2: (205.444,137.997,-3.198)
C1': (206.690,136.484,-4.688)
C3': (208.497,135.777,-6.093)
O5': (209.423,132.797,-5.458)
O4': (206.765,135.081,-4.607)
C5': (208.756,133.732,-4.615)
P: (209.448,131.286,-5.065)
C4': (207.840,134.583,-5.437)
C2': (208.032,136.964,-5.232)
O2': (207.928,138.231,-5.856)
N1: (206.400,136.989,-3.336)
O4: (205.506,138.379,0.337)
O2: (204.853,138.503,-4.151)
C6: (207.051,136.475,-2.230)
C5: (206.806,136.897,-0.984)
O3': (208.333,135.723,-7.525)
C2: (198.418,144.660,-4.548)
OP1: (202.644,139.774,-0.339)
OP2: (200.967,141.464,0.666)
C4: (197.498,144.960,-2.428)
O5': (200.874,140.874,-1.791)
C3': (202.045,142.410,-4.023)
C1': (199.918,142.727,-5.004)
O4': (199.984,141.403,-4.509)
C5': (201.361,140.179,-2.947)
P: (201.268,140.365,-0.299)
O2: (198.570,145.007,-5.731)
C4': (201.345,141.074,-4.161)
C2': (201.345,143.266,-5.075)
O2': (201.845,143.119,-6.388)
N1: (199.074,143.506,-4.079)
N3: (197.637,145.364,-3.697)
N4: (196.716,145.681,-1.619)
C6: (198.925,143.110,-2.776)
C5: (198.155,143.798,-1.927)
O3': (203.437,142.298,-4.244)
OP1: (202.644,139.774,-0.339)
OP2: (200.967,141.464,0.666)
C4: (197.498,144.960,-2.428)
O5': (200.874,140.874,-1.791)
C3': (202.045,142.410,-4.023)
C1': (199.918,142.727,-5.004)
O4': (199.984,141.403,-4.509)
C5': (201.361,140.179,-2.947)
P: (201.268,140.365,-0.299)
O2: (198.570,145.007,-5.731)
C4': (201.345,141.074,-4.161)
C2': (201.345,143.266,-5.075)
O2': (201.845,143.119,-6.388)
N1: (199.074,143.506,-4.079)
N3: (197.637,145.364,-3.697)
N4: (196.716,145.681,-1.619)
C6: (198.925,143.110,-2.776)
C5: (198.155,143.798,-1.927)
O3': (203.437,142.298,-4.244)
Image (generated by PyMOL):