Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQE:A539:A18
Extra
PDB:
ATOM 1 O3' U A 538 154.870 105.656 -9.411 1.00 37.84 O
ATOM 2 P U A 539 156.084 105.406 -10.454 1.00 33.26 P
ATOM 3 OP1 U A 539 157.262 105.357 -9.546 1.00 33.85 O
ATOM 4 OP2 U A 539 156.103 106.318 -11.605 1.00 31.75 O
ATOM 5 O5' U A 539 155.848 103.932 -10.955 1.00 33.01 O
ATOM 6 C5' U A 539 155.962 103.590 -12.343 1.00 31.24 C
ATOM 7 C4' U A 539 156.257 102.117 -12.485 1.00 30.47 C
ATOM 8 O4' U A 539 157.612 101.831 -12.043 1.00 29.48 O
ATOM 9 C3' U A 539 155.347 101.194 -11.687 1.00 30.15 C
ATOM 10 O3' U A 539 155.109 100.022 -12.449 1.00 29.17 O
ATOM 11 C2' U A 539 156.202 100.845 -10.478 1.00 30.14 C
ATOM 12 O2' U A 539 155.874 99.617 -9.859 1.00 31.81 O
ATOM 13 C1' U A 539 157.584 100.782 -11.116 1.00 29.82 C
ATOM 14 N1 U A 539 158.686 100.942 -10.164 1.00 32.41 N
ATOM 15 C2 U A 539 159.446 99.820 -9.878 1.00 34.45 C
ATOM 16 O2 U A 539 159.292 98.741 -10.452 1.00 37.98 O
ATOM 17 N3 U A 539 160.392 100.000 -8.904 1.00 33.33 N
ATOM 18 C4 U A 539 160.656 101.165 -8.218 1.00 35.00 C
ATOM 19 O4 U A 539 161.412 101.135 -7.248 1.00 38.81 O
ATOM 20 C5 U A 539 159.870 102.285 -8.619 1.00 33.27 C
ATOM 21 C6 U A 539 158.938 102.139 -9.553 1.00 32.28 C
ATOM 22 P C A 540 153.795 99.155 -12.183 1.00 28.50 P
ATOM 23 OP1 C A 540 153.330 99.516 -10.805 1.00 32.22 O
ATOM 24 OP2 C A 540 154.087 97.752 -12.499 1.00 29.92 O
ATOM 25 O5' C A 540 152.717 99.731 -13.187 1.00 27.51 O
TER
ATOM 1 O3' G B 17 163.624 97.054 -9.793 1.00 25.85 O
ATOM 2 P C B 18 162.877 96.598 -8.439 1.00 26.41 P
ATOM 3 OP1 C B 18 162.581 95.152 -8.607 1.00 26.80 O
ATOM 4 OP2 C B 18 161.793 97.564 -8.114 1.00 25.53 O
ATOM 5 O5' C B 18 164.006 96.680 -7.337 1.00 26.31 O
ATOM 6 C5' C B 18 165.123 95.788 -7.397 1.00 25.73 C
ATOM 7 C4' C B 18 166.086 96.092 -6.296 1.00 25.61 C
ATOM 8 O4' C B 18 166.651 97.407 -6.503 1.00 26.95 O
ATOM 9 C3' C B 18 165.466 96.167 -4.915 1.00 25.91 C
ATOM 10 O3' C B 18 165.319 94.919 -4.345 1.00 25.73 O
ATOM 11 C2' C B 18 166.453 97.034 -4.160 1.00 26.61 C
ATOM 12 O2' C B 18 167.583 96.285 -3.779 1.00 26.59 O
ATOM 13 C1' C B 18 166.861 98.034 -5.245 1.00 28.02 C
ATOM 14 N1 C B 18 166.062 99.275 -5.191 1.00 28.56 N
ATOM 15 C2 C B 18 166.377 100.236 -4.230 1.00 29.46 C
ATOM 16 O2 C B 18 167.321 100.024 -3.455 1.00 31.98 O
ATOM 17 N3 C B 18 165.649 101.370 -4.165 1.00 30.57 N
ATOM 18 C4 C B 18 164.638 101.563 -5.011 1.00 30.43 C
ATOM 19 N4 C B 18 163.944 102.699 -4.904 1.00 30.75 N
ATOM 20 C5 C B 18 164.295 100.604 -6.003 1.00 29.82 C
ATOM 21 C6 C B 18 165.027 99.486 -6.059 1.00 29.32 C
ATOM 22 P U B 19 164.034 94.632 -3.440 1.00 27.97 P
ATOM 23 OP1 U B 19 164.020 93.194 -3.055 1.00 27.73 O
ATOM 24 OP2 U B 19 162.859 95.231 -4.125 1.00 28.35 O
ATOM 25 O5' U B 19 164.345 95.452 -2.129 1.00 28.43 O
TER
ATOM 2 P U A 539 156.084 105.406 -10.454 1.00 33.26 P
ATOM 3 OP1 U A 539 157.262 105.357 -9.546 1.00 33.85 O
ATOM 4 OP2 U A 539 156.103 106.318 -11.605 1.00 31.75 O
ATOM 5 O5' U A 539 155.848 103.932 -10.955 1.00 33.01 O
ATOM 6 C5' U A 539 155.962 103.590 -12.343 1.00 31.24 C
ATOM 7 C4' U A 539 156.257 102.117 -12.485 1.00 30.47 C
ATOM 8 O4' U A 539 157.612 101.831 -12.043 1.00 29.48 O
ATOM 9 C3' U A 539 155.347 101.194 -11.687 1.00 30.15 C
ATOM 10 O3' U A 539 155.109 100.022 -12.449 1.00 29.17 O
ATOM 11 C2' U A 539 156.202 100.845 -10.478 1.00 30.14 C
ATOM 12 O2' U A 539 155.874 99.617 -9.859 1.00 31.81 O
ATOM 13 C1' U A 539 157.584 100.782 -11.116 1.00 29.82 C
ATOM 14 N1 U A 539 158.686 100.942 -10.164 1.00 32.41 N
ATOM 15 C2 U A 539 159.446 99.820 -9.878 1.00 34.45 C
ATOM 16 O2 U A 539 159.292 98.741 -10.452 1.00 37.98 O
ATOM 17 N3 U A 539 160.392 100.000 -8.904 1.00 33.33 N
ATOM 18 C4 U A 539 160.656 101.165 -8.218 1.00 35.00 C
ATOM 19 O4 U A 539 161.412 101.135 -7.248 1.00 38.81 O
ATOM 20 C5 U A 539 159.870 102.285 -8.619 1.00 33.27 C
ATOM 21 C6 U A 539 158.938 102.139 -9.553 1.00 32.28 C
ATOM 22 P C A 540 153.795 99.155 -12.183 1.00 28.50 P
ATOM 23 OP1 C A 540 153.330 99.516 -10.805 1.00 32.22 O
ATOM 24 OP2 C A 540 154.087 97.752 -12.499 1.00 29.92 O
ATOM 25 O5' C A 540 152.717 99.731 -13.187 1.00 27.51 O
TER
ATOM 1 O3' G B 17 163.624 97.054 -9.793 1.00 25.85 O
ATOM 2 P C B 18 162.877 96.598 -8.439 1.00 26.41 P
ATOM 3 OP1 C B 18 162.581 95.152 -8.607 1.00 26.80 O
ATOM 4 OP2 C B 18 161.793 97.564 -8.114 1.00 25.53 O
ATOM 5 O5' C B 18 164.006 96.680 -7.337 1.00 26.31 O
ATOM 6 C5' C B 18 165.123 95.788 -7.397 1.00 25.73 C
ATOM 7 C4' C B 18 166.086 96.092 -6.296 1.00 25.61 C
ATOM 8 O4' C B 18 166.651 97.407 -6.503 1.00 26.95 O
ATOM 9 C3' C B 18 165.466 96.167 -4.915 1.00 25.91 C
ATOM 10 O3' C B 18 165.319 94.919 -4.345 1.00 25.73 O
ATOM 11 C2' C B 18 166.453 97.034 -4.160 1.00 26.61 C
ATOM 12 O2' C B 18 167.583 96.285 -3.779 1.00 26.59 O
ATOM 13 C1' C B 18 166.861 98.034 -5.245 1.00 28.02 C
ATOM 14 N1 C B 18 166.062 99.275 -5.191 1.00 28.56 N
ATOM 15 C2 C B 18 166.377 100.236 -4.230 1.00 29.46 C
ATOM 16 O2 C B 18 167.321 100.024 -3.455 1.00 31.98 O
ATOM 17 N3 C B 18 165.649 101.370 -4.165 1.00 30.57 N
ATOM 18 C4 C B 18 164.638 101.563 -5.011 1.00 30.43 C
ATOM 19 N4 C B 18 163.944 102.699 -4.904 1.00 30.75 N
ATOM 20 C5 C B 18 164.295 100.604 -6.003 1.00 29.82 C
ATOM 21 C6 C B 18 165.027 99.486 -6.059 1.00 29.32 C
ATOM 22 P U B 19 164.034 94.632 -3.440 1.00 27.97 P
ATOM 23 OP1 U B 19 164.020 93.194 -3.055 1.00 27.73 O
ATOM 24 OP2 U B 19 162.859 95.231 -4.125 1.00 28.35 O
ATOM 25 O5' U B 19 164.345 95.452 -2.129 1.00 28.43 O
TER
Atoms:
C4: (160.656,101.165,-8.218)
N3: (160.392,100.000,-8.904)
OP1: (157.262,105.357,-9.546)
OP2: (156.103,106.318,-11.605)
C2: (159.446,99.820,-9.878)
C1': (157.584,100.782,-11.116)
C3': (155.347,101.194,-11.687)
O5': (155.848,103.932,-10.955)
O4': (157.612,101.831,-12.043)
C5': (155.962,103.590,-12.343)
P: (156.084,105.406,-10.454)
C4': (156.257,102.117,-12.485)
C2': (156.202,100.845,-10.478)
O2': (155.874,99.617,-9.859)
N1: (158.686,100.942,-10.164)
O4: (161.412,101.135,-7.248)
O2: (159.292,98.741,-10.452)
C6: (158.938,102.139,-9.553)
C5: (159.870,102.285,-8.619)
O3': (155.109,100.022,-12.449)
N3: (160.392,100.000,-8.904)
OP1: (157.262,105.357,-9.546)
OP2: (156.103,106.318,-11.605)
C2: (159.446,99.820,-9.878)
C1': (157.584,100.782,-11.116)
C3': (155.347,101.194,-11.687)
O5': (155.848,103.932,-10.955)
O4': (157.612,101.831,-12.043)
C5': (155.962,103.590,-12.343)
P: (156.084,105.406,-10.454)
C4': (156.257,102.117,-12.485)
C2': (156.202,100.845,-10.478)
O2': (155.874,99.617,-9.859)
N1: (158.686,100.942,-10.164)
O4: (161.412,101.135,-7.248)
O2: (159.292,98.741,-10.452)
C6: (158.938,102.139,-9.553)
C5: (159.870,102.285,-8.619)
O3': (155.109,100.022,-12.449)
C2: (166.377,100.236,-4.230)
OP1: (162.581,95.152,-8.607)
OP2: (161.793,97.564,-8.114)
C4: (164.638,101.563,-5.011)
O5': (164.006,96.680,-7.337)
C3': (165.466,96.167,-4.915)
C1': (166.861,98.034,-5.245)
O4': (166.651,97.407,-6.503)
C5': (165.123,95.788,-7.397)
P: (162.877,96.598,-8.439)
O2: (167.321,100.024,-3.455)
C4': (166.086,96.092,-6.296)
C2': (166.453,97.034,-4.160)
O2': (167.583,96.285,-3.779)
N1: (166.062,99.275,-5.191)
N3: (165.649,101.370,-4.165)
N4: (163.944,102.699,-4.904)
C6: (165.027,99.486,-6.059)
C5: (164.295,100.604,-6.003)
O3': (165.319,94.919,-4.345)
OP1: (162.581,95.152,-8.607)
OP2: (161.793,97.564,-8.114)
C4: (164.638,101.563,-5.011)
O5': (164.006,96.680,-7.337)
C3': (165.466,96.167,-4.915)
C1': (166.861,98.034,-5.245)
O4': (166.651,97.407,-6.503)
C5': (165.123,95.788,-7.397)
P: (162.877,96.598,-8.439)
O2: (167.321,100.024,-3.455)
C4': (166.086,96.092,-6.296)
C2': (166.453,97.034,-4.160)
O2': (167.583,96.285,-3.779)
N1: (166.062,99.275,-5.191)
N3: (165.649,101.370,-4.165)
N4: (163.944,102.699,-4.904)
C6: (165.027,99.486,-6.059)
C5: (164.295,100.604,-6.003)
O3': (165.319,94.919,-4.345)
Image (generated by PyMOL):