Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A1042:A1086
Extra
PDB:
ATOM 1 P U A1042 210.152 131.415 -4.910 1.00 79.46 P
ATOM 2 OP1 U A1042 209.059 130.463 -4.502 1.00 80.07 O
ATOM 3 OP2 U A1042 211.135 131.028 -5.938 1.00 80.51 O
ATOM 4 O5' U A1042 209.527 132.786 -5.338 1.00 78.27 O
ATOM 5 C5' U A1042 208.862 133.616 -4.384 1.00 78.40 C
ATOM 6 C4' U A1042 208.025 134.626 -5.107 1.00 79.11 C
ATOM 7 O4' U A1042 207.032 135.194 -4.222 1.00 79.73 O
ATOM 8 C3' U A1042 208.784 135.774 -5.734 1.00 80.17 C
ATOM 9 O3' U A1042 208.742 135.729 -7.179 1.00 80.92 O
ATOM 10 C2' U A1042 208.400 136.991 -4.879 1.00 80.07 C
ATOM 11 O2' U A1042 208.364 138.263 -5.493 1.00 80.17 O
ATOM 12 C1' U A1042 207.037 136.599 -4.321 1.00 80.25 C
ATOM 13 N1 U A1042 206.812 137.144 -2.972 1.00 81.39 N
ATOM 14 C2 U A1042 205.844 138.129 -2.813 1.00 82.01 C
ATOM 15 O2 U A1042 205.176 138.573 -3.736 1.00 81.06 O
ATOM 16 N3 U A1042 205.691 138.582 -1.527 1.00 83.61 N
ATOM 17 C4 U A1042 206.388 138.172 -0.407 1.00 83.97 C
ATOM 18 O4 U A1042 206.129 138.680 0.685 1.00 84.28 O
ATOM 19 C5 U A1042 207.369 137.159 -0.651 1.00 83.22 C
ATOM 20 C6 U A1042 207.541 136.689 -1.891 1.00 82.25 C
ATOM 21 P C A1043 207.518 136.373 -7.997 1.00 83.22 P
ATOM 22 OP1 C A1043 208.046 136.729 -9.357 1.00 83.33 O
ATOM 23 OP2 C A1043 206.806 137.400 -7.196 1.00 84.44 O
ATOM 24 O5' C A1043 206.538 135.147 -8.179 1.00 82.93 O
TER
ATOM 1 O3' G B1085 200.705 139.392 0.175 1.00 82.93 O
ATOM 2 P C B1086 201.673 140.646 -0.146 1.00 83.47 P
ATOM 3 OP1 C B1086 203.081 140.128 -0.122 1.00 82.68 O
ATOM 4 OP2 C B1086 201.280 141.772 0.751 1.00 84.46 O
ATOM 5 O5' C B1086 201.296 141.076 -1.643 1.00 80.71 O
ATOM 6 C5' C B1086 201.803 140.349 -2.763 1.00 80.01 C
ATOM 7 C4' C B1086 201.757 141.203 -3.997 1.00 79.88 C
ATOM 8 O4' C B1086 200.384 141.526 -4.302 1.00 79.38 O
ATOM 9 C3' C B1086 202.450 142.544 -3.880 1.00 80.79 C
ATOM 10 O3' C B1086 203.835 142.431 -4.129 1.00 82.17 O
ATOM 11 C2' C B1086 201.723 143.394 -4.918 1.00 80.79 C
ATOM 12 O2' C B1086 202.205 143.255 -6.239 1.00 80.26 O
ATOM 13 C1' C B1086 200.304 142.837 -4.832 1.00 80.78 C
ATOM 14 N1 C B1086 199.432 143.640 -3.955 1.00 83.02 N
ATOM 15 C2 C B1086 198.830 144.814 -4.468 1.00 83.47 C
ATOM 16 O2 C B1086 199.053 145.151 -5.643 1.00 83.59 O
ATOM 17 N3 C B1086 198.028 145.546 -3.663 1.00 84.06 N
ATOM 18 C4 C B1086 197.814 145.159 -2.401 1.00 84.26 C
ATOM 19 N4 C B1086 197.014 145.915 -1.643 1.00 84.82 N
ATOM 20 C5 C B1086 198.411 143.980 -1.857 1.00 84.24 C
ATOM 21 C6 C B1086 199.204 143.259 -2.659 1.00 83.39 C
ATOM 22 P A B1087 204.865 143.347 -3.311 1.00 82.14 P
ATOM 23 OP1 A B1087 206.211 143.142 -3.922 1.00 82.71 O
ATOM 24 OP2 A B1087 204.669 143.061 -1.878 1.00 83.47 O
ATOM 25 O5' A B1087 204.376 144.834 -3.619 1.00 82.31 O
TER
ATOM 2 OP1 U A1042 209.059 130.463 -4.502 1.00 80.07 O
ATOM 3 OP2 U A1042 211.135 131.028 -5.938 1.00 80.51 O
ATOM 4 O5' U A1042 209.527 132.786 -5.338 1.00 78.27 O
ATOM 5 C5' U A1042 208.862 133.616 -4.384 1.00 78.40 C
ATOM 6 C4' U A1042 208.025 134.626 -5.107 1.00 79.11 C
ATOM 7 O4' U A1042 207.032 135.194 -4.222 1.00 79.73 O
ATOM 8 C3' U A1042 208.784 135.774 -5.734 1.00 80.17 C
ATOM 9 O3' U A1042 208.742 135.729 -7.179 1.00 80.92 O
ATOM 10 C2' U A1042 208.400 136.991 -4.879 1.00 80.07 C
ATOM 11 O2' U A1042 208.364 138.263 -5.493 1.00 80.17 O
ATOM 12 C1' U A1042 207.037 136.599 -4.321 1.00 80.25 C
ATOM 13 N1 U A1042 206.812 137.144 -2.972 1.00 81.39 N
ATOM 14 C2 U A1042 205.844 138.129 -2.813 1.00 82.01 C
ATOM 15 O2 U A1042 205.176 138.573 -3.736 1.00 81.06 O
ATOM 16 N3 U A1042 205.691 138.582 -1.527 1.00 83.61 N
ATOM 17 C4 U A1042 206.388 138.172 -0.407 1.00 83.97 C
ATOM 18 O4 U A1042 206.129 138.680 0.685 1.00 84.28 O
ATOM 19 C5 U A1042 207.369 137.159 -0.651 1.00 83.22 C
ATOM 20 C6 U A1042 207.541 136.689 -1.891 1.00 82.25 C
ATOM 21 P C A1043 207.518 136.373 -7.997 1.00 83.22 P
ATOM 22 OP1 C A1043 208.046 136.729 -9.357 1.00 83.33 O
ATOM 23 OP2 C A1043 206.806 137.400 -7.196 1.00 84.44 O
ATOM 24 O5' C A1043 206.538 135.147 -8.179 1.00 82.93 O
TER
ATOM 1 O3' G B1085 200.705 139.392 0.175 1.00 82.93 O
ATOM 2 P C B1086 201.673 140.646 -0.146 1.00 83.47 P
ATOM 3 OP1 C B1086 203.081 140.128 -0.122 1.00 82.68 O
ATOM 4 OP2 C B1086 201.280 141.772 0.751 1.00 84.46 O
ATOM 5 O5' C B1086 201.296 141.076 -1.643 1.00 80.71 O
ATOM 6 C5' C B1086 201.803 140.349 -2.763 1.00 80.01 C
ATOM 7 C4' C B1086 201.757 141.203 -3.997 1.00 79.88 C
ATOM 8 O4' C B1086 200.384 141.526 -4.302 1.00 79.38 O
ATOM 9 C3' C B1086 202.450 142.544 -3.880 1.00 80.79 C
ATOM 10 O3' C B1086 203.835 142.431 -4.129 1.00 82.17 O
ATOM 11 C2' C B1086 201.723 143.394 -4.918 1.00 80.79 C
ATOM 12 O2' C B1086 202.205 143.255 -6.239 1.00 80.26 O
ATOM 13 C1' C B1086 200.304 142.837 -4.832 1.00 80.78 C
ATOM 14 N1 C B1086 199.432 143.640 -3.955 1.00 83.02 N
ATOM 15 C2 C B1086 198.830 144.814 -4.468 1.00 83.47 C
ATOM 16 O2 C B1086 199.053 145.151 -5.643 1.00 83.59 O
ATOM 17 N3 C B1086 198.028 145.546 -3.663 1.00 84.06 N
ATOM 18 C4 C B1086 197.814 145.159 -2.401 1.00 84.26 C
ATOM 19 N4 C B1086 197.014 145.915 -1.643 1.00 84.82 N
ATOM 20 C5 C B1086 198.411 143.980 -1.857 1.00 84.24 C
ATOM 21 C6 C B1086 199.204 143.259 -2.659 1.00 83.39 C
ATOM 22 P A B1087 204.865 143.347 -3.311 1.00 82.14 P
ATOM 23 OP1 A B1087 206.211 143.142 -3.922 1.00 82.71 O
ATOM 24 OP2 A B1087 204.669 143.061 -1.878 1.00 83.47 O
ATOM 25 O5' A B1087 204.376 144.834 -3.619 1.00 82.31 O
TER
Atoms:
C4: (206.388,138.172,-0.407)
N3: (205.691,138.582,-1.527)
OP1: (209.059,130.463,-4.502)
OP2: (211.135,131.028,-5.938)
C2: (205.844,138.129,-2.813)
C1': (207.037,136.599,-4.321)
C3': (208.784,135.774,-5.734)
O5': (209.527,132.786,-5.338)
O4': (207.032,135.194,-4.222)
C5': (208.862,133.616,-4.384)
P: (210.152,131.415,-4.910)
C4': (208.025,134.626,-5.107)
C2': (208.400,136.991,-4.879)
O2': (208.364,138.263,-5.493)
N1: (206.812,137.144,-2.972)
O4: (206.129,138.680,0.685)
O2: (205.176,138.573,-3.736)
C6: (207.541,136.689,-1.891)
C5: (207.369,137.159,-0.651)
O3': (208.742,135.729,-7.179)
N3: (205.691,138.582,-1.527)
OP1: (209.059,130.463,-4.502)
OP2: (211.135,131.028,-5.938)
C2: (205.844,138.129,-2.813)
C1': (207.037,136.599,-4.321)
C3': (208.784,135.774,-5.734)
O5': (209.527,132.786,-5.338)
O4': (207.032,135.194,-4.222)
C5': (208.862,133.616,-4.384)
P: (210.152,131.415,-4.910)
C4': (208.025,134.626,-5.107)
C2': (208.400,136.991,-4.879)
O2': (208.364,138.263,-5.493)
N1: (206.812,137.144,-2.972)
O4: (206.129,138.680,0.685)
O2: (205.176,138.573,-3.736)
C6: (207.541,136.689,-1.891)
C5: (207.369,137.159,-0.651)
O3': (208.742,135.729,-7.179)
C2: (198.830,144.814,-4.468)
OP1: (203.081,140.128,-0.122)
OP2: (201.280,141.772,0.751)
C4: (197.814,145.159,-2.401)
O5': (201.296,141.076,-1.643)
C3': (202.450,142.544,-3.880)
C1': (200.304,142.837,-4.832)
O4': (200.384,141.526,-4.302)
C5': (201.803,140.349,-2.763)
P: (201.673,140.646,-0.146)
O2: (199.053,145.151,-5.643)
C4': (201.757,141.203,-3.997)
C2': (201.723,143.394,-4.918)
O2': (202.205,143.255,-6.239)
N1: (199.432,143.640,-3.955)
N3: (198.028,145.546,-3.663)
N4: (197.014,145.915,-1.643)
C6: (199.204,143.259,-2.659)
C5: (198.411,143.980,-1.857)
O3': (203.835,142.431,-4.129)
OP1: (203.081,140.128,-0.122)
OP2: (201.280,141.772,0.751)
C4: (197.814,145.159,-2.401)
O5': (201.296,141.076,-1.643)
C3': (202.450,142.544,-3.880)
C1': (200.304,142.837,-4.832)
O4': (200.384,141.526,-4.302)
C5': (201.803,140.349,-2.763)
P: (201.673,140.646,-0.146)
O2: (199.053,145.151,-5.643)
C4': (201.757,141.203,-3.997)
C2': (201.723,143.394,-4.918)
O2': (202.205,143.255,-6.239)
N1: (199.432,143.640,-3.955)
N3: (198.028,145.546,-3.663)
N4: (197.014,145.915,-1.643)
C6: (199.204,143.259,-2.659)
C5: (198.411,143.980,-1.857)
O3': (203.835,142.431,-4.129)
Image (generated by PyMOL):