Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2108:A2109
Extra
PDB:
ATOM 1 O3' A A2107 -133.056 22.136 46.232 1.00117.29 O
ATOM 2 P G A2108 -132.464 23.491 46.906 1.00142.77 P
ATOM 3 OP1 G A2108 -133.377 24.609 46.524 1.00142.77 O
ATOM 4 OP2 G A2108 -131.023 23.581 46.521 1.00142.77 O
ATOM 5 O5' G A2108 -132.595 23.192 48.476 1.00142.77 O
ATOM 6 C5' G A2108 -132.461 24.231 49.444 1.00142.77 C
ATOM 7 C4' G A2108 -131.637 23.783 50.633 1.00142.77 C
ATOM 8 O4' G A2108 -131.227 22.399 50.453 1.00142.77 O
ATOM 9 C3' G A2108 -130.335 24.546 50.864 1.00142.77 C
ATOM 10 O3' G A2108 -130.525 25.744 51.609 1.00142.77 O
ATOM 11 C2' G A2108 -129.453 23.521 51.575 1.00142.77 C
ATOM 12 O2' G A2108 -129.728 23.496 52.968 1.00142.77 O
ATOM 13 C1' G A2108 -129.924 22.201 50.955 1.00142.77 C
ATOM 14 N9 G A2108 -129.051 21.745 49.844 1.00141.73 N
ATOM 15 C8 G A2108 -128.955 22.299 48.584 1.00141.73 C
ATOM 16 N7 G A2108 -128.110 21.679 47.800 1.00141.73 N
ATOM 17 C5 G A2108 -127.604 20.636 48.576 1.00141.73 C
ATOM 18 C6 G A2108 -126.641 19.620 48.265 1.00141.73 C
ATOM 19 O6 G A2108 -126.018 19.430 47.208 1.00141.73 O
ATOM 20 N1 G A2108 -126.424 18.765 49.349 1.00141.73 N
ATOM 21 C2 G A2108 -127.043 18.864 50.575 1.00141.73 C
ATOM 22 N2 G A2108 -126.699 17.945 51.495 1.00141.73 N
ATOM 23 N3 G A2108 -127.937 19.803 50.873 1.00141.73 N
ATOM 24 C4 G A2108 -128.179 20.658 49.841 1.00141.73 C
ATOM 25 P G A2109 -130.470 27.190 50.889 1.00125.77 P
ATOM 26 OP1 G A2109 -131.879 27.628 50.674 1.00125.77 O
ATOM 27 OP2 G A2109 -129.569 27.063 49.709 1.00125.77 O
ATOM 28 O5' G A2109 -129.779 28.108 51.999 1.00125.77 O
TER
ATOM 1 O3' G B2108 -130.525 25.744 51.609 1.00142.77 O
ATOM 2 P G B2109 -130.470 27.190 50.889 1.00125.77 P
ATOM 3 OP1 G B2109 -131.879 27.628 50.674 1.00125.77 O
ATOM 4 OP2 G B2109 -129.569 27.063 49.709 1.00125.77 O
ATOM 5 O5' G B2109 -129.779 28.108 51.999 1.00125.77 O
ATOM 6 C5' G B2109 -128.405 27.939 52.315 1.00125.77 C
ATOM 7 C4' G B2109 -128.092 28.330 53.740 1.00125.77 C
ATOM 8 O4' G B2109 -129.202 27.994 54.613 1.00125.77 O
ATOM 9 C3' G B2109 -126.899 27.623 54.370 1.00125.77 C
ATOM 10 O3' G B2109 -125.647 28.188 53.977 1.00125.77 O
ATOM 11 C2' G B2109 -127.185 27.732 55.875 1.00125.77 C
ATOM 12 O2' G B2109 -126.717 28.971 56.399 1.00125.77 O
ATOM 13 C1' G B2109 -128.722 27.730 55.922 1.00125.77 C
ATOM 14 N9 G B2109 -129.299 26.446 56.418 1.00124.04 N
ATOM 15 C8 G B2109 -130.078 25.571 55.686 1.00124.04 C
ATOM 16 N7 G B2109 -130.496 24.533 56.358 1.00124.04 N
ATOM 17 C5 G B2109 -129.985 24.723 57.632 1.00124.04 C
ATOM 18 C6 G B2109 -130.120 23.905 58.789 1.00124.04 C
ATOM 19 O6 G B2109 -130.736 22.835 58.899 1.00124.04 O
ATOM 20 N1 G B2109 -129.452 24.439 59.890 1.00124.04 N
ATOM 21 C2 G B2109 -128.746 25.615 59.881 1.00124.04 C
ATOM 22 N2 G B2109 -128.179 25.948 61.053 1.00124.04 N
ATOM 23 N3 G B2109 -128.615 26.390 58.803 1.00124.04 N
ATOM 24 C4 G B2109 -129.254 25.899 57.705 1.00124.04 C
ATOM 25 P A B2110 -124.916 27.725 52.605 1.00119.98 P
ATOM 26 OP1 A B2110 -124.221 28.924 52.045 1.00119.98 O
ATOM 27 OP2 A B2110 -125.940 27.036 51.768 1.00119.98 O
ATOM 28 O5' A B2110 -123.835 26.668 53.116 1.00119.98 O
TER
ATOM 2 P G A2108 -132.464 23.491 46.906 1.00142.77 P
ATOM 3 OP1 G A2108 -133.377 24.609 46.524 1.00142.77 O
ATOM 4 OP2 G A2108 -131.023 23.581 46.521 1.00142.77 O
ATOM 5 O5' G A2108 -132.595 23.192 48.476 1.00142.77 O
ATOM 6 C5' G A2108 -132.461 24.231 49.444 1.00142.77 C
ATOM 7 C4' G A2108 -131.637 23.783 50.633 1.00142.77 C
ATOM 8 O4' G A2108 -131.227 22.399 50.453 1.00142.77 O
ATOM 9 C3' G A2108 -130.335 24.546 50.864 1.00142.77 C
ATOM 10 O3' G A2108 -130.525 25.744 51.609 1.00142.77 O
ATOM 11 C2' G A2108 -129.453 23.521 51.575 1.00142.77 C
ATOM 12 O2' G A2108 -129.728 23.496 52.968 1.00142.77 O
ATOM 13 C1' G A2108 -129.924 22.201 50.955 1.00142.77 C
ATOM 14 N9 G A2108 -129.051 21.745 49.844 1.00141.73 N
ATOM 15 C8 G A2108 -128.955 22.299 48.584 1.00141.73 C
ATOM 16 N7 G A2108 -128.110 21.679 47.800 1.00141.73 N
ATOM 17 C5 G A2108 -127.604 20.636 48.576 1.00141.73 C
ATOM 18 C6 G A2108 -126.641 19.620 48.265 1.00141.73 C
ATOM 19 O6 G A2108 -126.018 19.430 47.208 1.00141.73 O
ATOM 20 N1 G A2108 -126.424 18.765 49.349 1.00141.73 N
ATOM 21 C2 G A2108 -127.043 18.864 50.575 1.00141.73 C
ATOM 22 N2 G A2108 -126.699 17.945 51.495 1.00141.73 N
ATOM 23 N3 G A2108 -127.937 19.803 50.873 1.00141.73 N
ATOM 24 C4 G A2108 -128.179 20.658 49.841 1.00141.73 C
ATOM 25 P G A2109 -130.470 27.190 50.889 1.00125.77 P
ATOM 26 OP1 G A2109 -131.879 27.628 50.674 1.00125.77 O
ATOM 27 OP2 G A2109 -129.569 27.063 49.709 1.00125.77 O
ATOM 28 O5' G A2109 -129.779 28.108 51.999 1.00125.77 O
TER
ATOM 1 O3' G B2108 -130.525 25.744 51.609 1.00142.77 O
ATOM 2 P G B2109 -130.470 27.190 50.889 1.00125.77 P
ATOM 3 OP1 G B2109 -131.879 27.628 50.674 1.00125.77 O
ATOM 4 OP2 G B2109 -129.569 27.063 49.709 1.00125.77 O
ATOM 5 O5' G B2109 -129.779 28.108 51.999 1.00125.77 O
ATOM 6 C5' G B2109 -128.405 27.939 52.315 1.00125.77 C
ATOM 7 C4' G B2109 -128.092 28.330 53.740 1.00125.77 C
ATOM 8 O4' G B2109 -129.202 27.994 54.613 1.00125.77 O
ATOM 9 C3' G B2109 -126.899 27.623 54.370 1.00125.77 C
ATOM 10 O3' G B2109 -125.647 28.188 53.977 1.00125.77 O
ATOM 11 C2' G B2109 -127.185 27.732 55.875 1.00125.77 C
ATOM 12 O2' G B2109 -126.717 28.971 56.399 1.00125.77 O
ATOM 13 C1' G B2109 -128.722 27.730 55.922 1.00125.77 C
ATOM 14 N9 G B2109 -129.299 26.446 56.418 1.00124.04 N
ATOM 15 C8 G B2109 -130.078 25.571 55.686 1.00124.04 C
ATOM 16 N7 G B2109 -130.496 24.533 56.358 1.00124.04 N
ATOM 17 C5 G B2109 -129.985 24.723 57.632 1.00124.04 C
ATOM 18 C6 G B2109 -130.120 23.905 58.789 1.00124.04 C
ATOM 19 O6 G B2109 -130.736 22.835 58.899 1.00124.04 O
ATOM 20 N1 G B2109 -129.452 24.439 59.890 1.00124.04 N
ATOM 21 C2 G B2109 -128.746 25.615 59.881 1.00124.04 C
ATOM 22 N2 G B2109 -128.179 25.948 61.053 1.00124.04 N
ATOM 23 N3 G B2109 -128.615 26.390 58.803 1.00124.04 N
ATOM 24 C4 G B2109 -129.254 25.899 57.705 1.00124.04 C
ATOM 25 P A B2110 -124.916 27.725 52.605 1.00119.98 P
ATOM 26 OP1 A B2110 -124.221 28.924 52.045 1.00119.98 O
ATOM 27 OP2 A B2110 -125.940 27.036 51.768 1.00119.98 O
ATOM 28 O5' A B2110 -123.835 26.668 53.116 1.00119.98 O
TER
Atoms:
OP1: (-133.377,24.609,46.524)
OP2: (-131.023,23.581,46.521)
C3': (-130.335,24.546,50.864)
C1': (-129.924,22.201,50.955)
C5': (-132.461,24.231,49.444)
O6: (-126.018,19.430,47.208)
O4': (-131.227,22.399,50.453)
C8: (-128.955,22.299,48.584)
C2: (-127.043,18.864,50.575)
C6: (-126.641,19.620,48.265)
C5: (-127.604,20.636,48.576)
C4: (-128.179,20.658,49.841)
P: (-132.464,23.491,46.906)
C4': (-131.637,23.783,50.633)
C2': (-129.453,23.521,51.575)
O2': (-129.728,23.496,52.968)
N1: (-126.424,18.765,49.349)
N2: (-126.699,17.945,51.495)
N3: (-127.937,19.803,50.873)
N7: (-128.110,21.679,47.800)
N9: (-129.051,21.745,49.844)
O5': (-132.595,23.192,48.476)
O3': (-130.525,25.744,51.609)
OP2: (-131.023,23.581,46.521)
C3': (-130.335,24.546,50.864)
C1': (-129.924,22.201,50.955)
C5': (-132.461,24.231,49.444)
O6: (-126.018,19.430,47.208)
O4': (-131.227,22.399,50.453)
C8: (-128.955,22.299,48.584)
C2: (-127.043,18.864,50.575)
C6: (-126.641,19.620,48.265)
C5: (-127.604,20.636,48.576)
C4: (-128.179,20.658,49.841)
P: (-132.464,23.491,46.906)
C4': (-131.637,23.783,50.633)
C2': (-129.453,23.521,51.575)
O2': (-129.728,23.496,52.968)
N1: (-126.424,18.765,49.349)
N2: (-126.699,17.945,51.495)
N3: (-127.937,19.803,50.873)
N7: (-128.110,21.679,47.800)
N9: (-129.051,21.745,49.844)
O5': (-132.595,23.192,48.476)
O3': (-130.525,25.744,51.609)
OP1: (-131.879,27.628,50.674)
OP2: (-129.569,27.063,49.709)
C3': (-126.899,27.623,54.370)
C1': (-128.722,27.730,55.922)
C5': (-128.405,27.939,52.315)
O6: (-130.736,22.835,58.899)
O4': (-129.202,27.994,54.613)
C8: (-130.078,25.571,55.686)
C2: (-128.746,25.615,59.881)
C6: (-130.120,23.905,58.789)
C5: (-129.985,24.723,57.632)
C4: (-129.254,25.899,57.705)
P: (-130.470,27.190,50.889)
C4': (-128.092,28.330,53.740)
C2': (-127.185,27.732,55.875)
O2': (-126.717,28.971,56.399)
N1: (-129.452,24.439,59.890)
N2: (-128.179,25.948,61.053)
N3: (-128.615,26.390,58.803)
N7: (-130.496,24.533,56.358)
N9: (-129.299,26.446,56.418)
O5': (-129.779,28.108,51.999)
O3': (-125.647,28.188,53.977)
OP2: (-129.569,27.063,49.709)
C3': (-126.899,27.623,54.370)
C1': (-128.722,27.730,55.922)
C5': (-128.405,27.939,52.315)
O6: (-130.736,22.835,58.899)
O4': (-129.202,27.994,54.613)
C8: (-130.078,25.571,55.686)
C2: (-128.746,25.615,59.881)
C6: (-130.120,23.905,58.789)
C5: (-129.985,24.723,57.632)
C4: (-129.254,25.899,57.705)
P: (-130.470,27.190,50.889)
C4': (-128.092,28.330,53.740)
C2': (-127.185,27.732,55.875)
O2': (-126.717,28.971,56.399)
N1: (-129.452,24.439,59.890)
N2: (-128.179,25.948,61.053)
N3: (-128.615,26.390,58.803)
N7: (-130.496,24.533,56.358)
N9: (-129.299,26.446,56.418)
O5': (-129.779,28.108,51.999)
O3': (-125.647,28.188,53.977)
Image (generated by PyMOL):