Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A539:A18
Extra
PDB:
ATOM 1 O3' U A 538 155.128 105.732 -9.262 1.00 64.89 O
ATOM 2 P U A 539 156.380 105.624 -10.280 1.00 61.32 P
ATOM 3 OP1 U A 539 157.550 105.743 -9.373 1.00 62.53 O
ATOM 4 OP2 U A 539 156.309 106.521 -11.448 1.00 61.27 O
ATOM 5 O5' U A 539 156.335 104.112 -10.757 1.00 60.09 O
ATOM 6 C5' U A 539 156.245 103.775 -12.149 1.00 58.37 C
ATOM 7 C4' U A 539 156.487 102.298 -12.346 1.00 56.75 C
ATOM 8 O4' U A 539 157.834 101.961 -11.928 1.00 56.52 O
ATOM 9 C3' U A 539 155.561 101.351 -11.596 1.00 56.19 C
ATOM 10 O3' U A 539 155.318 100.247 -12.428 1.00 55.34 O
ATOM 11 C2' U A 539 156.406 100.901 -10.411 1.00 56.62 C
ATOM 12 O2' U A 539 156.096 99.611 -9.927 1.00 56.10 O
ATOM 13 C1' U A 539 157.792 100.875 -11.035 1.00 58.22 C
ATOM 14 N1 U A 539 158.876 101.006 -10.055 1.00 61.88 N
ATOM 15 C2 U A 539 159.557 99.848 -9.688 1.00 64.79 C
ATOM 16 O2 U A 539 159.293 98.726 -10.151 1.00 68.88 O
ATOM 17 N3 U A 539 160.551 100.040 -8.759 1.00 63.42 N
ATOM 18 C4 U A 539 160.918 101.233 -8.175 1.00 63.40 C
ATOM 19 O4 U A 539 161.818 101.246 -7.337 1.00 65.56 O
ATOM 20 C5 U A 539 160.173 102.367 -8.610 1.00 63.05 C
ATOM 21 C6 U A 539 159.205 102.220 -9.513 1.00 62.18 C
ATOM 22 P C A 540 154.080 99.284 -12.126 1.00 55.91 P
ATOM 23 OP1 C A 540 153.641 99.605 -10.727 1.00 58.58 O
ATOM 24 OP2 C A 540 154.434 97.897 -12.502 1.00 54.57 O
ATOM 25 O5' C A 540 152.941 99.814 -13.065 1.00 55.89 O
TER
ATOM 1 O3' G B 17 163.892 97.223 -9.665 1.00 53.11 O
ATOM 2 P C B 18 163.139 96.792 -8.306 1.00 52.79 P
ATOM 3 OP1 C B 18 162.797 95.347 -8.470 1.00 51.30 O
ATOM 4 OP2 C B 18 162.066 97.781 -8.007 1.00 50.93 O
ATOM 5 O5' C B 18 164.278 96.862 -7.196 1.00 50.31 O
ATOM 6 C5' C B 18 165.344 95.914 -7.226 1.00 50.58 C
ATOM 7 C4' C B 18 166.346 96.202 -6.155 1.00 50.79 C
ATOM 8 O4' C B 18 166.934 97.505 -6.374 1.00 53.64 O
ATOM 9 C3' C B 18 165.805 96.285 -4.751 1.00 52.05 C
ATOM 10 O3' C B 18 165.612 95.048 -4.171 1.00 52.71 O
ATOM 11 C2' C B 18 166.863 97.105 -4.045 1.00 52.94 C
ATOM 12 O2' C B 18 168.003 96.324 -3.756 1.00 53.41 O
ATOM 13 C1' C B 18 167.220 98.115 -5.130 1.00 53.25 C
ATOM 14 N1 C B 18 166.413 99.344 -5.029 1.00 54.01 N
ATOM 15 C2 C B 18 166.791 100.336 -4.109 1.00 54.39 C
ATOM 16 O2 C B 18 167.768 100.135 -3.359 1.00 56.04 O
ATOM 17 N3 C B 18 166.085 101.483 -4.056 1.00 53.92 N
ATOM 18 C4 C B 18 165.038 101.659 -4.858 1.00 53.57 C
ATOM 19 N4 C B 18 164.396 102.827 -4.794 1.00 55.78 N
ATOM 20 C5 C B 18 164.611 100.656 -5.773 1.00 53.25 C
ATOM 21 C6 C B 18 165.319 99.527 -5.827 1.00 52.29 C
ATOM 22 P U B 19 164.324 94.841 -3.246 1.00 54.46 P
ATOM 23 OP1 U B 19 164.247 93.413 -2.813 1.00 52.16 O
ATOM 24 OP2 U B 19 163.169 95.468 -3.948 1.00 53.13 O
ATOM 25 O5' U B 19 164.696 95.716 -1.987 1.00 54.53 O
TER
ATOM 2 P U A 539 156.380 105.624 -10.280 1.00 61.32 P
ATOM 3 OP1 U A 539 157.550 105.743 -9.373 1.00 62.53 O
ATOM 4 OP2 U A 539 156.309 106.521 -11.448 1.00 61.27 O
ATOM 5 O5' U A 539 156.335 104.112 -10.757 1.00 60.09 O
ATOM 6 C5' U A 539 156.245 103.775 -12.149 1.00 58.37 C
ATOM 7 C4' U A 539 156.487 102.298 -12.346 1.00 56.75 C
ATOM 8 O4' U A 539 157.834 101.961 -11.928 1.00 56.52 O
ATOM 9 C3' U A 539 155.561 101.351 -11.596 1.00 56.19 C
ATOM 10 O3' U A 539 155.318 100.247 -12.428 1.00 55.34 O
ATOM 11 C2' U A 539 156.406 100.901 -10.411 1.00 56.62 C
ATOM 12 O2' U A 539 156.096 99.611 -9.927 1.00 56.10 O
ATOM 13 C1' U A 539 157.792 100.875 -11.035 1.00 58.22 C
ATOM 14 N1 U A 539 158.876 101.006 -10.055 1.00 61.88 N
ATOM 15 C2 U A 539 159.557 99.848 -9.688 1.00 64.79 C
ATOM 16 O2 U A 539 159.293 98.726 -10.151 1.00 68.88 O
ATOM 17 N3 U A 539 160.551 100.040 -8.759 1.00 63.42 N
ATOM 18 C4 U A 539 160.918 101.233 -8.175 1.00 63.40 C
ATOM 19 O4 U A 539 161.818 101.246 -7.337 1.00 65.56 O
ATOM 20 C5 U A 539 160.173 102.367 -8.610 1.00 63.05 C
ATOM 21 C6 U A 539 159.205 102.220 -9.513 1.00 62.18 C
ATOM 22 P C A 540 154.080 99.284 -12.126 1.00 55.91 P
ATOM 23 OP1 C A 540 153.641 99.605 -10.727 1.00 58.58 O
ATOM 24 OP2 C A 540 154.434 97.897 -12.502 1.00 54.57 O
ATOM 25 O5' C A 540 152.941 99.814 -13.065 1.00 55.89 O
TER
ATOM 1 O3' G B 17 163.892 97.223 -9.665 1.00 53.11 O
ATOM 2 P C B 18 163.139 96.792 -8.306 1.00 52.79 P
ATOM 3 OP1 C B 18 162.797 95.347 -8.470 1.00 51.30 O
ATOM 4 OP2 C B 18 162.066 97.781 -8.007 1.00 50.93 O
ATOM 5 O5' C B 18 164.278 96.862 -7.196 1.00 50.31 O
ATOM 6 C5' C B 18 165.344 95.914 -7.226 1.00 50.58 C
ATOM 7 C4' C B 18 166.346 96.202 -6.155 1.00 50.79 C
ATOM 8 O4' C B 18 166.934 97.505 -6.374 1.00 53.64 O
ATOM 9 C3' C B 18 165.805 96.285 -4.751 1.00 52.05 C
ATOM 10 O3' C B 18 165.612 95.048 -4.171 1.00 52.71 O
ATOM 11 C2' C B 18 166.863 97.105 -4.045 1.00 52.94 C
ATOM 12 O2' C B 18 168.003 96.324 -3.756 1.00 53.41 O
ATOM 13 C1' C B 18 167.220 98.115 -5.130 1.00 53.25 C
ATOM 14 N1 C B 18 166.413 99.344 -5.029 1.00 54.01 N
ATOM 15 C2 C B 18 166.791 100.336 -4.109 1.00 54.39 C
ATOM 16 O2 C B 18 167.768 100.135 -3.359 1.00 56.04 O
ATOM 17 N3 C B 18 166.085 101.483 -4.056 1.00 53.92 N
ATOM 18 C4 C B 18 165.038 101.659 -4.858 1.00 53.57 C
ATOM 19 N4 C B 18 164.396 102.827 -4.794 1.00 55.78 N
ATOM 20 C5 C B 18 164.611 100.656 -5.773 1.00 53.25 C
ATOM 21 C6 C B 18 165.319 99.527 -5.827 1.00 52.29 C
ATOM 22 P U B 19 164.324 94.841 -3.246 1.00 54.46 P
ATOM 23 OP1 U B 19 164.247 93.413 -2.813 1.00 52.16 O
ATOM 24 OP2 U B 19 163.169 95.468 -3.948 1.00 53.13 O
ATOM 25 O5' U B 19 164.696 95.716 -1.987 1.00 54.53 O
TER
Atoms:
C4: (160.918,101.233,-8.175)
N3: (160.551,100.040,-8.759)
OP1: (157.550,105.743,-9.373)
OP2: (156.309,106.521,-11.448)
C2: (159.557,99.848,-9.688)
C1': (157.792,100.875,-11.035)
C3': (155.561,101.351,-11.596)
O5': (156.335,104.112,-10.757)
O4': (157.834,101.961,-11.928)
C5': (156.245,103.775,-12.149)
P: (156.380,105.624,-10.280)
C4': (156.487,102.298,-12.346)
C2': (156.406,100.901,-10.411)
O2': (156.096,99.611,-9.927)
N1: (158.876,101.006,-10.055)
O4: (161.818,101.246,-7.337)
O2: (159.293,98.726,-10.151)
C6: (159.205,102.220,-9.513)
C5: (160.173,102.367,-8.610)
O3': (155.318,100.247,-12.428)
N3: (160.551,100.040,-8.759)
OP1: (157.550,105.743,-9.373)
OP2: (156.309,106.521,-11.448)
C2: (159.557,99.848,-9.688)
C1': (157.792,100.875,-11.035)
C3': (155.561,101.351,-11.596)
O5': (156.335,104.112,-10.757)
O4': (157.834,101.961,-11.928)
C5': (156.245,103.775,-12.149)
P: (156.380,105.624,-10.280)
C4': (156.487,102.298,-12.346)
C2': (156.406,100.901,-10.411)
O2': (156.096,99.611,-9.927)
N1: (158.876,101.006,-10.055)
O4: (161.818,101.246,-7.337)
O2: (159.293,98.726,-10.151)
C6: (159.205,102.220,-9.513)
C5: (160.173,102.367,-8.610)
O3': (155.318,100.247,-12.428)
C2: (166.791,100.336,-4.109)
OP1: (162.797,95.347,-8.470)
OP2: (162.066,97.781,-8.007)
C4: (165.038,101.659,-4.858)
O5': (164.278,96.862,-7.196)
C3': (165.805,96.285,-4.751)
C1': (167.220,98.115,-5.130)
O4': (166.934,97.505,-6.374)
C5': (165.344,95.914,-7.226)
P: (163.139,96.792,-8.306)
O2: (167.768,100.135,-3.359)
C4': (166.346,96.202,-6.155)
C2': (166.863,97.105,-4.045)
O2': (168.003,96.324,-3.756)
N1: (166.413,99.344,-5.029)
N3: (166.085,101.483,-4.056)
N4: (164.396,102.827,-4.794)
C6: (165.319,99.527,-5.827)
C5: (164.611,100.656,-5.773)
O3': (165.612,95.048,-4.171)
OP1: (162.797,95.347,-8.470)
OP2: (162.066,97.781,-8.007)
C4: (165.038,101.659,-4.858)
O5': (164.278,96.862,-7.196)
C3': (165.805,96.285,-4.751)
C1': (167.220,98.115,-5.130)
O4': (166.934,97.505,-6.374)
C5': (165.344,95.914,-7.226)
P: (163.139,96.792,-8.306)
O2: (167.768,100.135,-3.359)
C4': (166.346,96.202,-6.155)
C2': (166.863,97.105,-4.045)
O2': (168.003,96.324,-3.756)
N1: (166.413,99.344,-5.029)
N3: (166.085,101.483,-4.056)
N4: (164.396,102.827,-4.794)
C6: (165.319,99.527,-5.827)
C5: (164.611,100.656,-5.773)
O3': (165.612,95.048,-4.171)
Image (generated by PyMOL):