ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8O:A889:A887

Extra

PDB:
ATOM 1 O3' G A 888 -25.953 96.788 94.984 1.00 12.46 O
ATOM 2 P U A 889 -25.446 97.739 96.170 1.00 8.22 P
ATOM 3 OP1 U A 889 -25.845 99.107 95.812 1.00 8.22 O
ATOM 4 OP2 U A 889 -24.026 97.453 96.387 1.00 8.22 O
ATOM 5 O5' U A 889 -26.292 97.242 97.408 1.00 8.22 O
ATOM 6 C5' U A 889 -27.631 97.665 97.571 1.00 8.22 C
ATOM 7 C4' U A 889 -28.492 96.575 98.154 1.00 8.22 C
ATOM 8 O4' U A 889 -28.696 95.518 97.172 1.00 8.22 O
ATOM 9 C3' U A 889 -27.925 95.834 99.354 1.00 8.22 C
ATOM 10 O3' U A 889 -28.014 96.565 100.566 1.00 8.22 O
ATOM 11 C2' U A 889 -28.753 94.568 99.344 1.00 8.22 C
ATOM 12 O2' U A 889 -30.079 94.841 99.783 1.00 8.22 O
ATOM 13 C1' U A 889 -28.794 94.273 97.842 1.00 8.22 C
ATOM 14 N1 U A 889 -27.664 93.399 97.408 1.00 8.44 N
ATOM 15 C2 U A 889 -27.574 92.160 97.986 1.00 8.44 C
ATOM 16 O2 U A 889 -28.345 91.759 98.825 1.00 8.44 O
ATOM 17 N3 U A 889 -26.548 91.380 97.561 1.00 8.44 N
ATOM 18 C4 U A 889 -25.598 91.674 96.619 1.00 8.44 C
ATOM 19 O4 U A 889 -24.727 90.822 96.365 1.00 8.44 O
ATOM 20 C5 U A 889 -25.750 92.975 96.044 1.00 8.44 C
ATOM 21 C6 U A 889 -26.753 93.761 96.451 1.00 8.44 C
ATOM 22 P A A 890 -26.678 96.881 101.411 1.00 5.78 P
ATOM 23 OP1 A A 890 -26.917 98.163 102.141 1.00 5.78 O
ATOM 24 OP2 A A 890 -25.543 96.794 100.464 1.00 5.78 O
ATOM 25 O5' A A 890 -26.609 95.673 102.445 1.00 5.78 O
TER

ATOM 1 O3' G B 886 -34.130 92.727 96.505 1.00 14.75 O
ATOM 2 P A B 887 -32.804 93.554 96.900 1.00 22.22 P
ATOM 3 OP1 A B 887 -31.915 92.648 97.680 1.00 22.22 O
ATOM 4 OP2 A B 887 -33.257 94.822 97.511 1.00 22.22 O
ATOM 5 O5' A B 887 -32.151 93.842 95.498 1.00 22.22 O
ATOM 6 C5' A B 887 -31.368 94.996 95.297 1.00 22.22 C
ATOM 7 C4' A B 887 -30.244 94.724 94.345 1.00 22.22 C
ATOM 8 O4' A B 887 -29.457 93.607 94.840 1.00 22.22 O
ATOM 9 C3' A B 887 -30.672 94.341 92.931 1.00 22.22 C
ATOM 10 O3' A B 887 -29.717 94.828 92.015 1.00 22.22 O
ATOM 11 C2' A B 887 -30.574 92.833 92.948 1.00 22.22 C
ATOM 12 O2' A B 887 -30.419 92.257 91.666 1.00 22.22 O
ATOM 13 C1' A B 887 -29.327 92.655 93.813 1.00 22.22 C
ATOM 14 N9 A B 887 -29.180 91.337 94.422 1.00 22.27 N
ATOM 15 C8 A B 887 -29.982 90.687 95.312 1.00 22.27 C
ATOM 16 N7 A B 887 -29.520 89.502 95.624 1.00 22.27 N
ATOM 17 C5 A B 887 -28.337 89.371 94.905 1.00 22.27 C
ATOM 18 C6 A B 887 -27.362 88.348 94.799 1.00 22.27 C
ATOM 19 N6 A B 887 -27.385 87.176 95.447 1.00 22.27 N
ATOM 20 N1 A B 887 -26.315 88.568 93.981 1.00 22.27 N
ATOM 21 C2 A B 887 -26.266 89.732 93.326 1.00 22.27 C
ATOM 22 N3 A B 887 -27.107 90.765 93.341 1.00 22.27 N
ATOM 23 C4 A B 887 -28.127 90.509 94.165 1.00 22.27 C
ATOM 24 P G B 888 -29.625 96.382 91.692 1.00 12.46 P
ATOM 25 OP1 G B 888 -29.479 97.098 92.974 1.00 12.46 O
ATOM 26 OP2 G B 888 -30.776 96.711 90.810 1.00 12.46 O
ATOM 27 O5' G B 888 -28.277 96.457 90.866 1.00 12.46 O
TER

Atoms:
C4: (-25.598,91.674,96.619)
N3: (-26.548,91.380,97.561)
OP1: (-25.845,99.107,95.812)
OP2: (-24.026,97.453,96.387)
C2: (-27.574,92.160,97.986)
C1': (-28.794,94.273,97.842)
C3': (-27.925,95.834,99.354)
O5': (-26.292,97.242,97.408)
O4': (-28.696,95.518,97.172)
C5': (-27.631,97.665,97.571)
P: (-25.446,97.739,96.170)
C4': (-28.492,96.575,98.154)
C2': (-28.753,94.568,99.344)
O2': (-30.079,94.841,99.783)
N1: (-27.664,93.399,97.408)
O4: (-24.727,90.822,96.365)
O2: (-28.345,91.759,98.825)
C6: (-26.753,93.761,96.451)
C5: (-25.750,92.975,96.044)
O3': (-28.014,96.565,100.566)
OP1: (-31.915,92.648,97.680)
OP2: (-33.257,94.822,97.511)
C3': (-30.672,94.341,92.931)
C1': (-29.327,92.655,93.813)
C5': (-31.368,94.996,95.297)
O4': (-29.457,93.607,94.840)
C8: (-29.982,90.687,95.312)
O2': (-30.419,92.257,91.666)
C6: (-27.362,88.348,94.799)
C5: (-28.337,89.371,94.905)
C4: (-28.127,90.509,94.165)
P: (-32.804,93.554,96.900)
C4': (-30.244,94.724,94.345)
C2': (-30.574,92.833,92.948)
C2: (-26.266,89.732,93.326)
N1: (-26.315,88.568,93.981)
N3: (-27.107,90.765,93.341)
N6: (-27.385,87.176,95.447)
N7: (-29.520,89.502,95.624)
N9: (-29.180,91.337,94.422)
O5': (-32.151,93.842,95.498)
O3': (-29.717,94.828,92.015)
Image (generated by PyMOL):
PyMOL image
show in jmol