Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:147:145
Extra
PDB:
ATOM 1 O3' A A 46 47.195 -27.607 104.419 1.00 36.94 O
ATOM 2 P U A 47 47.880 -26.637 105.452 1.00 36.02 P
ATOM 3 OP1 U A 47 48.994 -27.391 106.082 1.00 36.33 O
ATOM 4 OP2 U A 47 46.820 -26.096 106.303 1.00 36.12 O
ATOM 5 O5' U A 47 48.439 -25.493 104.518 1.00 35.71 O
ATOM 6 C5' U A 47 49.660 -25.634 103.808 1.00 35.63 C
ATOM 7 C4' U A 47 49.761 -24.591 102.725 1.00 35.28 C
ATOM 8 O4' U A 47 48.877 -24.960 101.630 1.00 35.01 O
ATOM 9 C3' U A 47 49.283 -23.202 103.128 1.00 35.23 C
ATOM 10 O3' U A 47 50.277 -22.421 103.706 1.00 35.37 O
ATOM 11 C2' U A 47 48.738 -22.614 101.854 1.00 34.85 C
ATOM 12 O2' U A 47 49.799 -22.135 101.048 1.00 34.70 O
ATOM 13 C1' U A 47 48.134 -23.844 101.199 1.00 34.77 C
ATOM 14 N1 U A 47 46.751 -24.042 101.612 1.00 34.80 N
ATOM 15 C2 U A 47 45.852 -23.166 101.051 1.00 34.56 C
ATOM 16 O2 U A 47 46.257 -22.348 100.272 1.00 34.34 O
ATOM 17 N3 U A 47 44.495 -23.248 101.352 1.00 34.58 N
ATOM 18 C4 U A 47 44.005 -24.159 102.195 1.00 34.82 C
ATOM 19 O4 U A 47 42.834 -24.077 102.365 1.00 34.81 O
ATOM 20 C5 U A 47 44.958 -25.063 102.759 1.00 35.07 C
ATOM 21 C6 U A 47 46.282 -24.988 102.478 1.00 35.06 C
ATOM 22 P A A 48 49.855 -21.318 104.753 1.00 38.76 P
ATOM 23 OP1 A A 48 51.073 -20.873 105.456 1.00 38.99 O
ATOM 24 OP2 A A 48 48.762 -21.891 105.572 1.00 38.94 O
ATOM 25 O5' A A 48 49.266 -20.172 103.811 1.00 38.42 O
TER
ATOM 1 O3' C B 44 48.539 -25.438 95.570 1.00 36.27 O
ATOM 2 P A B 45 48.882 -25.146 97.092 1.00 32.89 P
ATOM 3 OP1 A B 45 47.772 -24.343 97.642 1.00 32.87 O
ATOM 4 OP2 A B 45 50.276 -24.564 97.148 1.00 32.94 O
ATOM 5 O5' A B 45 48.846 -26.578 97.735 1.00 33.16 O
ATOM 6 C5' A B 45 49.166 -26.733 99.093 1.00 33.48 C
ATOM 7 C4' A B 45 48.034 -27.319 99.852 1.00 33.64 C
ATOM 8 O4' A B 45 46.952 -26.344 99.968 1.00 33.50 O
ATOM 9 C3' A B 45 47.421 -28.571 99.236 1.00 33.61 C
ATOM 10 O3' A B 45 47.134 -29.481 100.275 1.00 33.92 O
ATOM 11 C2' A B 45 46.126 -28.022 98.645 1.00 33.36 C
ATOM 12 O2' A B 45 45.089 -28.954 98.409 1.00 33.37 O
ATOM 13 C1' A B 45 45.751 -27.017 99.704 1.00 33.46 C
ATOM 14 N9 A B 45 44.709 -26.072 99.287 1.00 33.23 N
ATOM 15 C8 A B 45 44.787 -25.049 98.433 1.00 32.96 C
ATOM 16 N7 A B 45 43.652 -24.448 98.282 1.00 32.83 N
ATOM 17 C5 A B 45 42.770 -25.155 99.040 1.00 33.02 C
ATOM 18 C6 A B 45 41.391 -24.996 99.248 1.00 33.01 C
ATOM 19 N6 A B 45 40.703 -24.008 98.688 1.00 32.79 N
ATOM 20 N1 A B 45 40.781 -25.869 100.088 1.00 33.25 N
ATOM 21 C2 A B 45 41.547 -26.814 100.639 1.00 33.48 C
ATOM 22 N3 A B 45 42.832 -27.050 100.467 1.00 33.51 N
ATOM 23 C4 A B 45 43.397 -26.172 99.657 1.00 33.27 C
ATOM 24 P A B 46 48.022 -30.810 100.433 1.00 36.45 P
ATOM 25 OP1 A B 46 49.427 -30.470 100.206 1.00 36.44 O
ATOM 26 OP2 A B 46 47.432 -31.766 99.594 1.00 36.36 O
ATOM 27 O5' A B 46 47.832 -31.245 101.960 1.00 36.83 O
TER
ATOM 2 P U A 47 47.880 -26.637 105.452 1.00 36.02 P
ATOM 3 OP1 U A 47 48.994 -27.391 106.082 1.00 36.33 O
ATOM 4 OP2 U A 47 46.820 -26.096 106.303 1.00 36.12 O
ATOM 5 O5' U A 47 48.439 -25.493 104.518 1.00 35.71 O
ATOM 6 C5' U A 47 49.660 -25.634 103.808 1.00 35.63 C
ATOM 7 C4' U A 47 49.761 -24.591 102.725 1.00 35.28 C
ATOM 8 O4' U A 47 48.877 -24.960 101.630 1.00 35.01 O
ATOM 9 C3' U A 47 49.283 -23.202 103.128 1.00 35.23 C
ATOM 10 O3' U A 47 50.277 -22.421 103.706 1.00 35.37 O
ATOM 11 C2' U A 47 48.738 -22.614 101.854 1.00 34.85 C
ATOM 12 O2' U A 47 49.799 -22.135 101.048 1.00 34.70 O
ATOM 13 C1' U A 47 48.134 -23.844 101.199 1.00 34.77 C
ATOM 14 N1 U A 47 46.751 -24.042 101.612 1.00 34.80 N
ATOM 15 C2 U A 47 45.852 -23.166 101.051 1.00 34.56 C
ATOM 16 O2 U A 47 46.257 -22.348 100.272 1.00 34.34 O
ATOM 17 N3 U A 47 44.495 -23.248 101.352 1.00 34.58 N
ATOM 18 C4 U A 47 44.005 -24.159 102.195 1.00 34.82 C
ATOM 19 O4 U A 47 42.834 -24.077 102.365 1.00 34.81 O
ATOM 20 C5 U A 47 44.958 -25.063 102.759 1.00 35.07 C
ATOM 21 C6 U A 47 46.282 -24.988 102.478 1.00 35.06 C
ATOM 22 P A A 48 49.855 -21.318 104.753 1.00 38.76 P
ATOM 23 OP1 A A 48 51.073 -20.873 105.456 1.00 38.99 O
ATOM 24 OP2 A A 48 48.762 -21.891 105.572 1.00 38.94 O
ATOM 25 O5' A A 48 49.266 -20.172 103.811 1.00 38.42 O
TER
ATOM 1 O3' C B 44 48.539 -25.438 95.570 1.00 36.27 O
ATOM 2 P A B 45 48.882 -25.146 97.092 1.00 32.89 P
ATOM 3 OP1 A B 45 47.772 -24.343 97.642 1.00 32.87 O
ATOM 4 OP2 A B 45 50.276 -24.564 97.148 1.00 32.94 O
ATOM 5 O5' A B 45 48.846 -26.578 97.735 1.00 33.16 O
ATOM 6 C5' A B 45 49.166 -26.733 99.093 1.00 33.48 C
ATOM 7 C4' A B 45 48.034 -27.319 99.852 1.00 33.64 C
ATOM 8 O4' A B 45 46.952 -26.344 99.968 1.00 33.50 O
ATOM 9 C3' A B 45 47.421 -28.571 99.236 1.00 33.61 C
ATOM 10 O3' A B 45 47.134 -29.481 100.275 1.00 33.92 O
ATOM 11 C2' A B 45 46.126 -28.022 98.645 1.00 33.36 C
ATOM 12 O2' A B 45 45.089 -28.954 98.409 1.00 33.37 O
ATOM 13 C1' A B 45 45.751 -27.017 99.704 1.00 33.46 C
ATOM 14 N9 A B 45 44.709 -26.072 99.287 1.00 33.23 N
ATOM 15 C8 A B 45 44.787 -25.049 98.433 1.00 32.96 C
ATOM 16 N7 A B 45 43.652 -24.448 98.282 1.00 32.83 N
ATOM 17 C5 A B 45 42.770 -25.155 99.040 1.00 33.02 C
ATOM 18 C6 A B 45 41.391 -24.996 99.248 1.00 33.01 C
ATOM 19 N6 A B 45 40.703 -24.008 98.688 1.00 32.79 N
ATOM 20 N1 A B 45 40.781 -25.869 100.088 1.00 33.25 N
ATOM 21 C2 A B 45 41.547 -26.814 100.639 1.00 33.48 C
ATOM 22 N3 A B 45 42.832 -27.050 100.467 1.00 33.51 N
ATOM 23 C4 A B 45 43.397 -26.172 99.657 1.00 33.27 C
ATOM 24 P A B 46 48.022 -30.810 100.433 1.00 36.45 P
ATOM 25 OP1 A B 46 49.427 -30.470 100.206 1.00 36.44 O
ATOM 26 OP2 A B 46 47.432 -31.766 99.594 1.00 36.36 O
ATOM 27 O5' A B 46 47.832 -31.245 101.960 1.00 36.83 O
TER
Atoms:
C4: (44.005,-24.159,102.195)
N3: (44.495,-23.248,101.352)
OP1: (48.994,-27.391,106.082)
OP2: (46.820,-26.096,106.303)
C2: (45.852,-23.166,101.051)
C1': (48.134,-23.844,101.199)
C3': (49.283,-23.202,103.128)
O5': (48.439,-25.493,104.518)
O4': (48.877,-24.960,101.630)
C5': (49.660,-25.634,103.808)
P: (47.880,-26.637,105.452)
C4': (49.761,-24.591,102.725)
C2': (48.738,-22.614,101.854)
O2': (49.799,-22.135,101.048)
N1: (46.751,-24.042,101.612)
O4: (42.834,-24.077,102.365)
O2: (46.257,-22.348,100.272)
C6: (46.282,-24.988,102.478)
C5: (44.958,-25.063,102.759)
O3': (50.277,-22.421,103.706)
N3: (44.495,-23.248,101.352)
OP1: (48.994,-27.391,106.082)
OP2: (46.820,-26.096,106.303)
C2: (45.852,-23.166,101.051)
C1': (48.134,-23.844,101.199)
C3': (49.283,-23.202,103.128)
O5': (48.439,-25.493,104.518)
O4': (48.877,-24.960,101.630)
C5': (49.660,-25.634,103.808)
P: (47.880,-26.637,105.452)
C4': (49.761,-24.591,102.725)
C2': (48.738,-22.614,101.854)
O2': (49.799,-22.135,101.048)
N1: (46.751,-24.042,101.612)
O4: (42.834,-24.077,102.365)
O2: (46.257,-22.348,100.272)
C6: (46.282,-24.988,102.478)
C5: (44.958,-25.063,102.759)
O3': (50.277,-22.421,103.706)
OP1: (47.772,-24.343,97.642)
OP2: (50.276,-24.564,97.148)
C3': (47.421,-28.571,99.236)
C1': (45.751,-27.017,99.704)
C5': (49.166,-26.733,99.093)
O4': (46.952,-26.344,99.968)
C8: (44.787,-25.049,98.433)
O2': (45.089,-28.954,98.409)
C6: (41.391,-24.996,99.248)
C5: (42.770,-25.155,99.040)
C4: (43.397,-26.172,99.657)
P: (48.882,-25.146,97.092)
C4': (48.034,-27.319,99.852)
C2': (46.126,-28.022,98.645)
C2: (41.547,-26.814,100.639)
N1: (40.781,-25.869,100.088)
N3: (42.832,-27.050,100.467)
N6: (40.703,-24.008,98.688)
N7: (43.652,-24.448,98.282)
N9: (44.709,-26.072,99.287)
O5': (48.846,-26.578,97.735)
O3': (47.134,-29.481,100.275)
OP2: (50.276,-24.564,97.148)
C3': (47.421,-28.571,99.236)
C1': (45.751,-27.017,99.704)
C5': (49.166,-26.733,99.093)
O4': (46.952,-26.344,99.968)
C8: (44.787,-25.049,98.433)
O2': (45.089,-28.954,98.409)
C6: (41.391,-24.996,99.248)
C5: (42.770,-25.155,99.040)
C4: (43.397,-26.172,99.657)
P: (48.882,-25.146,97.092)
C4': (48.034,-27.319,99.852)
C2': (46.126,-28.022,98.645)
C2: (41.547,-26.814,100.639)
N1: (40.781,-25.869,100.088)
N3: (42.832,-27.050,100.467)
N6: (40.703,-24.008,98.688)
N7: (43.652,-24.448,98.282)
N9: (44.709,-26.072,99.287)
O5': (48.846,-26.578,97.735)
O3': (47.134,-29.481,100.275)
Image (generated by PyMOL):