ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:02380:02042

Extra

PDB:
ATOM 1 O3' A A2379 59.223 122.487 95.501 1.00 43.74 O
ATOM 2 P U A2380 58.023 121.700 96.229 1.00 38.53 P
ATOM 3 OP1 U A2380 58.475 120.306 96.420 1.00 36.68 O
ATOM 4 OP2 U A2380 56.745 121.974 95.531 1.00 40.87 O
ATOM 5 O5' U A2380 57.959 122.357 97.675 1.00 39.82 O
ATOM 6 C5' U A2380 57.272 123.598 97.896 1.00 38.86 C
ATOM 7 C4' U A2380 57.540 124.101 99.293 1.00 39.31 C
ATOM 8 O4' U A2380 57.004 123.148 100.254 1.00 38.39 O
ATOM 9 C3' U A2380 59.010 124.300 99.666 1.00 39.93 C
ATOM 10 O3' U A2380 59.131 125.415 100.541 1.00 40.84 O
ATOM 11 C2' U A2380 59.341 123.012 100.415 1.00 39.38 C
ATOM 12 O2' U A2380 60.407 123.143 101.331 1.00 38.69 O
ATOM 13 C1' U A2380 58.028 122.746 101.144 1.00 37.06 C
ATOM 14 N1 U A2380 57.813 121.338 101.506 1.00 34.72 N
ATOM 15 C2 U A2380 57.585 121.047 102.841 1.00 34.88 C
ATOM 16 O2 U A2380 57.514 121.900 103.709 1.00 36.02 O
ATOM 17 N3 U A2380 57.420 119.717 103.122 1.00 33.70 N
ATOM 18 C4 U A2380 57.437 118.674 102.230 1.00 34.23 C
ATOM 19 O4 U A2380 57.238 117.532 102.639 1.00 35.59 O
ATOM 20 C5 U A2380 57.658 119.055 100.867 1.00 32.53 C
ATOM 21 C6 U A2380 57.837 120.339 100.561 1.00 33.31 C
ATOM 22 P G A2381 59.902 126.734 100.044 1.00 42.30 P
ATOM 23 OP1 G A2381 59.703 127.797 101.065 1.00 41.88 O
ATOM 24 OP2 G A2381 59.515 126.997 98.638 1.00 43.67 O
ATOM 25 O5' G A2381 61.431 126.293 100.035 1.00 38.55 O
TER

ATOM 1 O3' A B2041 48.897 126.732 100.936 1.00 30.70 O
ATOM 2 P A B2042 49.639 126.324 99.573 1.00 33.23 P
ATOM 3 OP1 A B2042 49.669 127.515 98.671 1.00 33.90 O
ATOM 4 OP2 A B2042 48.991 125.078 99.112 1.00 32.23 O
ATOM 5 O5' A B2042 51.123 125.964 100.034 1.00 31.58 O
ATOM 6 C5' A B2042 51.391 124.739 100.717 1.00 27.97 C
ATOM 7 C4' A B2042 52.445 124.938 101.776 1.00 27.36 C
ATOM 8 O4' A B2042 52.559 123.709 102.525 1.00 23.82 O
ATOM 9 C3' A B2042 53.833 125.252 101.237 1.00 28.22 C
ATOM 10 O3' A B2042 54.007 126.665 101.281 1.00 26.28 O
ATOM 11 C2' A B2042 54.776 124.546 102.212 1.00 26.89 C
ATOM 12 O2' A B2042 55.152 125.362 103.301 1.00 27.12 O
ATOM 13 C1' A B2042 53.914 123.377 102.707 1.00 25.37 C
ATOM 14 N9 A B2042 54.124 122.064 102.103 1.00 25.55 N
ATOM 15 C8 A B2042 54.437 120.902 102.764 1.00 25.23 C
ATOM 16 N7 A B2042 54.545 119.860 101.979 1.00 25.79 N
ATOM 17 C5 A B2042 54.291 120.368 100.713 1.00 26.39 C
ATOM 18 C6 A B2042 54.250 119.766 99.440 1.00 29.07 C
ATOM 19 N6 A B2042 54.471 118.461 99.221 1.00 29.44 N
ATOM 20 N1 A B2042 53.965 120.559 98.382 1.00 29.24 N
ATOM 21 C2 A B2042 53.725 121.860 98.600 1.00 28.35 C
ATOM 22 N3 A B2042 53.727 122.537 99.746 1.00 27.77 N
ATOM 23 C4 A B2042 54.026 121.726 100.775 1.00 26.45 C
ATOM 24 P G B2043 54.930 127.406 100.196 1.00 28.29 P
ATOM 25 OP1 G B2043 54.949 126.584 98.967 1.00 25.30 O
ATOM 26 OP2 G B2043 56.211 127.788 100.833 1.00 30.15 O
ATOM 27 O5' G B2043 54.118 128.749 99.922 1.00 27.48 O
TER

Atoms:
C4: (57.437,118.674,102.230)
N3: (57.420,119.717,103.122)
OP1: (58.475,120.306,96.420)
OP2: (56.745,121.974,95.531)
C2: (57.585,121.047,102.841)
C1': (58.028,122.746,101.144)
C3': (59.010,124.300,99.666)
O5': (57.959,122.357,97.675)
O4': (57.004,123.148,100.254)
C5': (57.272,123.598,97.896)
P: (58.023,121.700,96.229)
C4': (57.540,124.101,99.293)
C2': (59.341,123.012,100.415)
O2': (60.407,123.143,101.331)
N1: (57.813,121.338,101.506)
O4: (57.238,117.532,102.639)
O2: (57.514,121.900,103.709)
C6: (57.837,120.339,100.561)
C5: (57.658,119.055,100.867)
O3': (59.131,125.415,100.541)
OP1: (49.669,127.515,98.671)
OP2: (48.991,125.078,99.112)
C3': (53.833,125.252,101.237)
C1': (53.914,123.377,102.707)
C5': (51.391,124.739,100.717)
O4': (52.559,123.709,102.525)
C8: (54.437,120.902,102.764)
O2': (55.152,125.362,103.301)
C6: (54.250,119.766,99.440)
C5: (54.291,120.368,100.713)
C4: (54.026,121.726,100.775)
P: (49.639,126.324,99.573)
C4': (52.445,124.938,101.776)
C2': (54.776,124.546,102.212)
C2: (53.725,121.860,98.600)
N1: (53.965,120.559,98.382)
N3: (53.727,122.537,99.746)
N6: (54.471,118.461,99.221)
N7: (54.545,119.860,101.979)
N9: (54.124,122.064,102.103)
O5': (51.123,125.964,100.034)
O3': (54.007,126.665,101.281)
Image (generated by PyMOL):
PyMOL image
show in jmol