Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2468:A1953
Extra
PDB:
ATOM 1 O3' C A2467 102.037 120.260 97.548 1.00 38.78 O
ATOM 2 P G A2468 102.297 118.808 96.974 1.00 38.42 P
ATOM 3 OP1 G A2468 103.750 118.677 97.152 1.00 40.83 O
ATOM 4 OP2 G A2468 101.713 118.708 95.617 1.00 37.43 O
ATOM 5 O5' G A2468 101.504 117.855 97.983 1.00 39.39 O
ATOM 6 C5' G A2468 102.034 117.557 99.298 1.00 38.94 C
ATOM 7 C4' G A2468 101.129 116.602 100.058 1.00 40.73 C
ATOM 8 O4' G A2468 99.842 117.217 100.288 1.00 41.09 O
ATOM 9 C3' G A2468 100.796 115.310 99.350 1.00 42.50 C
ATOM 10 O3' G A2468 101.824 114.362 99.503 1.00 44.54 O
ATOM 11 C2' G A2468 99.482 114.891 99.993 1.00 43.07 C
ATOM 12 O2' G A2468 99.610 114.258 101.250 1.00 44.63 O
ATOM 13 C1' G A2468 98.808 116.247 100.166 1.00 44.07 C
ATOM 14 N9 G A2468 97.995 116.598 99.004 1.00 46.17 N
ATOM 15 C8 G A2468 98.382 117.391 97.945 1.00 46.98 C
ATOM 16 N7 G A2468 97.456 117.525 97.038 1.00 46.13 N
ATOM 17 C5 G A2468 96.388 116.779 97.524 1.00 46.08 C
ATOM 18 C6 G A2468 95.105 116.544 96.963 1.00 46.22 C
ATOM 19 O6 G A2468 94.637 116.980 95.904 1.00 46.44 O
ATOM 20 N1 G A2468 94.337 115.717 97.773 1.00 44.84 N
ATOM 21 C2 G A2468 94.740 115.194 98.973 1.00 45.87 C
ATOM 22 N2 G A2468 93.845 114.431 99.607 1.00 47.31 N
ATOM 23 N3 G A2468 95.930 115.406 99.514 1.00 45.57 N
ATOM 24 C4 G A2468 96.701 116.202 98.739 1.00 45.55 C
ATOM 25 P U A2469 102.136 113.364 98.299 1.00 47.36 P
ATOM 26 OP1 U A2469 103.339 112.623 98.758 1.00 48.95 O
ATOM 27 OP2 U A2469 102.181 114.117 97.013 1.00 45.11 O
ATOM 28 O5' U A2469 100.865 112.390 98.280 1.00 46.79 O
TER
ATOM 1 O3' C B1952 100.923 107.190 107.031 1.00 67.60 O
ATOM 2 P A B1953 101.415 106.911 105.516 1.00 69.30 P
ATOM 3 OP1 A B1953 100.222 106.662 104.654 1.00 69.37 O
ATOM 4 OP2 A B1953 102.539 105.933 105.522 1.00 68.64 O
ATOM 5 O5' A B1953 102.021 108.299 105.056 1.00 66.76 O
ATOM 6 C5' A B1953 102.683 108.421 103.792 1.00 64.86 C
ATOM 7 C4' A B1953 102.382 109.766 103.193 1.00 63.85 C
ATOM 8 O4' A B1953 101.017 109.786 102.684 1.00 64.00 O
ATOM 9 C3' A B1953 102.523 110.932 104.173 1.00 62.08 C
ATOM 10 O3' A B1953 103.072 112.031 103.433 1.00 61.07 O
ATOM 11 C2' A B1953 101.065 111.238 104.543 1.00 62.78 C
ATOM 12 O2' A B1953 100.819 112.592 104.900 1.00 61.48 O
ATOM 13 C1' A B1953 100.340 110.890 103.239 1.00 63.49 C
ATOM 14 N9 A B1953 98.913 110.576 103.371 1.00 63.87 N
ATOM 15 C8 A B1953 98.322 109.506 103.990 1.00 64.20 C
ATOM 16 N7 A B1953 97.015 109.511 103.916 1.00 65.61 N
ATOM 17 C5 A B1953 96.724 110.661 103.197 1.00 65.85 C
ATOM 18 C6 A B1953 95.507 111.230 102.763 1.00 67.68 C
ATOM 19 N6 A B1953 94.306 110.684 102.990 1.00 68.90 N
ATOM 20 N1 A B1953 95.569 112.392 102.074 1.00 67.55 N
ATOM 21 C2 A B1953 96.769 112.928 101.841 1.00 66.94 C
ATOM 22 N3 A B1953 97.975 112.484 102.186 1.00 65.24 N
ATOM 23 C4 A B1953 97.882 111.333 102.867 1.00 64.57 C
ATOM 24 P U B1954 104.406 112.786 103.935 1.00 59.10 P
ATOM 25 OP1 U B1954 105.604 112.098 103.362 1.00 59.07 O
ATOM 26 OP2 U B1954 104.348 113.060 105.387 1.00 60.63 O
ATOM 27 O5' U B1954 104.260 114.179 103.204 1.00 57.14 O
TER
ATOM 2 P G A2468 102.297 118.808 96.974 1.00 38.42 P
ATOM 3 OP1 G A2468 103.750 118.677 97.152 1.00 40.83 O
ATOM 4 OP2 G A2468 101.713 118.708 95.617 1.00 37.43 O
ATOM 5 O5' G A2468 101.504 117.855 97.983 1.00 39.39 O
ATOM 6 C5' G A2468 102.034 117.557 99.298 1.00 38.94 C
ATOM 7 C4' G A2468 101.129 116.602 100.058 1.00 40.73 C
ATOM 8 O4' G A2468 99.842 117.217 100.288 1.00 41.09 O
ATOM 9 C3' G A2468 100.796 115.310 99.350 1.00 42.50 C
ATOM 10 O3' G A2468 101.824 114.362 99.503 1.00 44.54 O
ATOM 11 C2' G A2468 99.482 114.891 99.993 1.00 43.07 C
ATOM 12 O2' G A2468 99.610 114.258 101.250 1.00 44.63 O
ATOM 13 C1' G A2468 98.808 116.247 100.166 1.00 44.07 C
ATOM 14 N9 G A2468 97.995 116.598 99.004 1.00 46.17 N
ATOM 15 C8 G A2468 98.382 117.391 97.945 1.00 46.98 C
ATOM 16 N7 G A2468 97.456 117.525 97.038 1.00 46.13 N
ATOM 17 C5 G A2468 96.388 116.779 97.524 1.00 46.08 C
ATOM 18 C6 G A2468 95.105 116.544 96.963 1.00 46.22 C
ATOM 19 O6 G A2468 94.637 116.980 95.904 1.00 46.44 O
ATOM 20 N1 G A2468 94.337 115.717 97.773 1.00 44.84 N
ATOM 21 C2 G A2468 94.740 115.194 98.973 1.00 45.87 C
ATOM 22 N2 G A2468 93.845 114.431 99.607 1.00 47.31 N
ATOM 23 N3 G A2468 95.930 115.406 99.514 1.00 45.57 N
ATOM 24 C4 G A2468 96.701 116.202 98.739 1.00 45.55 C
ATOM 25 P U A2469 102.136 113.364 98.299 1.00 47.36 P
ATOM 26 OP1 U A2469 103.339 112.623 98.758 1.00 48.95 O
ATOM 27 OP2 U A2469 102.181 114.117 97.013 1.00 45.11 O
ATOM 28 O5' U A2469 100.865 112.390 98.280 1.00 46.79 O
TER
ATOM 1 O3' C B1952 100.923 107.190 107.031 1.00 67.60 O
ATOM 2 P A B1953 101.415 106.911 105.516 1.00 69.30 P
ATOM 3 OP1 A B1953 100.222 106.662 104.654 1.00 69.37 O
ATOM 4 OP2 A B1953 102.539 105.933 105.522 1.00 68.64 O
ATOM 5 O5' A B1953 102.021 108.299 105.056 1.00 66.76 O
ATOM 6 C5' A B1953 102.683 108.421 103.792 1.00 64.86 C
ATOM 7 C4' A B1953 102.382 109.766 103.193 1.00 63.85 C
ATOM 8 O4' A B1953 101.017 109.786 102.684 1.00 64.00 O
ATOM 9 C3' A B1953 102.523 110.932 104.173 1.00 62.08 C
ATOM 10 O3' A B1953 103.072 112.031 103.433 1.00 61.07 O
ATOM 11 C2' A B1953 101.065 111.238 104.543 1.00 62.78 C
ATOM 12 O2' A B1953 100.819 112.592 104.900 1.00 61.48 O
ATOM 13 C1' A B1953 100.340 110.890 103.239 1.00 63.49 C
ATOM 14 N9 A B1953 98.913 110.576 103.371 1.00 63.87 N
ATOM 15 C8 A B1953 98.322 109.506 103.990 1.00 64.20 C
ATOM 16 N7 A B1953 97.015 109.511 103.916 1.00 65.61 N
ATOM 17 C5 A B1953 96.724 110.661 103.197 1.00 65.85 C
ATOM 18 C6 A B1953 95.507 111.230 102.763 1.00 67.68 C
ATOM 19 N6 A B1953 94.306 110.684 102.990 1.00 68.90 N
ATOM 20 N1 A B1953 95.569 112.392 102.074 1.00 67.55 N
ATOM 21 C2 A B1953 96.769 112.928 101.841 1.00 66.94 C
ATOM 22 N3 A B1953 97.975 112.484 102.186 1.00 65.24 N
ATOM 23 C4 A B1953 97.882 111.333 102.867 1.00 64.57 C
ATOM 24 P U B1954 104.406 112.786 103.935 1.00 59.10 P
ATOM 25 OP1 U B1954 105.604 112.098 103.362 1.00 59.07 O
ATOM 26 OP2 U B1954 104.348 113.060 105.387 1.00 60.63 O
ATOM 27 O5' U B1954 104.260 114.179 103.204 1.00 57.14 O
TER
Atoms:
OP1: (103.750,118.677,97.152)
OP2: (101.713,118.708,95.617)
C3': (100.796,115.310,99.350)
C1': (98.808,116.247,100.166)
C5': (102.034,117.557,99.298)
O6: (94.637,116.980,95.904)
O4': (99.842,117.217,100.288)
C8: (98.382,117.391,97.945)
C2: (94.740,115.194,98.973)
C6: (95.105,116.544,96.963)
C5: (96.388,116.779,97.524)
C4: (96.701,116.202,98.739)
P: (102.297,118.808,96.974)
C4': (101.129,116.602,100.058)
C2': (99.482,114.891,99.993)
O2': (99.610,114.258,101.250)
N1: (94.337,115.717,97.773)
N2: (93.845,114.431,99.607)
N3: (95.930,115.406,99.514)
N7: (97.456,117.525,97.038)
N9: (97.995,116.598,99.004)
O5': (101.504,117.855,97.983)
O3': (101.824,114.362,99.503)
OP2: (101.713,118.708,95.617)
C3': (100.796,115.310,99.350)
C1': (98.808,116.247,100.166)
C5': (102.034,117.557,99.298)
O6: (94.637,116.980,95.904)
O4': (99.842,117.217,100.288)
C8: (98.382,117.391,97.945)
C2: (94.740,115.194,98.973)
C6: (95.105,116.544,96.963)
C5: (96.388,116.779,97.524)
C4: (96.701,116.202,98.739)
P: (102.297,118.808,96.974)
C4': (101.129,116.602,100.058)
C2': (99.482,114.891,99.993)
O2': (99.610,114.258,101.250)
N1: (94.337,115.717,97.773)
N2: (93.845,114.431,99.607)
N3: (95.930,115.406,99.514)
N7: (97.456,117.525,97.038)
N9: (97.995,116.598,99.004)
O5': (101.504,117.855,97.983)
O3': (101.824,114.362,99.503)
OP1: (100.222,106.662,104.654)
OP2: (102.539,105.933,105.522)
C3': (102.523,110.932,104.173)
C1': (100.340,110.890,103.239)
C5': (102.683,108.421,103.792)
O4': (101.017,109.786,102.684)
C8: (98.322,109.506,103.990)
O2': (100.819,112.592,104.900)
C6: (95.507,111.230,102.763)
C5: (96.724,110.661,103.197)
C4: (97.882,111.333,102.867)
P: (101.415,106.911,105.516)
C4': (102.382,109.766,103.193)
C2': (101.065,111.238,104.543)
C2: (96.769,112.928,101.841)
N1: (95.569,112.392,102.074)
N3: (97.975,112.484,102.186)
N6: (94.306,110.684,102.990)
N7: (97.015,109.511,103.916)
N9: (98.913,110.576,103.371)
O5': (102.021,108.299,105.056)
O3': (103.072,112.031,103.433)
OP2: (102.539,105.933,105.522)
C3': (102.523,110.932,104.173)
C1': (100.340,110.890,103.239)
C5': (102.683,108.421,103.792)
O4': (101.017,109.786,102.684)
C8: (98.322,109.506,103.990)
O2': (100.819,112.592,104.900)
C6: (95.507,111.230,102.763)
C5: (96.724,110.661,103.197)
C4: (97.882,111.333,102.867)
P: (101.415,106.911,105.516)
C4': (102.382,109.766,103.193)
C2': (101.065,111.238,104.543)
C2: (96.769,112.928,101.841)
N1: (95.569,112.392,102.074)
N3: (97.975,112.484,102.186)
N6: (94.306,110.684,102.990)
N7: (97.015,109.511,103.916)
N9: (98.913,110.576,103.371)
O5': (102.021,108.299,105.056)
O3': (103.072,112.031,103.433)
Image (generated by PyMOL):