ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:02018:02331

Extra

PDB:
ATOM 1 O3' C A2017 48.813 110.136 103.424 1.00 54.47 O
ATOM 2 P G A2018 47.953 110.736 104.640 1.00 57.07 P
ATOM 3 OP1 G A2018 47.063 109.670 105.187 1.00 57.70 O
ATOM 4 OP2 G A2018 47.368 112.029 104.189 1.00 57.13 O
ATOM 5 O5' G A2018 49.065 111.070 105.721 1.00 55.25 O
ATOM 6 C5' G A2018 48.785 111.001 107.122 1.00 52.00 C
ATOM 7 C4' G A2018 50.042 110.647 107.865 1.00 50.43 C
ATOM 8 O4' G A2018 50.291 109.216 107.764 1.00 50.02 O
ATOM 9 C3' G A2018 51.290 111.333 107.330 1.00 50.28 C
ATOM 10 O3' G A2018 52.135 111.686 108.408 1.00 51.34 O
ATOM 11 C2' G A2018 51.905 110.264 106.428 1.00 49.63 C
ATOM 12 O2' G A2018 53.296 110.404 106.258 1.00 52.19 O
ATOM 13 C1' G A2018 51.564 108.985 107.188 1.00 46.96 C
ATOM 14 N9 G A2018 51.466 107.786 106.353 1.00 44.34 N
ATOM 15 C8 G A2018 50.449 107.471 105.486 1.00 41.99 C
ATOM 16 N7 G A2018 50.611 106.313 104.903 1.00 40.07 N
ATOM 17 C5 G A2018 51.807 105.832 105.411 1.00 41.15 C
ATOM 18 C6 G A2018 52.489 104.610 105.154 1.00 42.38 C
ATOM 19 O6 G A2018 52.145 103.676 104.418 1.00 41.36 O
ATOM 20 N1 G A2018 53.681 104.529 105.867 1.00 41.07 N
ATOM 21 C2 G A2018 54.151 105.491 106.726 1.00 42.33 C
ATOM 22 N2 G A2018 55.333 105.239 107.300 1.00 39.41 N
ATOM 23 N3 G A2018 53.513 106.624 106.993 1.00 42.26 N
ATOM 24 C4 G A2018 52.359 106.731 106.300 1.00 42.86 C
ATOM 25 P G A2019 52.711 113.182 108.502 1.00 50.66 P
ATOM 26 OP1 G A2019 53.538 113.417 107.289 1.00 45.71 O
ATOM 27 OP2 G A2019 53.306 113.366 109.848 1.00 51.65 O
ATOM 28 O5' G A2019 51.423 114.113 108.454 1.00 46.43 O
TER

ATOM 1 O3' G B2330 56.940 114.070 111.255 1.00 40.59 O
ATOM 2 P A B2331 56.930 112.893 112.346 1.00 41.77 P
ATOM 3 OP1 A B2331 55.998 113.291 113.429 1.00 40.95 O
ATOM 4 OP2 A B2331 58.332 112.542 112.667 1.00 44.00 O
ATOM 5 O5' A B2331 56.334 111.634 111.573 1.00 45.08 O
ATOM 6 C5' A B2331 54.962 111.601 111.147 1.00 43.33 C
ATOM 7 C4' A B2331 54.692 110.333 110.379 1.00 43.06 C
ATOM 8 O4' A B2331 55.454 110.320 109.143 1.00 41.79 O
ATOM 9 C3' A B2331 55.109 109.055 111.085 1.00 41.70 C
ATOM 10 O3' A B2331 54.127 108.657 112.034 1.00 42.05 O
ATOM 11 C2' A B2331 55.251 108.080 109.922 1.00 42.89 C
ATOM 12 O2' A B2331 54.007 107.578 109.466 1.00 44.70 O
ATOM 13 C1' A B2331 55.859 108.987 108.848 1.00 42.72 C
ATOM 14 N9 A B2331 57.322 108.938 108.838 1.00 42.56 N
ATOM 15 C8 A B2331 58.197 109.871 109.341 1.00 42.87 C
ATOM 16 N7 A B2331 59.460 109.541 109.201 1.00 42.69 N
ATOM 17 C5 A B2331 59.415 108.311 108.562 1.00 40.66 C
ATOM 18 C6 A B2331 60.423 107.434 108.135 1.00 41.47 C
ATOM 19 N6 A B2331 61.724 107.672 108.295 1.00 41.68 N
ATOM 20 N1 A B2331 60.044 106.288 107.530 1.00 38.51 N
ATOM 21 C2 A B2331 58.741 106.050 107.373 1.00 38.91 C
ATOM 22 N3 A B2331 57.698 106.795 107.731 1.00 42.17 N
ATOM 23 C4 A B2331 58.106 107.927 108.329 1.00 42.12 C
ATOM 24 P G B2332 54.574 107.902 113.387 1.00 40.58 P
ATOM 25 OP1 G B2332 53.400 107.908 114.285 1.00 41.88 O
ATOM 26 OP2 G B2332 55.862 108.466 113.861 1.00 42.44 O
ATOM 27 O5' G B2332 54.870 106.408 112.930 1.00 41.47 O
TER

Atoms:
OP1: (47.063,109.670,105.187)
OP2: (47.368,112.029,104.189)
C3': (51.290,111.333,107.330)
C1': (51.564,108.985,107.188)
C5': (48.785,111.001,107.122)
O6: (52.145,103.676,104.418)
O4': (50.291,109.216,107.764)
C8: (50.449,107.471,105.486)
C2: (54.151,105.491,106.726)
C6: (52.489,104.610,105.154)
C5: (51.807,105.832,105.411)
C4: (52.359,106.731,106.300)
P: (47.953,110.736,104.640)
C4': (50.042,110.647,107.865)
C2': (51.905,110.264,106.428)
O2': (53.296,110.404,106.258)
N1: (53.681,104.529,105.867)
N2: (55.333,105.239,107.300)
N3: (53.513,106.624,106.993)
N7: (50.611,106.313,104.903)
N9: (51.466,107.786,106.353)
O5': (49.065,111.070,105.721)
O3': (52.135,111.686,108.408)
OP1: (55.998,113.291,113.429)
OP2: (58.332,112.542,112.667)
C3': (55.109,109.055,111.085)
C1': (55.859,108.987,108.848)
C5': (54.962,111.601,111.147)
O4': (55.454,110.320,109.143)
C8: (58.197,109.871,109.341)
O2': (54.007,107.578,109.466)
C6: (60.423,107.434,108.135)
C5: (59.415,108.311,108.562)
C4: (58.106,107.927,108.329)
P: (56.930,112.893,112.346)
C4': (54.692,110.333,110.379)
C2': (55.251,108.080,109.922)
C2: (58.741,106.050,107.373)
N1: (60.044,106.288,107.530)
N3: (57.698,106.795,107.731)
N6: (61.724,107.672,108.295)
N7: (59.460,109.541,109.201)
N9: (57.322,108.938,108.838)
O5': (56.334,111.634,111.573)
O3': (54.127,108.657,112.034)
Image (generated by PyMOL):
PyMOL image
show in jmol