ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:0915:02235

Extra

PDB:
ATOM 1 O3' U A 914 52.498 83.477 70.750 1.00 38.61 O
ATOM 2 P G A 915 50.971 83.110 71.090 1.00 39.94 P
ATOM 3 OP1 G A 915 50.580 82.052 70.122 1.00 37.25 O
ATOM 4 OP2 G A 915 50.148 84.347 71.213 1.00 36.59 O
ATOM 5 O5' G A 915 51.059 82.463 72.536 1.00 38.05 O
ATOM 6 C5' G A 915 49.938 82.503 73.414 1.00 37.31 C
ATOM 7 C4' G A 915 50.298 81.875 74.727 1.00 37.47 C
ATOM 8 O4' G A 915 51.474 82.536 75.270 1.00 37.39 O
ATOM 9 C3' G A 915 49.257 82.039 75.811 1.00 37.20 C
ATOM 10 O3' G A 915 48.199 81.108 75.714 1.00 39.11 O
ATOM 11 C2' G A 915 50.100 81.874 77.057 1.00 37.04 C
ATOM 12 O2' G A 915 50.491 80.527 77.215 1.00 34.83 O
ATOM 13 C1' G A 915 51.321 82.708 76.672 1.00 36.70 C
ATOM 14 N9 G A 915 51.115 84.135 76.932 1.00 35.80 N
ATOM 15 C8 G A 915 50.945 85.125 75.995 1.00 35.31 C
ATOM 16 N7 G A 915 50.779 86.307 76.520 1.00 34.60 N
ATOM 17 C5 G A 915 50.845 86.090 77.887 1.00 34.91 C
ATOM 18 C6 G A 915 50.735 87.004 78.967 1.00 35.34 C
ATOM 19 O6 G A 915 50.561 88.232 78.928 1.00 34.54 O
ATOM 20 N1 G A 915 50.851 86.359 80.193 1.00 34.25 N
ATOM 21 C2 G A 915 51.051 85.012 80.358 1.00 33.43 C
ATOM 22 N2 G A 915 51.126 84.583 81.615 1.00 33.50 N
ATOM 23 N3 G A 915 51.164 84.152 79.363 1.00 33.22 N
ATOM 24 C4 G A 915 51.050 84.754 78.162 1.00 34.73 C
ATOM 25 P A A 916 46.719 81.568 76.131 1.00 42.49 P
ATOM 26 OP1 A A 916 45.819 80.414 75.927 1.00 43.20 O
ATOM 27 OP2 A A 916 46.402 82.866 75.491 1.00 41.40 O
ATOM 28 O5' A A 916 46.833 81.869 77.687 1.00 42.22 O
TER

ATOM 1 O3' C B2234 47.092 73.549 81.397 1.00 40.71 O
ATOM 2 P A B2235 46.586 74.368 80.108 1.00 42.92 P
ATOM 3 OP1 A B2235 46.187 75.719 80.558 1.00 43.49 O
ATOM 4 OP2 A B2235 45.617 73.542 79.353 1.00 45.12 O
ATOM 5 O5' A B2235 47.879 74.518 79.198 1.00 41.36 O
ATOM 6 C5' A B2235 47.753 74.903 77.824 1.00 40.54 C
ATOM 7 C4' A B2235 48.861 75.847 77.442 1.00 40.43 C
ATOM 8 O4' A B2235 48.715 77.094 78.173 1.00 40.82 O
ATOM 9 C3' A B2235 50.270 75.358 77.730 1.00 40.57 C
ATOM 10 O3' A B2235 51.110 75.832 76.702 1.00 41.94 O
ATOM 11 C2' A B2235 50.601 76.045 79.049 1.00 40.12 C
ATOM 12 O2' A B2235 51.987 76.208 79.249 1.00 41.10 O
ATOM 13 C1' A B2235 49.917 77.391 78.850 1.00 40.14 C
ATOM 14 N9 A B2235 49.598 78.131 80.074 1.00 41.49 N
ATOM 15 C8 A B2235 48.688 77.819 81.055 1.00 42.18 C
ATOM 16 N7 A B2235 48.632 78.699 82.027 1.00 41.81 N
ATOM 17 C5 A B2235 49.571 79.655 81.663 1.00 42.66 C
ATOM 18 C6 A B2235 49.997 80.844 82.278 1.00 43.21 C
ATOM 19 N6 A B2235 49.518 81.290 83.439 1.00 43.91 N
ATOM 20 N1 A B2235 50.948 81.570 81.649 1.00 42.99 N
ATOM 21 C2 A B2235 51.434 81.120 80.490 1.00 41.10 C
ATOM 22 N3 A B2235 51.122 80.020 79.818 1.00 41.09 N
ATOM 23 C4 A B2235 50.172 79.320 80.464 1.00 41.96 C
ATOM 24 P A B2236 51.749 74.791 75.668 1.00 44.77 P
ATOM 25 OP1 A B2236 50.649 73.921 75.173 1.00 43.27 O
ATOM 26 OP2 A B2236 52.941 74.181 76.315 1.00 43.07 O
ATOM 27 O5' A B2236 52.259 75.705 74.469 1.00 45.59 O
TER

Atoms:
OP1: (50.580,82.052,70.122)
OP2: (50.148,84.347,71.213)
C3': (49.257,82.039,75.811)
C1': (51.321,82.708,76.672)
C5': (49.938,82.503,73.414)
O6: (50.561,88.232,78.928)
O4': (51.474,82.536,75.270)
C8: (50.945,85.125,75.995)
C2: (51.051,85.012,80.358)
C6: (50.735,87.004,78.967)
C5: (50.845,86.090,77.887)
C4: (51.050,84.754,78.162)
P: (50.971,83.110,71.090)
C4': (50.298,81.875,74.727)
C2': (50.100,81.874,77.057)
O2': (50.491,80.527,77.215)
N1: (50.851,86.359,80.193)
N2: (51.126,84.583,81.615)
N3: (51.164,84.152,79.363)
N7: (50.779,86.307,76.520)
N9: (51.115,84.135,76.932)
O5': (51.059,82.463,72.536)
O3': (48.199,81.108,75.714)
OP1: (46.187,75.719,80.558)
OP2: (45.617,73.542,79.353)
C3': (50.270,75.358,77.730)
C1': (49.917,77.391,78.850)
C5': (47.753,74.903,77.824)
O4': (48.715,77.094,78.173)
C8: (48.688,77.819,81.055)
O2': (51.987,76.208,79.249)
C6: (49.997,80.844,82.278)
C5: (49.571,79.655,81.663)
C4: (50.172,79.320,80.464)
P: (46.586,74.368,80.108)
C4': (48.861,75.847,77.442)
C2': (50.601,76.045,79.049)
C2: (51.434,81.120,80.490)
N1: (50.948,81.570,81.649)
N3: (51.122,80.020,79.818)
N6: (49.518,81.290,83.439)
N7: (48.632,78.699,82.027)
N9: (49.598,78.131,80.074)
O5': (47.879,74.518,79.198)
O3': (51.110,75.832,76.702)
Image (generated by PyMOL):
PyMOL image
show in jmol