ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:02468:01953

Extra

PDB:
ATOM 1 O3' C A2467 102.011 119.825 97.247 1.00 40.04 O
ATOM 2 P G A2468 102.245 118.376 96.606 1.00 41.87 P
ATOM 3 OP1 G A2468 103.704 118.110 96.697 1.00 42.63 O
ATOM 4 OP2 G A2468 101.573 118.298 95.282 1.00 40.75 O
ATOM 5 O5' G A2468 101.478 117.414 97.612 1.00 40.50 O
ATOM 6 C5' G A2468 101.957 117.221 98.952 1.00 39.22 C
ATOM 7 C4' G A2468 101.077 116.237 99.680 1.00 39.63 C
ATOM 8 O4' G A2468 99.779 116.830 99.951 1.00 40.40 O
ATOM 9 C3' G A2468 100.757 114.959 98.927 1.00 39.20 C
ATOM 10 O3' G A2468 101.792 114.006 99.061 1.00 39.73 O
ATOM 11 C2' G A2468 99.488 114.510 99.622 1.00 40.32 C
ATOM 12 O2' G A2468 99.797 113.974 100.887 1.00 39.93 O
ATOM 13 C1' G A2468 98.767 115.849 99.801 1.00 41.64 C
ATOM 14 N9 G A2468 97.979 116.198 98.619 1.00 43.59 N
ATOM 15 C8 G A2468 98.388 116.960 97.546 1.00 43.96 C
ATOM 16 N7 G A2468 97.479 117.067 96.618 1.00 44.37 N
ATOM 17 C5 G A2468 96.401 116.342 97.109 1.00 44.20 C
ATOM 18 C6 G A2468 95.131 116.089 96.538 1.00 42.51 C
ATOM 19 O6 G A2468 94.688 116.467 95.450 1.00 42.10 O
ATOM 20 N1 G A2468 94.345 115.307 97.373 1.00 41.43 N
ATOM 21 C2 G A2468 94.728 114.836 98.602 1.00 42.32 C
ATOM 22 N2 G A2468 93.825 114.108 99.269 1.00 43.24 N
ATOM 23 N3 G A2468 95.908 115.061 99.144 1.00 43.29 N
ATOM 24 C4 G A2468 96.690 115.812 98.348 1.00 42.99 C
ATOM 25 P U A2469 102.028 112.920 97.908 1.00 42.32 P
ATOM 26 OP1 U A2469 103.195 112.107 98.344 1.00 45.55 O
ATOM 27 OP2 U A2469 102.056 113.583 96.582 1.00 39.85 O
ATOM 28 O5' U A2469 100.729 112.005 97.973 1.00 43.75 O
TER

ATOM 1 O3' C B1952 100.699 106.836 106.511 1.00 60.60 O
ATOM 2 P A B1953 101.103 106.552 104.977 1.00 62.94 P
ATOM 3 OP1 A B1953 99.870 106.443 104.148 1.00 62.74 O
ATOM 4 OP2 A B1953 102.090 105.434 104.978 1.00 63.09 O
ATOM 5 O5' A B1953 101.863 107.880 104.549 1.00 61.47 O
ATOM 6 C5' A B1953 102.498 107.990 103.273 1.00 59.32 C
ATOM 7 C4' A B1953 102.272 109.368 102.710 1.00 59.26 C
ATOM 8 O4' A B1953 100.907 109.489 102.223 1.00 59.10 O
ATOM 9 C3' A B1953 102.474 110.518 103.692 1.00 58.28 C
ATOM 10 O3' A B1953 102.985 111.625 102.975 1.00 58.39 O
ATOM 11 C2' A B1953 101.048 110.827 104.140 1.00 57.76 C
ATOM 12 O2' A B1953 100.901 112.165 104.574 1.00 56.97 O
ATOM 13 C1' A B1953 100.283 110.595 102.840 1.00 58.21 C
ATOM 14 N9 A B1953 98.851 110.311 102.964 1.00 59.13 N
ATOM 15 C8 A B1953 98.230 109.231 103.541 1.00 58.38 C
ATOM 16 N7 A B1953 96.923 109.264 103.445 1.00 58.12 N
ATOM 17 C5 A B1953 96.665 110.450 102.770 1.00 58.51 C
ATOM 18 C6 A B1953 95.470 111.068 102.353 1.00 59.11 C
ATOM 19 N6 A B1953 94.252 110.566 102.574 1.00 60.66 N
ATOM 20 N1 A B1953 95.568 112.242 101.695 1.00 58.54 N
ATOM 21 C2 A B1953 96.778 112.756 101.486 1.00 57.73 C
ATOM 22 N3 A B1953 97.967 112.278 101.832 1.00 58.42 N
ATOM 23 C4 A B1953 97.841 111.107 102.476 1.00 58.33 C
ATOM 24 P U B1954 104.359 112.315 103.431 1.00 57.43 P
ATOM 25 OP1 U B1954 105.484 111.580 102.795 1.00 55.30 O
ATOM 26 OP2 U B1954 104.344 112.508 104.900 1.00 57.73 O
ATOM 27 O5' U B1954 104.223 113.769 102.808 1.00 56.05 O
TER

Atoms:
OP1: (103.704,118.110,96.697)
OP2: (101.573,118.298,95.282)
C3': (100.757,114.959,98.927)
C1': (98.767,115.849,99.801)
C5': (101.957,117.221,98.952)
O6: (94.688,116.467,95.450)
O4': (99.779,116.830,99.951)
C8: (98.388,116.960,97.546)
C2: (94.728,114.836,98.602)
C6: (95.131,116.089,96.538)
C5: (96.401,116.342,97.109)
C4: (96.690,115.812,98.348)
P: (102.245,118.376,96.606)
C4': (101.077,116.237,99.680)
C2': (99.488,114.510,99.622)
O2': (99.797,113.974,100.887)
N1: (94.345,115.307,97.373)
N2: (93.825,114.108,99.269)
N3: (95.908,115.061,99.144)
N7: (97.479,117.067,96.618)
N9: (97.979,116.198,98.619)
O5': (101.478,117.414,97.612)
O3': (101.792,114.006,99.061)
OP1: (99.870,106.443,104.148)
OP2: (102.090,105.434,104.978)
C3': (102.474,110.518,103.692)
C1': (100.283,110.595,102.840)
C5': (102.498,107.990,103.273)
O4': (100.907,109.489,102.223)
C8: (98.230,109.231,103.541)
O2': (100.901,112.165,104.574)
C6: (95.470,111.068,102.353)
C5: (96.665,110.450,102.770)
C4: (97.841,111.107,102.476)
P: (101.103,106.552,104.977)
C4': (102.272,109.368,102.710)
C2': (101.048,110.827,104.140)
C2: (96.778,112.756,101.486)
N1: (95.568,112.242,101.695)
N3: (97.967,112.278,101.832)
N6: (94.252,110.566,102.574)
N7: (96.923,109.264,103.445)
N9: (98.851,110.311,102.964)
O5': (101.863,107.880,104.549)
O3': (102.985,111.625,102.975)
Image (generated by PyMOL):
PyMOL image
show in jmol