ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ9:0197:0653

Extra

PDB:
ATOM 1 O3' C A 196 52.862 104.040 33.592 1.00 37.36 O
ATOM 2 P G A 197 53.285 102.962 34.701 1.00 39.94 P
ATOM 3 OP1 G A 197 52.801 103.499 35.999 1.00 39.94 O
ATOM 4 OP2 G A 197 54.723 102.630 34.543 1.00 38.28 O
ATOM 5 O5' G A 197 52.431 101.667 34.308 1.00 39.60 O
ATOM 6 C5' G A 197 50.978 101.701 34.300 1.00 38.43 C
ATOM 7 C4' G A 197 50.413 100.452 33.642 1.00 39.26 C
ATOM 8 O4' G A 197 50.821 100.410 32.245 1.00 38.81 O
ATOM 9 C3' G A 197 50.889 99.109 34.182 1.00 39.30 C
ATOM 10 O3' G A 197 50.238 98.690 35.370 1.00 38.61 O
ATOM 11 C2' G A 197 50.590 98.178 33.018 1.00 38.55 C
ATOM 12 O2' G A 197 49.214 97.873 32.917 1.00 38.34 O
ATOM 13 C1' G A 197 50.994 99.057 31.839 1.00 38.30 C
ATOM 14 N9 G A 197 52.391 98.846 31.463 1.00 37.68 N
ATOM 15 C8 G A 197 53.475 99.637 31.757 1.00 35.86 C
ATOM 16 N7 G A 197 54.597 99.168 31.275 1.00 36.31 N
ATOM 17 C5 G A 197 54.228 97.999 30.621 1.00 38.00 C
ATOM 18 C6 G A 197 55.015 97.047 29.906 1.00 39.57 C
ATOM 19 O6 G A 197 56.238 97.056 29.686 1.00 39.36 O
ATOM 20 N1 G A 197 54.235 96.002 29.423 1.00 40.18 N
ATOM 21 C2 G A 197 52.880 95.882 29.595 1.00 40.77 C
ATOM 22 N2 G A 197 52.307 94.789 29.060 1.00 40.85 N
ATOM 23 N3 G A 197 52.138 96.762 30.245 1.00 39.38 N
ATOM 24 C4 G A 197 52.872 97.785 30.730 1.00 38.06 C
ATOM 25 P U A 198 51.093 97.931 36.502 1.00 42.10 P
ATOM 26 OP1 U A 198 50.157 97.611 37.613 1.00 41.52 O
ATOM 27 OP2 U A 198 52.300 98.753 36.777 1.00 45.18 O
ATOM 28 O5' U A 198 51.641 96.598 35.806 1.00 39.82 O
TER

ATOM 1 O3' U B 652 40.164 96.922 34.207 1.00 38.84 O
ATOM 2 P A B 653 40.711 98.325 33.637 1.00 41.12 P
ATOM 3 OP1 A B 653 40.348 99.366 34.642 1.00 36.19 O
ATOM 4 OP2 A B 653 40.256 98.480 32.224 1.00 39.54 O
ATOM 5 O5' A B 653 42.295 98.116 33.592 1.00 37.31 O
ATOM 6 C5' A B 653 43.075 98.144 34.798 1.00 38.57 C
ATOM 7 C4' A B 653 44.553 98.254 34.480 1.00 38.89 C
ATOM 8 O4' A B 653 45.061 97.008 33.939 1.00 38.49 O
ATOM 9 C3' A B 653 44.946 99.279 33.431 1.00 39.06 C
ATOM 10 O3' A B 653 44.939 100.594 33.953 1.00 39.77 O
ATOM 11 C2' A B 653 46.337 98.803 33.039 1.00 39.52 C
ATOM 12 O2' A B 653 47.330 99.138 33.987 1.00 38.80 O
ATOM 13 C1' A B 653 46.142 97.285 33.056 1.00 38.84 C
ATOM 14 N9 A B 653 45.830 96.725 31.740 1.00 37.98 N
ATOM 15 C8 A B 653 44.602 96.407 31.215 1.00 37.96 C
ATOM 16 N7 A B 653 44.662 95.860 30.024 1.00 37.91 N
ATOM 17 C5 A B 653 46.020 95.824 29.745 1.00 37.58 C
ATOM 18 C6 A B 653 46.747 95.341 28.639 1.00 39.34 C
ATOM 19 N6 A B 653 46.185 94.738 27.587 1.00 39.61 N
ATOM 20 N1 A B 653 48.093 95.491 28.657 1.00 40.05 N
ATOM 21 C2 A B 653 48.654 96.069 29.725 1.00 37.94 C
ATOM 22 N3 A B 653 48.077 96.537 30.833 1.00 36.88 N
ATOM 23 C4 A B 653 46.746 96.381 30.778 1.00 36.51 C
ATOM 24 P A B 654 44.320 101.788 33.077 1.00 43.01 P
ATOM 25 OP1 A B 654 44.134 102.940 34.002 1.00 41.98 O
ATOM 26 OP2 A B 654 43.151 101.292 32.299 1.00 41.09 O
ATOM 27 O5' A B 654 45.500 102.115 32.051 1.00 40.15 O
TER

Atoms:
OP1: (52.801,103.499,35.999)
OP2: (54.723,102.630,34.543)
C3': (50.889,99.109,34.182)
C1': (50.994,99.057,31.839)
C5': (50.978,101.701,34.300)
O6: (56.238,97.056,29.686)
O4': (50.821,100.410,32.245)
C8: (53.475,99.637,31.757)
C2: (52.880,95.882,29.595)
C6: (55.015,97.047,29.906)
C5: (54.228,97.999,30.621)
C4: (52.872,97.785,30.730)
P: (53.285,102.962,34.701)
C4': (50.413,100.452,33.642)
C2': (50.590,98.178,33.018)
O2': (49.214,97.873,32.917)
N1: (54.235,96.002,29.423)
N2: (52.307,94.789,29.060)
N3: (52.138,96.762,30.245)
N7: (54.597,99.168,31.275)
N9: (52.391,98.846,31.463)
O5': (52.431,101.667,34.308)
O3': (50.238,98.690,35.370)
OP1: (40.348,99.366,34.642)
OP2: (40.256,98.480,32.224)
C3': (44.946,99.279,33.431)
C1': (46.142,97.285,33.056)
C5': (43.075,98.144,34.798)
O4': (45.061,97.008,33.939)
C8: (44.602,96.407,31.215)
O2': (47.330,99.138,33.987)
C6: (46.747,95.341,28.639)
C5: (46.020,95.824,29.745)
C4: (46.746,96.381,30.778)
P: (40.711,98.325,33.637)
C4': (44.553,98.254,34.480)
C2': (46.337,98.803,33.039)
C2: (48.654,96.069,29.725)
N1: (48.093,95.491,28.657)
N3: (48.077,96.537,30.833)
N6: (46.185,94.738,27.587)
N7: (44.662,95.860,30.024)
N9: (45.830,96.725,31.740)
O5': (42.295,98.116,33.592)
O3': (44.939,100.594,33.953)
Image (generated by PyMOL):
PyMOL image
show in jmol