ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:02468:01953

Extra

PDB:
ATOM 1 O3' C A2467 101.520 118.796 97.236 1.00 42.05 O
ATOM 2 P G A2468 101.828 117.367 96.567 1.00 43.88 P
ATOM 3 OP1 G A2468 103.298 117.164 96.670 1.00 45.94 O
ATOM 4 OP2 G A2468 101.173 117.291 95.238 1.00 42.42 O
ATOM 5 O5' G A2468 101.119 116.332 97.547 1.00 43.25 O
ATOM 6 C5' G A2468 101.563 116.188 98.909 1.00 41.17 C
ATOM 7 C4' G A2468 100.618 115.291 99.673 1.00 41.12 C
ATOM 8 O4' G A2468 99.344 115.958 99.873 1.00 39.57 O
ATOM 9 C3' G A2468 100.256 114.003 98.955 1.00 40.95 C
ATOM 10 O3' G A2468 101.250 113.016 99.137 1.00 43.23 O
ATOM 11 C2' G A2468 98.933 113.639 99.601 1.00 39.42 C
ATOM 12 O2' G A2468 99.124 113.095 100.886 1.00 41.10 O
ATOM 13 C1' G A2468 98.287 115.019 99.732 1.00 40.43 C
ATOM 14 N9 G A2468 97.526 115.377 98.539 1.00 39.08 N
ATOM 15 C8 G A2468 97.984 116.080 97.451 1.00 37.78 C
ATOM 16 N7 G A2468 97.073 116.259 96.538 1.00 37.47 N
ATOM 17 C5 G A2468 95.946 115.630 97.048 1.00 37.75 C
ATOM 18 C6 G A2468 94.648 115.477 96.489 1.00 37.09 C
ATOM 19 O6 G A2468 94.224 115.891 95.399 1.00 33.51 O
ATOM 20 N1 G A2468 93.812 114.757 97.334 1.00 34.63 N
ATOM 21 C2 G A2468 94.176 114.247 98.557 1.00 38.03 C
ATOM 22 N2 G A2468 93.225 113.582 99.233 1.00 37.81 N
ATOM 23 N3 G A2468 95.384 114.379 99.085 1.00 39.75 N
ATOM 24 C4 G A2468 96.211 115.077 98.281 1.00 37.94 C
ATOM 25 P U A2469 101.584 112.003 97.947 1.00 42.74 P
ATOM 26 OP1 U A2469 102.782 111.246 98.363 1.00 45.87 O
ATOM 27 OP2 U A2469 101.593 112.738 96.658 1.00 44.04 O
ATOM 28 O5' U A2469 100.330 111.022 97.926 1.00 45.40 O
TER

ATOM 1 O3' C B1952 100.766 105.970 106.353 1.00 67.91 O
ATOM 2 P A B1953 101.235 105.748 104.831 1.00 68.66 P
ATOM 3 OP1 A B1953 100.033 105.575 103.971 1.00 67.98 O
ATOM 4 OP2 A B1953 102.285 104.694 104.849 1.00 69.59 O
ATOM 5 O5' A B1953 101.927 107.129 104.453 1.00 68.55 O
ATOM 6 C5' A B1953 102.648 107.286 103.222 1.00 66.02 C
ATOM 7 C4' A B1953 102.372 108.648 102.634 1.00 65.65 C
ATOM 8 O4' A B1953 101.016 108.697 102.112 1.00 64.36 O
ATOM 9 C3' A B1953 102.492 109.818 103.599 1.00 64.91 C
ATOM 10 O3' A B1953 102.926 110.939 102.859 1.00 67.06 O
ATOM 11 C2' A B1953 101.046 110.038 104.040 1.00 64.44 C
ATOM 12 O2' A B1953 100.802 111.365 104.464 1.00 63.07 O
ATOM 13 C1' A B1953 100.296 109.739 102.743 1.00 62.34 C
ATOM 14 N9 A B1953 98.915 109.285 102.904 1.00 60.66 N
ATOM 15 C8 A B1953 98.483 108.091 103.421 1.00 60.52 C
ATOM 16 N7 A B1953 97.185 107.930 103.364 1.00 60.81 N
ATOM 17 C5 A B1953 96.730 109.103 102.782 1.00 59.20 C
ATOM 18 C6 A B1953 95.446 109.542 102.428 1.00 60.21 C
ATOM 19 N6 A B1953 94.344 108.806 102.595 1.00 61.93 N
ATOM 20 N1 A B1953 95.328 110.771 101.878 1.00 59.50 N
ATOM 21 C2 A B1953 96.437 111.492 101.691 1.00 58.83 C
ATOM 22 N3 A B1953 97.701 111.180 101.970 1.00 58.74 N
ATOM 23 C4 A B1953 97.781 109.957 102.517 1.00 58.72 C
ATOM 24 P U B1954 104.276 111.693 103.270 1.00 69.59 P
ATOM 25 OP1 U B1954 105.428 110.938 102.692 1.00 66.71 O
ATOM 26 OP2 U B1954 104.246 111.987 104.726 1.00 69.08 O
ATOM 27 O5' U B1954 104.113 113.096 102.540 1.00 67.93 O
TER

Atoms:
OP1: (103.298,117.164,96.670)
OP2: (101.173,117.291,95.238)
C3': (100.256,114.003,98.955)
C1': (98.287,115.019,99.732)
C5': (101.563,116.188,98.909)
O6: (94.224,115.891,95.399)
O4': (99.344,115.958,99.873)
C8: (97.984,116.080,97.451)
C2: (94.176,114.247,98.557)
C6: (94.648,115.477,96.489)
C5: (95.946,115.630,97.048)
C4: (96.211,115.077,98.281)
P: (101.828,117.367,96.567)
C4': (100.618,115.291,99.673)
C2': (98.933,113.639,99.601)
O2': (99.124,113.095,100.886)
N1: (93.812,114.757,97.334)
N2: (93.225,113.582,99.233)
N3: (95.384,114.379,99.085)
N7: (97.073,116.259,96.538)
N9: (97.526,115.377,98.539)
O5': (101.119,116.332,97.547)
O3': (101.250,113.016,99.137)
OP1: (100.033,105.575,103.971)
OP2: (102.285,104.694,104.849)
C3': (102.492,109.818,103.599)
C1': (100.296,109.739,102.743)
C5': (102.648,107.286,103.222)
O4': (101.016,108.697,102.112)
C8: (98.483,108.091,103.421)
O2': (100.802,111.365,104.464)
C6: (95.446,109.542,102.428)
C5: (96.730,109.103,102.782)
C4: (97.781,109.957,102.517)
P: (101.235,105.748,104.831)
C4': (102.372,108.648,102.634)
C2': (101.046,110.038,104.040)
C2: (96.437,111.492,101.691)
N1: (95.328,110.771,101.878)
N3: (97.701,111.180,101.970)
N6: (94.344,108.806,102.595)
N7: (97.185,107.930,103.364)
N9: (98.915,109.285,102.904)
O5': (101.927,107.129,104.453)
O3': (102.926,110.939,102.859)
Image (generated by PyMOL):
PyMOL image
show in jmol