ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:0197:0653

Extra

PDB:
ATOM 1 O3' C A 196 52.830 104.165 33.766 1.00 42.75 O
ATOM 2 P G A 197 53.248 103.066 34.863 1.00 41.62 P
ATOM 3 OP1 G A 197 52.733 103.576 36.156 1.00 43.79 O
ATOM 4 OP2 G A 197 54.682 102.750 34.730 1.00 39.40 O
ATOM 5 O5' G A 197 52.431 101.762 34.428 1.00 43.77 O
ATOM 6 C5' G A 197 50.983 101.770 34.365 1.00 43.00 C
ATOM 7 C4' G A 197 50.461 100.499 33.714 1.00 44.73 C
ATOM 8 O4' G A 197 50.864 100.454 32.315 1.00 43.25 O
ATOM 9 C3' G A 197 50.964 99.172 34.268 1.00 44.89 C
ATOM 10 O3' G A 197 50.303 98.745 35.450 1.00 46.38 O
ATOM 11 C2' G A 197 50.672 98.223 33.116 1.00 43.93 C
ATOM 12 O2' G A 197 49.308 97.866 33.046 1.00 40.46 O
ATOM 13 C1' G A 197 51.044 99.099 31.920 1.00 43.14 C
ATOM 14 N9 G A 197 52.440 98.893 31.542 1.00 41.78 N
ATOM 15 C8 G A 197 53.513 99.696 31.828 1.00 40.90 C
ATOM 16 N7 G A 197 54.637 99.233 31.357 1.00 42.76 N
ATOM 17 C5 G A 197 54.284 98.056 30.714 1.00 43.06 C
ATOM 18 C6 G A 197 55.083 97.113 30.003 1.00 44.46 C
ATOM 19 O6 G A 197 56.309 97.139 29.779 1.00 41.85 O
ATOM 20 N1 G A 197 54.315 96.054 29.528 1.00 43.93 N
ATOM 21 C2 G A 197 52.962 95.919 29.703 1.00 45.13 C
ATOM 22 N2 G A 197 52.403 94.816 29.176 1.00 47.22 N
ATOM 23 N3 G A 197 52.209 96.793 30.347 1.00 44.04 N
ATOM 24 C4 G A 197 52.932 97.829 30.823 1.00 42.89 C
ATOM 25 P U A 198 51.160 98.082 36.632 1.00 48.33 P
ATOM 26 OP1 U A 198 50.225 97.829 37.754 1.00 50.16 O
ATOM 27 OP2 U A 198 52.342 98.959 36.847 1.00 54.20 O
ATOM 28 O5' U A 198 51.725 96.705 36.045 1.00 47.71 O
TER

ATOM 1 O3' U B 652 40.178 96.990 34.326 1.00 47.03 O
ATOM 2 P A B 653 40.732 98.383 33.741 1.00 46.48 P
ATOM 3 OP1 A B 653 40.353 99.426 34.731 1.00 44.28 O
ATOM 4 OP2 A B 653 40.279 98.508 32.326 1.00 45.41 O
ATOM 5 O5' A B 653 42.313 98.202 33.720 1.00 42.17 O
ATOM 6 C5' A B 653 43.084 98.261 34.931 1.00 42.52 C
ATOM 7 C4' A B 653 44.565 98.343 34.615 1.00 42.52 C
ATOM 8 O4' A B 653 45.060 97.084 34.089 1.00 41.83 O
ATOM 9 C3' A B 653 44.964 99.351 33.550 1.00 43.67 C
ATOM 10 O3' A B 653 44.982 100.669 34.068 1.00 44.61 O
ATOM 11 C2' A B 653 46.346 98.856 33.151 1.00 43.68 C
ATOM 12 O2' A B 653 47.351 99.206 34.081 1.00 42.22 O
ATOM 13 C1' A B 653 46.145 97.340 33.206 1.00 44.00 C
ATOM 14 N9 A B 653 45.864 96.737 31.900 1.00 43.47 N
ATOM 15 C8 A B 653 44.665 96.303 31.387 1.00 44.72 C
ATOM 16 N7 A B 653 44.768 95.746 30.205 1.00 42.82 N
ATOM 17 C5 A B 653 46.121 95.826 29.916 1.00 42.58 C
ATOM 18 C6 A B 653 46.883 95.387 28.818 1.00 44.00 C
ATOM 19 N6 A B 653 46.375 94.717 27.782 1.00 41.52 N
ATOM 20 N1 A B 653 48.209 95.650 28.828 1.00 44.59 N
ATOM 21 C2 A B 653 48.721 96.296 29.876 1.00 43.74 C
ATOM 22 N3 A B 653 48.112 96.738 30.974 1.00 42.56 N
ATOM 23 C4 A B 653 46.801 96.464 30.934 1.00 42.07 C
ATOM 24 P A B 654 44.324 101.867 33.226 1.00 47.17 P
ATOM 25 OP1 A B 654 44.116 102.984 34.187 1.00 47.14 O
ATOM 26 OP2 A B 654 43.172 101.363 32.445 1.00 46.80 O
ATOM 27 O5' A B 654 45.478 102.273 32.202 1.00 45.20 O
TER

Atoms:
OP1: (52.733,103.576,36.156)
OP2: (54.682,102.750,34.730)
C3': (50.964,99.172,34.268)
C1': (51.044,99.099,31.920)
C5': (50.983,101.770,34.365)
O6: (56.309,97.139,29.779)
O4': (50.864,100.454,32.315)
C8: (53.513,99.696,31.828)
C2: (52.962,95.919,29.703)
C6: (55.083,97.113,30.003)
C5: (54.284,98.056,30.714)
C4: (52.932,97.829,30.823)
P: (53.248,103.066,34.863)
C4': (50.461,100.499,33.714)
C2': (50.672,98.223,33.116)
O2': (49.308,97.866,33.046)
N1: (54.315,96.054,29.528)
N2: (52.403,94.816,29.176)
N3: (52.209,96.793,30.347)
N7: (54.637,99.233,31.357)
N9: (52.440,98.893,31.542)
O5': (52.431,101.762,34.428)
O3': (50.303,98.745,35.450)
OP1: (40.353,99.426,34.731)
OP2: (40.279,98.508,32.326)
C3': (44.964,99.351,33.550)
C1': (46.145,97.340,33.206)
C5': (43.084,98.261,34.931)
O4': (45.060,97.084,34.089)
C8: (44.665,96.303,31.387)
O2': (47.351,99.206,34.081)
C6: (46.883,95.387,28.818)
C5: (46.121,95.826,29.916)
C4: (46.801,96.464,30.934)
P: (40.732,98.383,33.741)
C4': (44.565,98.343,34.615)
C2': (46.346,98.856,33.151)
C2: (48.721,96.296,29.876)
N1: (48.209,95.650,28.828)
N3: (48.112,96.738,30.974)
N6: (46.375,94.717,27.782)
N7: (44.768,95.746,30.205)
N9: (45.864,96.737,31.900)
O5': (42.313,98.202,33.720)
O3': (44.982,100.669,34.068)
Image (generated by PyMOL):
PyMOL image
show in jmol