ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHC:A520:A488

Extra

PDB:
ATOM 1 O3' G A 519 112.760 35.300 64.340 1.00 85.96 O
ATOM 2 P G A 520 111.319 35.279 65.064 1.00 99.30 P
ATOM 3 OP1 G A 520 111.299 36.400 66.041 1.00117.76 O
ATOM 4 OP2 G A 520 111.099 33.898 65.559 1.00110.94 O
ATOM 5 O5' G A 520 110.318 35.595 63.871 1.00 91.72 O
ATOM 6 C5' G A 520 110.309 36.871 63.241 1.00 91.16 C
ATOM 7 C4' G A 520 109.412 36.882 62.026 1.00 93.80 C
ATOM 8 O4' G A 520 109.854 35.866 61.080 1.00 87.47 O
ATOM 9 C3' G A 520 107.937 36.570 62.286 1.00 87.95 C
ATOM 10 O3' G A 520 107.197 37.721 62.652 1.00 87.15 O
ATOM 11 C2' G A 520 107.477 35.952 60.977 1.00 87.97 C
ATOM 12 O2' G A 520 107.170 36.963 60.033 1.00 90.66 O
ATOM 13 C1' G A 520 108.742 35.214 60.512 1.00 91.55 C
ATOM 14 N9 G A 520 108.754 33.804 60.957 1.00101.75 N
ATOM 15 C8 G A 520 109.621 33.208 61.846 1.00 99.43 C
ATOM 16 N7 G A 520 109.377 31.942 62.053 1.00 96.93 N
ATOM 17 C5 G A 520 108.277 31.691 61.253 1.00100.04 C
ATOM 18 C6 G A 520 107.559 30.496 61.057 1.00103.22 C
ATOM 19 O6 G A 520 107.770 29.392 61.574 1.00107.65 O
ATOM 20 N1 G A 520 106.511 30.686 60.161 1.00106.37 N
ATOM 21 C2 G A 520 106.193 31.865 59.529 1.00104.64 C
ATOM 22 N2 G A 520 105.142 31.852 58.696 1.00104.82 N
ATOM 23 N3 G A 520 106.861 32.984 59.706 1.00103.04 N
ATOM 24 C4 G A 520 107.880 32.820 60.571 1.00102.18 C
ATOM 25 P C A 521 105.927 37.602 63.624 1.00105.61 P
ATOM 26 OP1 C A 521 105.644 38.967 64.146 1.00109.41 O
ATOM 27 OP2 C A 521 106.212 36.515 64.589 1.00109.93 O
ATOM 28 O5' C A 521 104.775 37.157 62.631 1.00 99.15 O
TER

ATOM 1 O3' A B 487 102.443 39.543 54.080 1.00117.91 O
ATOM 2 P A B 488 103.384 40.285 55.139 1.00105.91 P
ATOM 3 OP1 A B 488 102.581 40.479 56.372 1.00122.97 O
ATOM 4 OP2 A B 488 103.949 41.470 54.459 1.00104.84 O
ATOM 5 O5' A B 488 104.535 39.221 55.407 1.00 96.50 O
ATOM 6 C5' A B 488 105.395 39.351 56.534 1.00100.42 C
ATOM 7 C4' A B 488 105.933 38.014 56.990 1.00 95.94 C
ATOM 8 O4' A B 488 104.828 37.116 57.277 1.00 93.84 O
ATOM 9 C3' A B 488 106.787 37.251 55.978 1.00100.08 C
ATOM 10 O3' A B 488 108.142 37.685 55.941 1.00 98.75 O
ATOM 11 C2' A B 488 106.628 35.806 56.424 1.00100.62 C
ATOM 12 O2' A B 488 107.483 35.528 57.528 1.00100.02 O
ATOM 13 C1' A B 488 105.174 35.793 56.912 1.00102.66 C
ATOM 14 N9 A B 488 104.228 35.318 55.868 1.00103.84 N
ATOM 15 C8 A B 488 103.953 35.840 54.621 1.00105.21 C
ATOM 16 N7 A B 488 103.046 35.182 53.931 1.00 97.63 N
ATOM 17 C5 A B 488 102.697 34.146 54.779 1.00 95.43 C
ATOM 18 C6 A B 488 101.789 33.087 54.648 1.00 98.50 C
ATOM 19 N6 A B 488 101.031 32.871 53.575 1.00101.11 N
ATOM 20 N1 A B 488 101.681 32.225 55.675 1.00102.27 N
ATOM 21 C2 A B 488 102.440 32.418 56.758 1.00101.64 C
ATOM 22 N3 A B 488 103.327 33.374 57.000 1.00102.13 N
ATOM 23 C4 A B 488 103.410 34.217 55.962 1.00 97.82 C
ATOM 24 P C B 489 108.481 39.230 55.696 1.00117.43 P
ATOM 25 OP1 C B 489 108.564 39.877 57.028 1.00107.99 O
ATOM 26 OP2 C B 489 107.503 39.739 54.714 1.00102.64 O
ATOM 27 O5' C B 489 109.909 39.185 55.041 1.00 89.97 O
TER

Atoms:
OP1: (111.299,36.400,66.041)
OP2: (111.099,33.898,65.559)
C3': (107.937,36.570,62.286)
C1': (108.742,35.214,60.512)
C5': (110.309,36.871,63.241)
O6: (107.770,29.392,61.574)
O4': (109.854,35.866,61.080)
C8: (109.621,33.208,61.846)
C2: (106.193,31.865,59.529)
C6: (107.559,30.496,61.057)
C5: (108.277,31.691,61.253)
C4: (107.880,32.820,60.571)
P: (111.319,35.279,65.064)
C4': (109.412,36.882,62.026)
C2': (107.477,35.952,60.977)
O2': (107.170,36.963,60.033)
N1: (106.511,30.686,60.161)
N2: (105.142,31.852,58.696)
N3: (106.861,32.984,59.706)
N7: (109.377,31.942,62.053)
N9: (108.754,33.804,60.957)
O5': (110.318,35.595,63.871)
O3': (107.197,37.721,62.652)
OP1: (102.581,40.479,56.372)
OP2: (103.949,41.470,54.459)
C3': (106.787,37.251,55.978)
C1': (105.174,35.793,56.912)
C5': (105.395,39.351,56.534)
O4': (104.828,37.116,57.277)
C8: (103.953,35.840,54.621)
O2': (107.483,35.528,57.528)
C6: (101.789,33.087,54.648)
C5: (102.697,34.146,54.779)
C4: (103.410,34.217,55.962)
P: (103.384,40.285,55.139)
C4': (105.933,38.014,56.990)
C2': (106.628,35.806,56.424)
C2: (102.440,32.418,56.758)
N1: (101.681,32.225,55.675)
N3: (103.327,33.374,57.000)
N6: (101.031,32.871,53.575)
N7: (103.046,35.182,53.931)
N9: (104.228,35.318,55.868)
O5': (104.535,39.221,55.407)
O3': (108.142,37.685,55.941)
Image (generated by PyMOL):
PyMOL image
show in jmol