Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:155:157
Extra
PDB:
ATOM 1 O3' A A 54 57.824 -20.771 126.313 1.00 47.55 O
ATOM 2 P G A 55 59.039 -19.746 126.414 1.00 48.00 P
ATOM 3 OP1 G A 55 59.331 -19.575 127.860 1.00 48.60 O
ATOM 4 OP2 G A 55 58.693 -18.546 125.597 1.00 47.58 O
ATOM 5 O5' G A 55 60.201 -20.564 125.726 1.00 47.92 O
ATOM 6 C5' G A 55 60.670 -21.783 126.296 1.00 48.29 C
ATOM 7 C4' G A 55 61.498 -22.551 125.310 1.00 48.07 C
ATOM 8 O4' G A 55 60.804 -22.542 124.050 1.00 47.49 O
ATOM 9 C3' G A 55 62.867 -21.961 124.988 1.00 48.09 C
ATOM 10 O3' G A 55 63.882 -22.390 125.882 1.00 48.61 O
ATOM 11 C2' G A 55 63.113 -22.409 123.562 1.00 47.61 C
ATOM 12 O2' G A 55 63.588 -23.741 123.548 1.00 47.78 O
ATOM 13 C1' G A 55 61.713 -22.426 122.988 1.00 47.20 C
ATOM 14 N9 G A 55 61.385 -21.225 122.207 1.00 46.79 N
ATOM 15 C8 G A 55 60.706 -20.154 122.653 1.00 46.79 C
ATOM 16 N7 G A 55 60.519 -19.288 121.707 1.00 46.37 N
ATOM 17 C5 G A 55 61.099 -19.824 120.589 1.00 46.07 C
ATOM 18 C6 G A 55 61.156 -19.304 119.282 1.00 45.59 C
ATOM 19 O6 G A 55 60.689 -18.232 118.847 1.00 45.32 O
ATOM 20 N1 G A 55 61.804 -20.201 118.450 1.00 45.43 N
ATOM 21 C2 G A 55 62.281 -21.424 118.841 1.00 45.71 C
ATOM 22 N2 G A 55 62.853 -22.151 117.875 1.00 45.51 N
ATOM 23 N3 G A 55 62.212 -21.905 120.058 1.00 46.16 N
ATOM 24 C4 G A 55 61.613 -21.041 120.875 1.00 46.32 C
ATOM 25 P G A 56 65.000 -21.348 126.363 1.00 47.13 P
ATOM 26 OP1 G A 56 65.432 -21.759 127.728 1.00 47.77 O
ATOM 27 OP2 G A 56 64.390 -19.994 126.171 1.00 46.88 O
ATOM 28 O5' G A 56 66.203 -21.530 125.306 1.00 46.91 O
TER
ATOM 1 O3' G B 56 68.870 -23.725 122.185 1.00 46.32 O
ATOM 2 P A B 57 69.498 -25.152 122.557 1.00 50.30 P
ATOM 3 OP1 A B 57 69.038 -25.528 123.919 1.00 50.77 O
ATOM 4 OP2 A B 57 70.921 -25.060 122.304 1.00 50.44 O
ATOM 5 O5' A B 57 68.823 -26.109 121.459 1.00 49.87 O
ATOM 6 C5' A B 57 67.511 -26.623 121.625 1.00 49.76 C
ATOM 7 C4' A B 57 66.458 -25.619 121.239 1.00 49.36 C
ATOM 8 O4' A B 57 66.645 -25.186 119.874 1.00 48.85 O
ATOM 9 C3' A B 57 65.033 -26.125 121.261 1.00 49.19 C
ATOM 10 O3' A B 57 64.507 -26.143 122.557 1.00 49.59 O
ATOM 11 C2' A B 57 64.326 -25.150 120.352 1.00 48.67 C
ATOM 12 O2' A B 57 64.124 -23.921 121.024 1.00 48.77 O
ATOM 13 C1' A B 57 65.382 -24.939 119.277 1.00 48.42 C
ATOM 14 N9 A B 57 65.204 -25.871 118.152 1.00 48.09 N
ATOM 15 C8 A B 57 66.041 -26.901 117.742 1.00 48.18 C
ATOM 16 N7 A B 57 65.605 -27.578 116.721 1.00 47.85 N
ATOM 17 C5 A B 57 64.393 -26.944 116.434 1.00 47.50 C
ATOM 18 C6 A B 57 63.424 -27.161 115.442 1.00 47.06 C
ATOM 19 N6 A B 57 63.509 -28.115 114.525 1.00 46.88 N
ATOM 20 N1 A B 57 62.355 -26.345 115.423 1.00 46.83 N
ATOM 21 C2 A B 57 62.258 -25.385 116.347 1.00 47.02 C
ATOM 22 N3 A B 57 63.102 -25.066 117.331 1.00 47.44 N
ATOM 23 C4 A B 57 64.148 -25.892 117.309 1.00 47.66 C
ATOM 24 P A B 58 63.825 -27.460 123.132 1.00 50.90 P
ATOM 25 OP1 A B 58 63.759 -27.311 124.599 1.00 51.43 O
ATOM 26 OP2 A B 58 64.532 -28.610 122.550 1.00 50.91 O
ATOM 27 O5' A B 58 62.387 -27.359 122.521 1.00 50.46 O
TER
ATOM 2 P G A 55 59.039 -19.746 126.414 1.00 48.00 P
ATOM 3 OP1 G A 55 59.331 -19.575 127.860 1.00 48.60 O
ATOM 4 OP2 G A 55 58.693 -18.546 125.597 1.00 47.58 O
ATOM 5 O5' G A 55 60.201 -20.564 125.726 1.00 47.92 O
ATOM 6 C5' G A 55 60.670 -21.783 126.296 1.00 48.29 C
ATOM 7 C4' G A 55 61.498 -22.551 125.310 1.00 48.07 C
ATOM 8 O4' G A 55 60.804 -22.542 124.050 1.00 47.49 O
ATOM 9 C3' G A 55 62.867 -21.961 124.988 1.00 48.09 C
ATOM 10 O3' G A 55 63.882 -22.390 125.882 1.00 48.61 O
ATOM 11 C2' G A 55 63.113 -22.409 123.562 1.00 47.61 C
ATOM 12 O2' G A 55 63.588 -23.741 123.548 1.00 47.78 O
ATOM 13 C1' G A 55 61.713 -22.426 122.988 1.00 47.20 C
ATOM 14 N9 G A 55 61.385 -21.225 122.207 1.00 46.79 N
ATOM 15 C8 G A 55 60.706 -20.154 122.653 1.00 46.79 C
ATOM 16 N7 G A 55 60.519 -19.288 121.707 1.00 46.37 N
ATOM 17 C5 G A 55 61.099 -19.824 120.589 1.00 46.07 C
ATOM 18 C6 G A 55 61.156 -19.304 119.282 1.00 45.59 C
ATOM 19 O6 G A 55 60.689 -18.232 118.847 1.00 45.32 O
ATOM 20 N1 G A 55 61.804 -20.201 118.450 1.00 45.43 N
ATOM 21 C2 G A 55 62.281 -21.424 118.841 1.00 45.71 C
ATOM 22 N2 G A 55 62.853 -22.151 117.875 1.00 45.51 N
ATOM 23 N3 G A 55 62.212 -21.905 120.058 1.00 46.16 N
ATOM 24 C4 G A 55 61.613 -21.041 120.875 1.00 46.32 C
ATOM 25 P G A 56 65.000 -21.348 126.363 1.00 47.13 P
ATOM 26 OP1 G A 56 65.432 -21.759 127.728 1.00 47.77 O
ATOM 27 OP2 G A 56 64.390 -19.994 126.171 1.00 46.88 O
ATOM 28 O5' G A 56 66.203 -21.530 125.306 1.00 46.91 O
TER
ATOM 1 O3' G B 56 68.870 -23.725 122.185 1.00 46.32 O
ATOM 2 P A B 57 69.498 -25.152 122.557 1.00 50.30 P
ATOM 3 OP1 A B 57 69.038 -25.528 123.919 1.00 50.77 O
ATOM 4 OP2 A B 57 70.921 -25.060 122.304 1.00 50.44 O
ATOM 5 O5' A B 57 68.823 -26.109 121.459 1.00 49.87 O
ATOM 6 C5' A B 57 67.511 -26.623 121.625 1.00 49.76 C
ATOM 7 C4' A B 57 66.458 -25.619 121.239 1.00 49.36 C
ATOM 8 O4' A B 57 66.645 -25.186 119.874 1.00 48.85 O
ATOM 9 C3' A B 57 65.033 -26.125 121.261 1.00 49.19 C
ATOM 10 O3' A B 57 64.507 -26.143 122.557 1.00 49.59 O
ATOM 11 C2' A B 57 64.326 -25.150 120.352 1.00 48.67 C
ATOM 12 O2' A B 57 64.124 -23.921 121.024 1.00 48.77 O
ATOM 13 C1' A B 57 65.382 -24.939 119.277 1.00 48.42 C
ATOM 14 N9 A B 57 65.204 -25.871 118.152 1.00 48.09 N
ATOM 15 C8 A B 57 66.041 -26.901 117.742 1.00 48.18 C
ATOM 16 N7 A B 57 65.605 -27.578 116.721 1.00 47.85 N
ATOM 17 C5 A B 57 64.393 -26.944 116.434 1.00 47.50 C
ATOM 18 C6 A B 57 63.424 -27.161 115.442 1.00 47.06 C
ATOM 19 N6 A B 57 63.509 -28.115 114.525 1.00 46.88 N
ATOM 20 N1 A B 57 62.355 -26.345 115.423 1.00 46.83 N
ATOM 21 C2 A B 57 62.258 -25.385 116.347 1.00 47.02 C
ATOM 22 N3 A B 57 63.102 -25.066 117.331 1.00 47.44 N
ATOM 23 C4 A B 57 64.148 -25.892 117.309 1.00 47.66 C
ATOM 24 P A B 58 63.825 -27.460 123.132 1.00 50.90 P
ATOM 25 OP1 A B 58 63.759 -27.311 124.599 1.00 51.43 O
ATOM 26 OP2 A B 58 64.532 -28.610 122.550 1.00 50.91 O
ATOM 27 O5' A B 58 62.387 -27.359 122.521 1.00 50.46 O
TER
Atoms:
OP1: (59.331,-19.575,127.860)
OP2: (58.693,-18.546,125.597)
C3': (62.867,-21.961,124.988)
C1': (61.713,-22.426,122.988)
C5': (60.670,-21.783,126.296)
O6: (60.689,-18.232,118.847)
O4': (60.804,-22.542,124.050)
C8: (60.706,-20.154,122.653)
C2: (62.281,-21.424,118.841)
C6: (61.156,-19.304,119.282)
C5: (61.099,-19.824,120.589)
C4: (61.613,-21.041,120.875)
P: (59.039,-19.746,126.414)
C4': (61.498,-22.551,125.310)
C2': (63.113,-22.409,123.562)
O2': (63.588,-23.741,123.548)
N1: (61.804,-20.201,118.450)
N2: (62.853,-22.151,117.875)
N3: (62.212,-21.905,120.058)
N7: (60.519,-19.288,121.707)
N9: (61.385,-21.225,122.207)
O5': (60.201,-20.564,125.726)
O3': (63.882,-22.390,125.882)
OP2: (58.693,-18.546,125.597)
C3': (62.867,-21.961,124.988)
C1': (61.713,-22.426,122.988)
C5': (60.670,-21.783,126.296)
O6: (60.689,-18.232,118.847)
O4': (60.804,-22.542,124.050)
C8: (60.706,-20.154,122.653)
C2: (62.281,-21.424,118.841)
C6: (61.156,-19.304,119.282)
C5: (61.099,-19.824,120.589)
C4: (61.613,-21.041,120.875)
P: (59.039,-19.746,126.414)
C4': (61.498,-22.551,125.310)
C2': (63.113,-22.409,123.562)
O2': (63.588,-23.741,123.548)
N1: (61.804,-20.201,118.450)
N2: (62.853,-22.151,117.875)
N3: (62.212,-21.905,120.058)
N7: (60.519,-19.288,121.707)
N9: (61.385,-21.225,122.207)
O5': (60.201,-20.564,125.726)
O3': (63.882,-22.390,125.882)
OP1: (69.038,-25.528,123.919)
OP2: (70.921,-25.060,122.304)
C3': (65.033,-26.125,121.261)
C1': (65.382,-24.939,119.277)
C5': (67.511,-26.623,121.625)
O4': (66.645,-25.186,119.874)
C8: (66.041,-26.901,117.742)
O2': (64.124,-23.921,121.024)
C6: (63.424,-27.161,115.442)
C5: (64.393,-26.944,116.434)
C4: (64.148,-25.892,117.309)
P: (69.498,-25.152,122.557)
C4': (66.458,-25.619,121.239)
C2': (64.326,-25.150,120.352)
C2: (62.258,-25.385,116.347)
N1: (62.355,-26.345,115.423)
N3: (63.102,-25.066,117.331)
N6: (63.509,-28.115,114.525)
N7: (65.605,-27.578,116.721)
N9: (65.204,-25.871,118.152)
O5': (68.823,-26.109,121.459)
O3': (64.507,-26.143,122.557)
OP2: (70.921,-25.060,122.304)
C3': (65.033,-26.125,121.261)
C1': (65.382,-24.939,119.277)
C5': (67.511,-26.623,121.625)
O4': (66.645,-25.186,119.874)
C8: (66.041,-26.901,117.742)
O2': (64.124,-23.921,121.024)
C6: (63.424,-27.161,115.442)
C5: (64.393,-26.944,116.434)
C4: (64.148,-25.892,117.309)
P: (69.498,-25.152,122.557)
C4': (66.458,-25.619,121.239)
C2': (64.326,-25.150,120.352)
C2: (62.258,-25.385,116.347)
N1: (62.355,-26.345,115.423)
N3: (63.102,-25.066,117.331)
N6: (63.509,-28.115,114.525)
N7: (65.605,-27.578,116.721)
N9: (65.204,-25.871,118.152)
O5': (68.823,-26.109,121.459)
O3': (64.507,-26.143,122.557)
Image (generated by PyMOL):