Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21298:21383
Extra
PDB:
ATOM 1 O3' U A1297 -95.325 -34.635 80.148 1.00 87.51 O
ATOM 2 P G A1298 -96.212 -33.525 80.887 1.00 89.42 P
ATOM 3 OP1 G A1298 -97.293 -33.161 79.969 1.00 89.83 O
ATOM 4 OP2 G A1298 -95.302 -32.468 81.346 1.00 88.80 O
ATOM 5 O5' G A1298 -96.796 -34.317 82.133 1.00 90.18 O
ATOM 6 C5' G A1298 -97.338 -33.627 83.239 1.00 90.64 C
ATOM 7 C4' G A1298 -97.274 -34.454 84.492 1.00 91.05 C
ATOM 8 O4' G A1298 -95.958 -35.041 84.638 1.00 90.42 O
ATOM 9 C3' G A1298 -97.493 -33.695 85.784 1.00 91.36 C
ATOM 10 O3' G A1298 -98.856 -33.508 86.064 1.00 92.24 O
ATOM 11 C2' G A1298 -96.788 -34.563 86.805 1.00 91.38 C
ATOM 12 O2' G A1298 -97.598 -35.670 87.154 1.00 92.19 O
ATOM 13 C1' G A1298 -95.595 -35.070 85.999 1.00 90.56 C
ATOM 14 N9 G A1298 -94.416 -34.203 86.180 1.00 89.74 N
ATOM 15 C8 G A1298 -93.929 -33.287 85.276 1.00 89.05 C
ATOM 16 N7 G A1298 -92.867 -32.663 85.718 1.00 88.43 N
ATOM 17 C5 G A1298 -92.648 -33.185 86.987 1.00 88.74 C
ATOM 18 C6 G A1298 -91.644 -32.883 87.942 1.00 88.38 C
ATOM 19 O6 G A1298 -90.735 -32.067 87.837 1.00 87.69 O
ATOM 20 N1 G A1298 -91.770 -33.644 89.101 1.00 88.93 N
ATOM 21 C2 G A1298 -92.768 -34.577 89.323 1.00 89.75 C
ATOM 22 N2 G A1298 -92.749 -35.225 90.504 1.00 90.24 N
ATOM 23 N3 G A1298 -93.717 -34.873 88.430 1.00 90.10 N
ATOM 24 C4 G A1298 -93.597 -34.140 87.291 1.00 89.55 C
ATOM 25 P C A1299 -99.337 -32.213 86.842 1.00 92.28 P
ATOM 26 OP1 C A1299 -100.797 -32.175 86.776 1.00 93.19 O
ATOM 27 OP2 C A1299 -98.580 -31.085 86.290 1.00 91.46 O
ATOM 28 O5' C A1299 -98.882 -32.525 88.321 1.00 92.44 O
TER
ATOM 1 O3' A B1382 -101.349 -37.823 93.287 1.00108.62 O
ATOM 2 P A B1383 -101.451 -39.280 92.634 1.00102.93 P
ATOM 3 OP1 A B1383 -102.884 -39.600 92.504 1.00103.89 O
ATOM 4 OP2 A B1383 -100.592 -40.168 93.445 1.00102.89 O
ATOM 5 O5' A B1383 -100.812 -39.094 91.200 1.00102.00 O
ATOM 6 C5' A B1383 -100.799 -37.836 90.562 1.00101.48 C
ATOM 7 C4' A B1383 -99.435 -37.534 89.995 1.00100.38 C
ATOM 8 O4' A B1383 -98.552 -37.082 91.055 1.00100.06 O
ATOM 9 C3' A B1383 -98.694 -38.711 89.370 1.00100.00 C
ATOM 10 O3' A B1383 -99.116 -38.985 88.045 1.00 99.93 O
ATOM 11 C2' A B1383 -97.234 -38.277 89.469 1.00 99.05 C
ATOM 12 O2' A B1383 -96.892 -37.405 88.404 1.00 98.32 O
ATOM 13 C1' A B1383 -97.226 -37.478 90.775 1.00 99.26 C
ATOM 14 N9 A B1383 -96.715 -38.284 91.893 1.00 99.52 N
ATOM 15 C8 A B1383 -97.329 -39.297 92.591 1.00100.37 C
ATOM 16 N7 A B1383 -96.562 -39.835 93.510 1.00100.38 N
ATOM 17 C5 A B1383 -95.362 -39.133 93.381 1.00 99.45 C
ATOM 18 C6 A B1383 -94.131 -39.206 94.054 1.00 99.00 C
ATOM 19 N6 A B1383 -93.892 -40.070 95.043 1.00 99.46 N
ATOM 20 N1 A B1383 -93.146 -38.368 93.693 1.00 98.10 N
ATOM 21 C2 A B1383 -93.389 -37.508 92.708 1.00 97.68 C
ATOM 22 N3 A B1383 -94.494 -37.333 92.002 1.00 98.02 N
ATOM 23 C4 A B1383 -95.448 -38.187 92.390 1.00 98.92 C
ATOM 24 P G B1384 -98.837 -40.424 87.376 1.00106.63 P
ATOM 25 OP1 G B1384 -98.936 -40.245 85.910 1.00106.22 O
ATOM 26 OP2 G B1384 -99.729 -41.402 88.039 1.00107.61 O
ATOM 27 O5' G B1384 -97.337 -40.721 87.770 1.00105.91 O
TER
ATOM 2 P G A1298 -96.212 -33.525 80.887 1.00 89.42 P
ATOM 3 OP1 G A1298 -97.293 -33.161 79.969 1.00 89.83 O
ATOM 4 OP2 G A1298 -95.302 -32.468 81.346 1.00 88.80 O
ATOM 5 O5' G A1298 -96.796 -34.317 82.133 1.00 90.18 O
ATOM 6 C5' G A1298 -97.338 -33.627 83.239 1.00 90.64 C
ATOM 7 C4' G A1298 -97.274 -34.454 84.492 1.00 91.05 C
ATOM 8 O4' G A1298 -95.958 -35.041 84.638 1.00 90.42 O
ATOM 9 C3' G A1298 -97.493 -33.695 85.784 1.00 91.36 C
ATOM 10 O3' G A1298 -98.856 -33.508 86.064 1.00 92.24 O
ATOM 11 C2' G A1298 -96.788 -34.563 86.805 1.00 91.38 C
ATOM 12 O2' G A1298 -97.598 -35.670 87.154 1.00 92.19 O
ATOM 13 C1' G A1298 -95.595 -35.070 85.999 1.00 90.56 C
ATOM 14 N9 G A1298 -94.416 -34.203 86.180 1.00 89.74 N
ATOM 15 C8 G A1298 -93.929 -33.287 85.276 1.00 89.05 C
ATOM 16 N7 G A1298 -92.867 -32.663 85.718 1.00 88.43 N
ATOM 17 C5 G A1298 -92.648 -33.185 86.987 1.00 88.74 C
ATOM 18 C6 G A1298 -91.644 -32.883 87.942 1.00 88.38 C
ATOM 19 O6 G A1298 -90.735 -32.067 87.837 1.00 87.69 O
ATOM 20 N1 G A1298 -91.770 -33.644 89.101 1.00 88.93 N
ATOM 21 C2 G A1298 -92.768 -34.577 89.323 1.00 89.75 C
ATOM 22 N2 G A1298 -92.749 -35.225 90.504 1.00 90.24 N
ATOM 23 N3 G A1298 -93.717 -34.873 88.430 1.00 90.10 N
ATOM 24 C4 G A1298 -93.597 -34.140 87.291 1.00 89.55 C
ATOM 25 P C A1299 -99.337 -32.213 86.842 1.00 92.28 P
ATOM 26 OP1 C A1299 -100.797 -32.175 86.776 1.00 93.19 O
ATOM 27 OP2 C A1299 -98.580 -31.085 86.290 1.00 91.46 O
ATOM 28 O5' C A1299 -98.882 -32.525 88.321 1.00 92.44 O
TER
ATOM 1 O3' A B1382 -101.349 -37.823 93.287 1.00108.62 O
ATOM 2 P A B1383 -101.451 -39.280 92.634 1.00102.93 P
ATOM 3 OP1 A B1383 -102.884 -39.600 92.504 1.00103.89 O
ATOM 4 OP2 A B1383 -100.592 -40.168 93.445 1.00102.89 O
ATOM 5 O5' A B1383 -100.812 -39.094 91.200 1.00102.00 O
ATOM 6 C5' A B1383 -100.799 -37.836 90.562 1.00101.48 C
ATOM 7 C4' A B1383 -99.435 -37.534 89.995 1.00100.38 C
ATOM 8 O4' A B1383 -98.552 -37.082 91.055 1.00100.06 O
ATOM 9 C3' A B1383 -98.694 -38.711 89.370 1.00100.00 C
ATOM 10 O3' A B1383 -99.116 -38.985 88.045 1.00 99.93 O
ATOM 11 C2' A B1383 -97.234 -38.277 89.469 1.00 99.05 C
ATOM 12 O2' A B1383 -96.892 -37.405 88.404 1.00 98.32 O
ATOM 13 C1' A B1383 -97.226 -37.478 90.775 1.00 99.26 C
ATOM 14 N9 A B1383 -96.715 -38.284 91.893 1.00 99.52 N
ATOM 15 C8 A B1383 -97.329 -39.297 92.591 1.00100.37 C
ATOM 16 N7 A B1383 -96.562 -39.835 93.510 1.00100.38 N
ATOM 17 C5 A B1383 -95.362 -39.133 93.381 1.00 99.45 C
ATOM 18 C6 A B1383 -94.131 -39.206 94.054 1.00 99.00 C
ATOM 19 N6 A B1383 -93.892 -40.070 95.043 1.00 99.46 N
ATOM 20 N1 A B1383 -93.146 -38.368 93.693 1.00 98.10 N
ATOM 21 C2 A B1383 -93.389 -37.508 92.708 1.00 97.68 C
ATOM 22 N3 A B1383 -94.494 -37.333 92.002 1.00 98.02 N
ATOM 23 C4 A B1383 -95.448 -38.187 92.390 1.00 98.92 C
ATOM 24 P G B1384 -98.837 -40.424 87.376 1.00106.63 P
ATOM 25 OP1 G B1384 -98.936 -40.245 85.910 1.00106.22 O
ATOM 26 OP2 G B1384 -99.729 -41.402 88.039 1.00107.61 O
ATOM 27 O5' G B1384 -97.337 -40.721 87.770 1.00105.91 O
TER
Atoms:
OP1: (-97.293,-33.161,79.969)
OP2: (-95.302,-32.468,81.346)
C3': (-97.493,-33.695,85.784)
C1': (-95.595,-35.070,85.999)
C5': (-97.338,-33.627,83.239)
O6: (-90.735,-32.067,87.837)
O4': (-95.958,-35.041,84.638)
C8: (-93.929,-33.287,85.276)
C2: (-92.768,-34.577,89.323)
C6: (-91.644,-32.883,87.942)
C5: (-92.648,-33.185,86.987)
C4: (-93.597,-34.140,87.291)
P: (-96.212,-33.525,80.887)
C4': (-97.274,-34.454,84.492)
C2': (-96.788,-34.563,86.805)
O2': (-97.598,-35.670,87.154)
N1: (-91.770,-33.644,89.101)
N2: (-92.749,-35.225,90.504)
N3: (-93.717,-34.873,88.430)
N7: (-92.867,-32.663,85.718)
N9: (-94.416,-34.203,86.180)
O5': (-96.796,-34.317,82.133)
O3': (-98.856,-33.508,86.064)
OP2: (-95.302,-32.468,81.346)
C3': (-97.493,-33.695,85.784)
C1': (-95.595,-35.070,85.999)
C5': (-97.338,-33.627,83.239)
O6: (-90.735,-32.067,87.837)
O4': (-95.958,-35.041,84.638)
C8: (-93.929,-33.287,85.276)
C2: (-92.768,-34.577,89.323)
C6: (-91.644,-32.883,87.942)
C5: (-92.648,-33.185,86.987)
C4: (-93.597,-34.140,87.291)
P: (-96.212,-33.525,80.887)
C4': (-97.274,-34.454,84.492)
C2': (-96.788,-34.563,86.805)
O2': (-97.598,-35.670,87.154)
N1: (-91.770,-33.644,89.101)
N2: (-92.749,-35.225,90.504)
N3: (-93.717,-34.873,88.430)
N7: (-92.867,-32.663,85.718)
N9: (-94.416,-34.203,86.180)
O5': (-96.796,-34.317,82.133)
O3': (-98.856,-33.508,86.064)
OP1: (-102.884,-39.600,92.504)
OP2: (-100.592,-40.168,93.445)
C3': (-98.694,-38.711,89.370)
C1': (-97.226,-37.478,90.775)
C5': (-100.799,-37.836,90.562)
O4': (-98.552,-37.082,91.055)
C8: (-97.329,-39.297,92.591)
O2': (-96.892,-37.405,88.404)
C6: (-94.131,-39.206,94.054)
C5: (-95.362,-39.133,93.381)
C4: (-95.448,-38.187,92.390)
P: (-101.451,-39.280,92.634)
C4': (-99.435,-37.534,89.995)
C2': (-97.234,-38.277,89.469)
C2: (-93.389,-37.508,92.708)
N1: (-93.146,-38.368,93.693)
N3: (-94.494,-37.333,92.002)
N6: (-93.892,-40.070,95.043)
N7: (-96.562,-39.835,93.510)
N9: (-96.715,-38.284,91.893)
O5': (-100.812,-39.094,91.200)
O3': (-99.116,-38.985,88.045)
OP2: (-100.592,-40.168,93.445)
C3': (-98.694,-38.711,89.370)
C1': (-97.226,-37.478,90.775)
C5': (-100.799,-37.836,90.562)
O4': (-98.552,-37.082,91.055)
C8: (-97.329,-39.297,92.591)
O2': (-96.892,-37.405,88.404)
C6: (-94.131,-39.206,94.054)
C5: (-95.362,-39.133,93.381)
C4: (-95.448,-38.187,92.390)
P: (-101.451,-39.280,92.634)
C4': (-99.435,-37.534,89.995)
C2': (-97.234,-38.277,89.469)
C2: (-93.389,-37.508,92.708)
N1: (-93.146,-38.368,93.693)
N3: (-94.494,-37.333,92.002)
N6: (-93.892,-40.070,95.043)
N7: (-96.562,-39.835,93.510)
N9: (-96.715,-38.284,91.893)
O5': (-100.812,-39.094,91.200)
O3': (-99.116,-38.985,88.045)
Image (generated by PyMOL):