Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A2439:A2025
Extra
PDB:
ATOM 1 O3' G A2438 -97.535 -65.707 -3.186 1.00 63.32 O
ATOM 2 P G A2439 -99.103 -65.571 -3.489 1.00 58.33 P
ATOM 3 OP1 G A2439 -99.407 -66.530 -4.572 1.00 49.48 O
ATOM 4 OP2 G A2439 -99.376 -64.113 -3.652 1.00 58.93 O
ATOM 5 O5' G A2439 -99.844 -66.077 -2.155 1.00 47.79 O
ATOM 6 C5' G A2439 -99.860 -67.439 -1.869 1.00 45.48 C
ATOM 7 C4' G A2439 -100.633 -67.655 -0.596 1.00 50.22 C
ATOM 8 O4' G A2439 -100.026 -66.889 0.457 1.00 51.17 O
ATOM 9 C3' G A2439 -102.065 -67.179 -0.635 1.00 61.51 C
ATOM 10 O3' G A2439 -102.851 -68.241 -1.094 1.00 58.83 O
ATOM 11 C2' G A2439 -102.354 -66.930 0.839 1.00 61.06 C
ATOM 12 O2' G A2439 -102.779 -68.097 1.508 1.00 59.78 O
ATOM 13 C1' G A2439 -101.003 -66.484 1.383 1.00 55.21 C
ATOM 14 N9 G A2439 -100.918 -65.041 1.444 1.00 57.70 N
ATOM 15 C8 G A2439 -100.197 -64.234 0.600 1.00 56.28 C
ATOM 16 N7 G A2439 -100.319 -62.972 0.886 1.00 58.30 N
ATOM 17 C5 G A2439 -101.177 -62.951 1.983 1.00 52.57 C
ATOM 18 C6 G A2439 -101.678 -61.858 2.725 1.00 61.00 C
ATOM 19 O6 G A2439 -101.452 -60.645 2.554 1.00 69.40 O
ATOM 20 N1 G A2439 -102.520 -62.282 3.750 1.00 58.11 N
ATOM 21 C2 G A2439 -102.841 -63.581 4.023 1.00 59.23 C
ATOM 22 N2 G A2439 -103.676 -63.772 5.054 1.00 64.58 N
ATOM 23 N3 G A2439 -102.378 -64.611 3.334 1.00 62.07 N
ATOM 24 C4 G A2439 -101.557 -64.218 2.336 1.00 52.61 C
ATOM 25 P C A2440 -103.987 -67.921 -2.136 1.00 50.33 P
ATOM 26 OP1 C A2440 -104.346 -69.183 -2.806 1.00 48.95 O
ATOM 27 OP2 C A2440 -103.553 -66.749 -2.934 1.00 57.48 O
ATOM 28 O5' C A2440 -105.186 -67.456 -1.185 1.00 64.44 O
TER
ATOM 1 O3' A B2024 -98.295 -74.206 5.429 1.00 41.71 O
ATOM 2 P A B2025 -98.604 -74.935 4.042 1.00 59.17 P
ATOM 3 OP1 A B2025 -99.998 -74.693 3.632 1.00 71.40 O
ATOM 4 OP2 A B2025 -98.078 -76.312 4.137 1.00 73.78 O
ATOM 5 O5' A B2025 -97.670 -74.118 3.057 1.00 70.62 O
ATOM 6 C5' A B2025 -97.607 -72.735 3.282 1.00 74.13 C
ATOM 7 C4' A B2025 -98.869 -72.097 2.750 1.00 53.62 C
ATOM 8 O4' A B2025 -99.941 -72.167 3.705 1.00 55.82 O
ATOM 9 C3' A B2025 -98.659 -70.626 2.514 1.00 54.20 C
ATOM 10 O3' A B2025 -98.286 -70.549 1.152 1.00 58.42 O
ATOM 11 C2' A B2025 -100.029 -70.012 2.798 1.00 69.82 C
ATOM 12 O2' A B2025 -100.671 -69.617 1.608 1.00 96.62 O
ATOM 13 C1' A B2025 -100.855 -71.136 3.409 1.00 60.00 C
ATOM 14 N9 A B2025 -101.613 -70.774 4.611 1.00 55.67 N
ATOM 15 C8 A B2025 -101.799 -71.560 5.713 1.00 70.31 C
ATOM 16 N7 A B2025 -102.519 -71.017 6.662 1.00 66.30 N
ATOM 17 C5 A B2025 -102.836 -69.778 6.149 1.00 60.16 C
ATOM 18 C6 A B2025 -103.587 -68.717 6.686 1.00 64.00 C
ATOM 19 N6 A B2025 -104.159 -68.770 7.895 1.00 55.05 N
ATOM 20 N1 A B2025 -103.720 -67.605 5.930 1.00 64.22 N
ATOM 21 C2 A B2025 -103.132 -67.586 4.725 1.00 69.71 C
ATOM 22 N3 A B2025 -102.404 -68.525 4.116 1.00 62.95 N
ATOM 23 C4 A B2025 -102.291 -69.610 4.889 1.00 54.59 C
ATOM 24 P G B2026 -96.794 -70.127 0.766 1.00 57.93 P
ATOM 25 OP1 G B2026 -96.210 -69.496 1.959 1.00 50.25 O
ATOM 26 OP2 G B2026 -96.897 -69.426 -0.529 1.00 61.56 O
ATOM 27 O5' G B2026 -95.985 -71.482 0.456 1.00 63.17 O
TER
ATOM 2 P G A2439 -99.103 -65.571 -3.489 1.00 58.33 P
ATOM 3 OP1 G A2439 -99.407 -66.530 -4.572 1.00 49.48 O
ATOM 4 OP2 G A2439 -99.376 -64.113 -3.652 1.00 58.93 O
ATOM 5 O5' G A2439 -99.844 -66.077 -2.155 1.00 47.79 O
ATOM 6 C5' G A2439 -99.860 -67.439 -1.869 1.00 45.48 C
ATOM 7 C4' G A2439 -100.633 -67.655 -0.596 1.00 50.22 C
ATOM 8 O4' G A2439 -100.026 -66.889 0.457 1.00 51.17 O
ATOM 9 C3' G A2439 -102.065 -67.179 -0.635 1.00 61.51 C
ATOM 10 O3' G A2439 -102.851 -68.241 -1.094 1.00 58.83 O
ATOM 11 C2' G A2439 -102.354 -66.930 0.839 1.00 61.06 C
ATOM 12 O2' G A2439 -102.779 -68.097 1.508 1.00 59.78 O
ATOM 13 C1' G A2439 -101.003 -66.484 1.383 1.00 55.21 C
ATOM 14 N9 G A2439 -100.918 -65.041 1.444 1.00 57.70 N
ATOM 15 C8 G A2439 -100.197 -64.234 0.600 1.00 56.28 C
ATOM 16 N7 G A2439 -100.319 -62.972 0.886 1.00 58.30 N
ATOM 17 C5 G A2439 -101.177 -62.951 1.983 1.00 52.57 C
ATOM 18 C6 G A2439 -101.678 -61.858 2.725 1.00 61.00 C
ATOM 19 O6 G A2439 -101.452 -60.645 2.554 1.00 69.40 O
ATOM 20 N1 G A2439 -102.520 -62.282 3.750 1.00 58.11 N
ATOM 21 C2 G A2439 -102.841 -63.581 4.023 1.00 59.23 C
ATOM 22 N2 G A2439 -103.676 -63.772 5.054 1.00 64.58 N
ATOM 23 N3 G A2439 -102.378 -64.611 3.334 1.00 62.07 N
ATOM 24 C4 G A2439 -101.557 -64.218 2.336 1.00 52.61 C
ATOM 25 P C A2440 -103.987 -67.921 -2.136 1.00 50.33 P
ATOM 26 OP1 C A2440 -104.346 -69.183 -2.806 1.00 48.95 O
ATOM 27 OP2 C A2440 -103.553 -66.749 -2.934 1.00 57.48 O
ATOM 28 O5' C A2440 -105.186 -67.456 -1.185 1.00 64.44 O
TER
ATOM 1 O3' A B2024 -98.295 -74.206 5.429 1.00 41.71 O
ATOM 2 P A B2025 -98.604 -74.935 4.042 1.00 59.17 P
ATOM 3 OP1 A B2025 -99.998 -74.693 3.632 1.00 71.40 O
ATOM 4 OP2 A B2025 -98.078 -76.312 4.137 1.00 73.78 O
ATOM 5 O5' A B2025 -97.670 -74.118 3.057 1.00 70.62 O
ATOM 6 C5' A B2025 -97.607 -72.735 3.282 1.00 74.13 C
ATOM 7 C4' A B2025 -98.869 -72.097 2.750 1.00 53.62 C
ATOM 8 O4' A B2025 -99.941 -72.167 3.705 1.00 55.82 O
ATOM 9 C3' A B2025 -98.659 -70.626 2.514 1.00 54.20 C
ATOM 10 O3' A B2025 -98.286 -70.549 1.152 1.00 58.42 O
ATOM 11 C2' A B2025 -100.029 -70.012 2.798 1.00 69.82 C
ATOM 12 O2' A B2025 -100.671 -69.617 1.608 1.00 96.62 O
ATOM 13 C1' A B2025 -100.855 -71.136 3.409 1.00 60.00 C
ATOM 14 N9 A B2025 -101.613 -70.774 4.611 1.00 55.67 N
ATOM 15 C8 A B2025 -101.799 -71.560 5.713 1.00 70.31 C
ATOM 16 N7 A B2025 -102.519 -71.017 6.662 1.00 66.30 N
ATOM 17 C5 A B2025 -102.836 -69.778 6.149 1.00 60.16 C
ATOM 18 C6 A B2025 -103.587 -68.717 6.686 1.00 64.00 C
ATOM 19 N6 A B2025 -104.159 -68.770 7.895 1.00 55.05 N
ATOM 20 N1 A B2025 -103.720 -67.605 5.930 1.00 64.22 N
ATOM 21 C2 A B2025 -103.132 -67.586 4.725 1.00 69.71 C
ATOM 22 N3 A B2025 -102.404 -68.525 4.116 1.00 62.95 N
ATOM 23 C4 A B2025 -102.291 -69.610 4.889 1.00 54.59 C
ATOM 24 P G B2026 -96.794 -70.127 0.766 1.00 57.93 P
ATOM 25 OP1 G B2026 -96.210 -69.496 1.959 1.00 50.25 O
ATOM 26 OP2 G B2026 -96.897 -69.426 -0.529 1.00 61.56 O
ATOM 27 O5' G B2026 -95.985 -71.482 0.456 1.00 63.17 O
TER
Atoms:
OP1: (-99.407,-66.530,-4.572)
OP2: (-99.376,-64.113,-3.652)
C3': (-102.065,-67.179,-0.635)
C1': (-101.003,-66.484,1.383)
C5': (-99.860,-67.439,-1.869)
O6: (-101.452,-60.645,2.554)
O4': (-100.026,-66.889,0.457)
C8: (-100.197,-64.234,0.600)
C2: (-102.841,-63.581,4.023)
C6: (-101.678,-61.858,2.725)
C5: (-101.177,-62.951,1.983)
C4: (-101.557,-64.218,2.336)
P: (-99.103,-65.571,-3.489)
C4': (-100.633,-67.655,-0.596)
C2': (-102.354,-66.930,0.839)
O2': (-102.779,-68.097,1.508)
N1: (-102.520,-62.282,3.750)
N2: (-103.676,-63.772,5.054)
N3: (-102.378,-64.611,3.334)
N7: (-100.319,-62.972,0.886)
N9: (-100.918,-65.041,1.444)
O5': (-99.844,-66.077,-2.155)
O3': (-102.851,-68.241,-1.094)
OP2: (-99.376,-64.113,-3.652)
C3': (-102.065,-67.179,-0.635)
C1': (-101.003,-66.484,1.383)
C5': (-99.860,-67.439,-1.869)
O6: (-101.452,-60.645,2.554)
O4': (-100.026,-66.889,0.457)
C8: (-100.197,-64.234,0.600)
C2: (-102.841,-63.581,4.023)
C6: (-101.678,-61.858,2.725)
C5: (-101.177,-62.951,1.983)
C4: (-101.557,-64.218,2.336)
P: (-99.103,-65.571,-3.489)
C4': (-100.633,-67.655,-0.596)
C2': (-102.354,-66.930,0.839)
O2': (-102.779,-68.097,1.508)
N1: (-102.520,-62.282,3.750)
N2: (-103.676,-63.772,5.054)
N3: (-102.378,-64.611,3.334)
N7: (-100.319,-62.972,0.886)
N9: (-100.918,-65.041,1.444)
O5': (-99.844,-66.077,-2.155)
O3': (-102.851,-68.241,-1.094)
OP1: (-99.998,-74.693,3.632)
OP2: (-98.078,-76.312,4.137)
C3': (-98.659,-70.626,2.514)
C1': (-100.855,-71.136,3.409)
C5': (-97.607,-72.735,3.282)
O4': (-99.941,-72.167,3.705)
C8: (-101.799,-71.560,5.713)
O2': (-100.671,-69.617,1.608)
C6: (-103.587,-68.717,6.686)
C5: (-102.836,-69.778,6.149)
C4: (-102.291,-69.610,4.889)
P: (-98.604,-74.935,4.042)
C4': (-98.869,-72.097,2.750)
C2': (-100.029,-70.012,2.798)
C2: (-103.132,-67.586,4.725)
N1: (-103.720,-67.605,5.930)
N3: (-102.404,-68.525,4.116)
N6: (-104.159,-68.770,7.895)
N7: (-102.519,-71.017,6.662)
N9: (-101.613,-70.774,4.611)
O5': (-97.670,-74.118,3.057)
O3': (-98.286,-70.549,1.152)
OP2: (-98.078,-76.312,4.137)
C3': (-98.659,-70.626,2.514)
C1': (-100.855,-71.136,3.409)
C5': (-97.607,-72.735,3.282)
O4': (-99.941,-72.167,3.705)
C8: (-101.799,-71.560,5.713)
O2': (-100.671,-69.617,1.608)
C6: (-103.587,-68.717,6.686)
C5: (-102.836,-69.778,6.149)
C4: (-102.291,-69.610,4.889)
P: (-98.604,-74.935,4.042)
C4': (-98.869,-72.097,2.750)
C2': (-100.029,-70.012,2.798)
C2: (-103.132,-67.586,4.725)
N1: (-103.720,-67.605,5.930)
N3: (-102.404,-68.525,4.116)
N6: (-104.159,-68.770,7.895)
N7: (-102.519,-71.017,6.662)
N9: (-101.613,-70.774,4.611)
O5': (-97.670,-74.118,3.057)
O3': (-98.286,-70.549,1.152)
Image (generated by PyMOL):