Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A2497:A1881
Extra
PDB:
ATOM 1 O3' C A2496 79.725 -21.781 -6.818 1.00 42.14 O
ATOM 2 P G A2497 80.632 -21.374 -8.070 1.00 37.95 P
ATOM 3 OP1 G A2497 80.479 -19.907 -8.260 1.00 41.26 O
ATOM 4 OP2 G A2497 80.312 -22.306 -9.180 1.00 46.58 O
ATOM 5 O5' G A2497 82.107 -21.722 -7.602 1.00 38.61 O
ATOM 6 C5' G A2497 82.706 -21.035 -6.514 1.00 46.10 C
ATOM 7 C4' G A2497 83.923 -21.782 -6.062 1.00 49.04 C
ATOM 8 O4' G A2497 83.501 -23.087 -5.588 1.00 53.60 O
ATOM 9 C3' G A2497 84.892 -22.087 -7.185 1.00 50.38 C
ATOM 10 O3' G A2497 85.792 -21.012 -7.380 1.00 48.75 O
ATOM 11 C2' G A2497 85.577 -23.365 -6.710 1.00 54.33 C
ATOM 12 O2' G A2497 86.608 -23.128 -5.777 1.00 54.80 O
ATOM 13 C1' G A2497 84.439 -24.077 -5.984 1.00 55.93 C
ATOM 14 N9 G A2497 83.775 -25.045 -6.851 1.00 52.66 N
ATOM 15 C8 G A2497 82.555 -24.906 -7.479 1.00 57.30 C
ATOM 16 N7 G A2497 82.245 -25.928 -8.226 1.00 57.47 N
ATOM 17 C5 G A2497 83.315 -26.801 -8.075 1.00 53.44 C
ATOM 18 C6 G A2497 83.543 -28.080 -8.647 1.00 51.78 C
ATOM 19 O6 G A2497 82.823 -28.704 -9.441 1.00 54.90 O
ATOM 20 N1 G A2497 84.753 -28.631 -8.220 1.00 50.63 N
ATOM 21 C2 G A2497 85.635 -28.025 -7.362 1.00 55.14 C
ATOM 22 N2 G A2497 86.738 -28.722 -7.077 1.00 46.49 N
ATOM 23 N3 G A2497 85.440 -26.822 -6.826 1.00 59.69 N
ATOM 24 C4 G A2497 84.265 -26.274 -7.223 1.00 52.12 C
ATOM 25 P U A2498 86.525 -20.840 -8.801 1.00 52.68 P
ATOM 26 OP1 U A2498 87.558 -19.778 -8.608 1.00 52.53 O
ATOM 27 OP2 U A2498 85.481 -20.672 -9.852 1.00 49.74 O
ATOM 28 O5' U A2498 87.224 -22.254 -9.059 1.00 50.73 O
TER
ATOM 1 O3' C B1880 95.032 -20.677 -3.331 1.00 42.12 O
ATOM 2 P A B1881 94.520 -20.329 -4.812 1.00 55.78 P
ATOM 3 OP1 A B1881 94.809 -21.524 -5.643 1.00 57.71 O
ATOM 4 OP2 A B1881 95.003 -18.986 -5.252 1.00 56.94 O
ATOM 5 O5' A B1881 92.950 -20.208 -4.629 1.00 50.40 O
ATOM 6 C5' A B1881 92.172 -19.498 -5.571 1.00 50.80 C
ATOM 7 C4' A B1881 90.811 -20.107 -5.642 1.00 45.85 C
ATOM 8 O4' A B1881 90.936 -21.491 -6.067 1.00 52.05 O
ATOM 9 C3' A B1881 90.095 -20.136 -4.311 1.00 43.46 C
ATOM 10 O3' A B1881 88.737 -19.862 -4.563 1.00 42.46 O
ATOM 11 C2' A B1881 90.265 -21.577 -3.831 1.00 46.11 C
ATOM 12 O2' A B1881 89.159 -21.972 -3.042 1.00 54.41 O
ATOM 13 C1' A B1881 90.269 -22.333 -5.153 1.00 47.81 C
ATOM 14 N9 A B1881 90.880 -23.671 -5.207 1.00 51.02 N
ATOM 15 C8 A B1881 92.210 -24.000 -5.271 1.00 51.86 C
ATOM 16 N7 A B1881 92.432 -25.290 -5.402 1.00 55.81 N
ATOM 17 C5 A B1881 91.159 -25.852 -5.408 1.00 55.87 C
ATOM 18 C6 A B1881 90.704 -27.193 -5.532 1.00 58.94 C
ATOM 19 N6 A B1881 91.506 -28.255 -5.686 1.00 53.55 N
ATOM 20 N1 A B1881 89.371 -27.404 -5.499 1.00 62.43 N
ATOM 21 C2 A B1881 88.560 -26.355 -5.346 1.00 56.69 C
ATOM 22 N3 A B1881 88.863 -25.062 -5.223 1.00 58.52 N
ATOM 23 C4 A B1881 90.194 -24.871 -5.266 1.00 54.91 C
ATOM 24 P C B1882 87.895 -19.030 -3.494 1.00 51.86 P
ATOM 25 OP1 C B1882 88.297 -17.599 -3.680 1.00 49.42 O
ATOM 26 OP2 C B1882 88.057 -19.691 -2.159 1.00 49.66 O
ATOM 27 O5' C B1882 86.380 -19.236 -3.964 1.00 56.30 O
TER
ATOM 2 P G A2497 80.632 -21.374 -8.070 1.00 37.95 P
ATOM 3 OP1 G A2497 80.479 -19.907 -8.260 1.00 41.26 O
ATOM 4 OP2 G A2497 80.312 -22.306 -9.180 1.00 46.58 O
ATOM 5 O5' G A2497 82.107 -21.722 -7.602 1.00 38.61 O
ATOM 6 C5' G A2497 82.706 -21.035 -6.514 1.00 46.10 C
ATOM 7 C4' G A2497 83.923 -21.782 -6.062 1.00 49.04 C
ATOM 8 O4' G A2497 83.501 -23.087 -5.588 1.00 53.60 O
ATOM 9 C3' G A2497 84.892 -22.087 -7.185 1.00 50.38 C
ATOM 10 O3' G A2497 85.792 -21.012 -7.380 1.00 48.75 O
ATOM 11 C2' G A2497 85.577 -23.365 -6.710 1.00 54.33 C
ATOM 12 O2' G A2497 86.608 -23.128 -5.777 1.00 54.80 O
ATOM 13 C1' G A2497 84.439 -24.077 -5.984 1.00 55.93 C
ATOM 14 N9 G A2497 83.775 -25.045 -6.851 1.00 52.66 N
ATOM 15 C8 G A2497 82.555 -24.906 -7.479 1.00 57.30 C
ATOM 16 N7 G A2497 82.245 -25.928 -8.226 1.00 57.47 N
ATOM 17 C5 G A2497 83.315 -26.801 -8.075 1.00 53.44 C
ATOM 18 C6 G A2497 83.543 -28.080 -8.647 1.00 51.78 C
ATOM 19 O6 G A2497 82.823 -28.704 -9.441 1.00 54.90 O
ATOM 20 N1 G A2497 84.753 -28.631 -8.220 1.00 50.63 N
ATOM 21 C2 G A2497 85.635 -28.025 -7.362 1.00 55.14 C
ATOM 22 N2 G A2497 86.738 -28.722 -7.077 1.00 46.49 N
ATOM 23 N3 G A2497 85.440 -26.822 -6.826 1.00 59.69 N
ATOM 24 C4 G A2497 84.265 -26.274 -7.223 1.00 52.12 C
ATOM 25 P U A2498 86.525 -20.840 -8.801 1.00 52.68 P
ATOM 26 OP1 U A2498 87.558 -19.778 -8.608 1.00 52.53 O
ATOM 27 OP2 U A2498 85.481 -20.672 -9.852 1.00 49.74 O
ATOM 28 O5' U A2498 87.224 -22.254 -9.059 1.00 50.73 O
TER
ATOM 1 O3' C B1880 95.032 -20.677 -3.331 1.00 42.12 O
ATOM 2 P A B1881 94.520 -20.329 -4.812 1.00 55.78 P
ATOM 3 OP1 A B1881 94.809 -21.524 -5.643 1.00 57.71 O
ATOM 4 OP2 A B1881 95.003 -18.986 -5.252 1.00 56.94 O
ATOM 5 O5' A B1881 92.950 -20.208 -4.629 1.00 50.40 O
ATOM 6 C5' A B1881 92.172 -19.498 -5.571 1.00 50.80 C
ATOM 7 C4' A B1881 90.811 -20.107 -5.642 1.00 45.85 C
ATOM 8 O4' A B1881 90.936 -21.491 -6.067 1.00 52.05 O
ATOM 9 C3' A B1881 90.095 -20.136 -4.311 1.00 43.46 C
ATOM 10 O3' A B1881 88.737 -19.862 -4.563 1.00 42.46 O
ATOM 11 C2' A B1881 90.265 -21.577 -3.831 1.00 46.11 C
ATOM 12 O2' A B1881 89.159 -21.972 -3.042 1.00 54.41 O
ATOM 13 C1' A B1881 90.269 -22.333 -5.153 1.00 47.81 C
ATOM 14 N9 A B1881 90.880 -23.671 -5.207 1.00 51.02 N
ATOM 15 C8 A B1881 92.210 -24.000 -5.271 1.00 51.86 C
ATOM 16 N7 A B1881 92.432 -25.290 -5.402 1.00 55.81 N
ATOM 17 C5 A B1881 91.159 -25.852 -5.408 1.00 55.87 C
ATOM 18 C6 A B1881 90.704 -27.193 -5.532 1.00 58.94 C
ATOM 19 N6 A B1881 91.506 -28.255 -5.686 1.00 53.55 N
ATOM 20 N1 A B1881 89.371 -27.404 -5.499 1.00 62.43 N
ATOM 21 C2 A B1881 88.560 -26.355 -5.346 1.00 56.69 C
ATOM 22 N3 A B1881 88.863 -25.062 -5.223 1.00 58.52 N
ATOM 23 C4 A B1881 90.194 -24.871 -5.266 1.00 54.91 C
ATOM 24 P C B1882 87.895 -19.030 -3.494 1.00 51.86 P
ATOM 25 OP1 C B1882 88.297 -17.599 -3.680 1.00 49.42 O
ATOM 26 OP2 C B1882 88.057 -19.691 -2.159 1.00 49.66 O
ATOM 27 O5' C B1882 86.380 -19.236 -3.964 1.00 56.30 O
TER
Atoms:
OP1: (80.479,-19.907,-8.260)
OP2: (80.312,-22.306,-9.180)
C3': (84.892,-22.087,-7.185)
C1': (84.439,-24.077,-5.984)
C5': (82.706,-21.035,-6.514)
O6: (82.823,-28.704,-9.441)
O4': (83.501,-23.087,-5.588)
C8: (82.555,-24.906,-7.479)
C2: (85.635,-28.025,-7.362)
C6: (83.543,-28.080,-8.647)
C5: (83.315,-26.801,-8.075)
C4: (84.265,-26.274,-7.223)
P: (80.632,-21.374,-8.070)
C4': (83.923,-21.782,-6.062)
C2': (85.577,-23.365,-6.710)
O2': (86.608,-23.128,-5.777)
N1: (84.753,-28.631,-8.220)
N2: (86.738,-28.722,-7.077)
N3: (85.440,-26.822,-6.826)
N7: (82.245,-25.928,-8.226)
N9: (83.775,-25.045,-6.851)
O5': (82.107,-21.722,-7.602)
O3': (85.792,-21.012,-7.380)
OP2: (80.312,-22.306,-9.180)
C3': (84.892,-22.087,-7.185)
C1': (84.439,-24.077,-5.984)
C5': (82.706,-21.035,-6.514)
O6: (82.823,-28.704,-9.441)
O4': (83.501,-23.087,-5.588)
C8: (82.555,-24.906,-7.479)
C2: (85.635,-28.025,-7.362)
C6: (83.543,-28.080,-8.647)
C5: (83.315,-26.801,-8.075)
C4: (84.265,-26.274,-7.223)
P: (80.632,-21.374,-8.070)
C4': (83.923,-21.782,-6.062)
C2': (85.577,-23.365,-6.710)
O2': (86.608,-23.128,-5.777)
N1: (84.753,-28.631,-8.220)
N2: (86.738,-28.722,-7.077)
N3: (85.440,-26.822,-6.826)
N7: (82.245,-25.928,-8.226)
N9: (83.775,-25.045,-6.851)
O5': (82.107,-21.722,-7.602)
O3': (85.792,-21.012,-7.380)
OP1: (94.809,-21.524,-5.643)
OP2: (95.003,-18.986,-5.252)
C3': (90.095,-20.136,-4.311)
C1': (90.269,-22.333,-5.153)
C5': (92.172,-19.498,-5.571)
O4': (90.936,-21.491,-6.067)
C8: (92.210,-24.000,-5.271)
O2': (89.159,-21.972,-3.042)
C6: (90.704,-27.193,-5.532)
C5: (91.159,-25.852,-5.408)
C4: (90.194,-24.871,-5.266)
P: (94.520,-20.329,-4.812)
C4': (90.811,-20.107,-5.642)
C2': (90.265,-21.577,-3.831)
C2: (88.560,-26.355,-5.346)
N1: (89.371,-27.404,-5.499)
N3: (88.863,-25.062,-5.223)
N6: (91.506,-28.255,-5.686)
N7: (92.432,-25.290,-5.402)
N9: (90.880,-23.671,-5.207)
O5': (92.950,-20.208,-4.629)
O3': (88.737,-19.862,-4.563)
OP2: (95.003,-18.986,-5.252)
C3': (90.095,-20.136,-4.311)
C1': (90.269,-22.333,-5.153)
C5': (92.172,-19.498,-5.571)
O4': (90.936,-21.491,-6.067)
C8: (92.210,-24.000,-5.271)
O2': (89.159,-21.972,-3.042)
C6: (90.704,-27.193,-5.532)
C5: (91.159,-25.852,-5.408)
C4: (90.194,-24.871,-5.266)
P: (94.520,-20.329,-4.812)
C4': (90.811,-20.107,-5.642)
C2': (90.265,-21.577,-3.831)
C2: (88.560,-26.355,-5.346)
N1: (89.371,-27.404,-5.499)
N3: (88.863,-25.062,-5.223)
N6: (91.506,-28.255,-5.686)
N7: (92.432,-25.290,-5.402)
N9: (90.880,-23.671,-5.207)
O5': (92.950,-20.208,-4.629)
O3': (88.737,-19.862,-4.563)
Image (generated by PyMOL):