ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OWW:A79:A32

Extra

PDB:
ATOM 1 O3' G A 78 6.596 -40.321 3.491 1.00 62.26 O
ATOM 2 P G A 79 5.497 -39.207 3.171 1.00 62.36 P
ATOM 3 OP1 G A 79 4.551 -39.780 2.184 1.00 63.36 O
ATOM 4 OP2 G A 79 6.204 -37.935 2.894 1.00 62.08 O
ATOM 5 O5' G A 79 4.762 -39.000 4.577 1.00 61.42 O
ATOM 6 C5' G A 79 3.889 -39.982 5.123 1.00 61.39 C
ATOM 7 C4' G A 79 3.534 -39.627 6.555 1.00 60.26 C
ATOM 8 O4' G A 79 4.733 -39.580 7.375 1.00 59.08 O
ATOM 9 C3' G A 79 2.902 -38.258 6.761 1.00 60.09 C
ATOM 10 O3' G A 79 1.518 -38.262 6.414 1.00 61.57 O
ATOM 11 C2' G A 79 3.156 -38.071 8.256 1.00 58.58 C
ATOM 12 O2' G A 79 2.318 -38.863 9.077 1.00 57.94 O
ATOM 13 C1' G A 79 4.597 -38.567 8.358 1.00 58.19 C
ATOM 14 N9 G A 79 5.585 -37.513 8.115 1.00 57.88 N
ATOM 15 C8 G A 79 6.121 -37.160 6.899 1.00 58.83 C
ATOM 16 N7 G A 79 6.973 -36.180 6.962 1.00 58.58 N
ATOM 17 C5 G A 79 7.007 -35.853 8.308 1.00 57.07 C
ATOM 18 C6 G A 79 7.762 -34.855 8.968 1.00 56.47 C
ATOM 19 O6 G A 79 8.560 -34.057 8.458 1.00 57.12 O
ATOM 20 N1 G A 79 7.519 -34.831 10.342 1.00 55.47 N
ATOM 21 C2 G A 79 6.648 -35.680 10.991 1.00 54.99 C
ATOM 22 N2 G A 79 6.546 -35.510 12.317 1.00 53.76 N
ATOM 23 N3 G A 79 5.931 -36.624 10.378 1.00 55.49 N
ATOM 24 C4 G A 79 6.157 -36.658 9.037 1.00 56.70 C
ATOM 25 P A A 80 1.004 -37.479 5.109 1.00 63.13 P
ATOM 26 OP1 A A 80 1.288 -38.319 3.924 1.00 64.77 O
ATOM 27 OP2 A A 80 1.531 -36.096 5.147 1.00 63.03 O
ATOM 28 O5' A A 80 -0.576 -37.407 5.349 1.00 62.88 O
TER

ATOM 1 O3' G B 31 -1.650 -42.053 15.515 1.00 51.21 O
ATOM 2 P A B 32 -3.081 -41.358 15.393 1.00 51.20 P
ATOM 3 OP1 A B 32 -3.120 -40.240 16.361 1.00 51.04 O
ATOM 4 OP2 A B 32 -4.107 -42.426 15.463 1.00 51.46 O
ATOM 5 O5' A B 32 -3.057 -40.719 13.924 1.00 52.58 O
ATOM 6 C5' A B 32 -3.340 -41.520 12.771 1.00 54.44 C
ATOM 7 C4' A B 32 -2.289 -41.333 11.686 1.00 55.68 C
ATOM 8 O4' A B 32 -1.851 -39.952 11.635 1.00 55.64 O
ATOM 9 C3' A B 32 -1.013 -42.155 11.830 1.00 56.36 C
ATOM 10 O3' A B 32 -0.477 -42.396 10.545 1.00 57.90 O
ATOM 11 C2' A B 32 -0.083 -41.196 12.556 1.00 55.86 C
ATOM 12 O2' A B 32 1.284 -41.513 12.342 1.00 56.33 O
ATOM 13 C1' A B 32 -0.461 -39.876 11.880 1.00 55.90 C
ATOM 14 N9 A B 32 -0.213 -38.684 12.687 1.00 55.70 N
ATOM 15 C8 A B 32 -0.880 -38.308 13.821 1.00 55.09 C
ATOM 16 N7 A B 32 -0.449 -37.187 14.346 1.00 54.77 N
ATOM 17 C5 A B 32 0.574 -36.797 13.501 1.00 55.09 C
ATOM 18 C6 A B 32 1.440 -35.682 13.510 1.00 54.72 C
ATOM 19 N6 A B 32 1.397 -34.725 14.442 1.00 54.11 N
ATOM 20 N1 A B 32 2.352 -35.587 12.518 1.00 54.90 N
ATOM 21 C2 A B 32 2.393 -36.547 11.581 1.00 55.68 C
ATOM 22 N3 A B 32 1.633 -37.639 11.468 1.00 55.92 N
ATOM 23 C4 A B 32 0.734 -37.707 12.467 1.00 55.72 C
ATOM 24 P A B 33 -0.811 -43.689 9.673 1.00 59.44 P
ATOM 25 OP1 A B 33 -2.273 -43.751 9.450 1.00 59.25 O
ATOM 26 OP2 A B 33 -0.090 -44.837 10.264 1.00 59.83 O
ATOM 27 O5' A B 33 -0.088 -43.315 8.297 1.00 61.22 O
TER

Atoms:
OP1: (4.551,-39.780,2.184)
OP2: (6.204,-37.935,2.894)
C3': (2.902,-38.258,6.761)
C1': (4.597,-38.567,8.358)
C5': (3.889,-39.982,5.123)
O6: (8.560,-34.057,8.458)
O4': (4.733,-39.580,7.375)
C8: (6.121,-37.160,6.899)
C2: (6.648,-35.680,10.991)
C6: (7.762,-34.855,8.968)
C5: (7.007,-35.853,8.308)
C4: (6.157,-36.658,9.037)
P: (5.497,-39.207,3.171)
C4': (3.534,-39.627,6.555)
C2': (3.156,-38.071,8.256)
O2': (2.318,-38.863,9.077)
N1: (7.519,-34.831,10.342)
N2: (6.546,-35.510,12.317)
N3: (5.931,-36.624,10.378)
N7: (6.973,-36.180,6.962)
N9: (5.585,-37.513,8.115)
O5': (4.762,-39.000,4.577)
O3': (1.518,-38.262,6.414)
OP1: (-3.120,-40.240,16.361)
OP2: (-4.107,-42.426,15.463)
C3': (-1.013,-42.155,11.830)
C1': (-0.461,-39.876,11.880)
C5': (-3.340,-41.520,12.771)
O4': (-1.851,-39.952,11.635)
C8: (-0.880,-38.308,13.821)
O2': (1.284,-41.513,12.342)
C6: (1.440,-35.682,13.510)
C5: (0.574,-36.797,13.501)
C4: (0.734,-37.707,12.467)
P: (-3.081,-41.358,15.393)
C4': (-2.289,-41.333,11.686)
C2': (-0.083,-41.196,12.556)
C2: (2.393,-36.547,11.581)
N1: (2.352,-35.587,12.518)
N3: (1.633,-37.639,11.468)
N6: (1.397,-34.725,14.442)
N7: (-0.449,-37.187,14.346)
N9: (-0.213,-38.684,12.687)
O5': (-3.057,-40.719,13.924)
O3': (-0.477,-42.396,10.545)
Image (generated by PyMOL):
PyMOL image
show in jmol