Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A988:A1001
Extra
PDB:
ATOM 1 O3' C A 987 -119.060 -89.021 9.123 1.00 21.28 O
ATOM 2 P G A 988 -119.222 -89.524 10.637 1.00 43.34 P
ATOM 3 OP1 G A 988 -120.645 -89.918 10.812 1.00 71.18 O
ATOM 4 OP2 G A 988 -118.620 -88.518 11.555 1.00 71.12 O
ATOM 5 O5' G A 988 -118.310 -90.825 10.658 1.00 0.79 O
ATOM 6 C5' G A 988 -118.553 -91.875 9.723 1.00 0.79 C
ATOM 7 C4' G A 988 -117.685 -93.067 10.024 1.00 0.79 C
ATOM 8 O4' G A 988 -116.374 -92.898 9.441 1.00 0.79 O
ATOM 9 C3' G A 988 -117.433 -93.364 11.490 1.00 0.79 C
ATOM 10 O3' G A 988 -118.504 -94.089 12.068 1.00 0.79 O
ATOM 11 C2' G A 988 -116.153 -94.185 11.438 1.00 0.79 C
ATOM 12 O2' G A 988 -116.398 -95.553 11.188 1.00 0.79 O
ATOM 13 C1' G A 988 -115.413 -93.548 10.254 1.00 0.79 C
ATOM 14 N9 G A 988 -114.453 -92.554 10.714 1.00 51.96 N
ATOM 15 C8 G A 988 -114.642 -91.199 10.806 1.00 51.87 C
ATOM 16 N7 G A 988 -113.636 -90.580 11.354 1.00 51.80 N
ATOM 17 C5 G A 988 -112.721 -91.587 11.620 1.00 51.76 C
ATOM 18 C6 G A 988 -111.452 -91.528 12.234 1.00 51.75 C
ATOM 19 O6 G A 988 -110.866 -90.545 12.696 1.00 51.77 O
ATOM 20 N1 G A 988 -110.856 -92.778 12.290 1.00 51.77 N
ATOM 21 C2 G A 988 -111.413 -93.930 11.823 1.00 51.74 C
ATOM 22 N2 G A 988 -110.671 -95.025 11.950 1.00 51.80 N
ATOM 23 N3 G A 988 -112.604 -94.004 11.268 1.00 51.66 N
ATOM 24 C4 G A 988 -113.198 -92.803 11.199 1.00 51.78 C
ATOM 25 P A A 989 -118.815 -93.923 13.629 1.00 4.08 P
ATOM 26 OP1 A A 989 -119.911 -94.864 13.979 1.00 63.44 O
ATOM 27 OP2 A A 989 -118.975 -92.470 13.904 1.00 63.47 O
ATOM 28 O5' A A 989 -117.471 -94.419 14.329 1.00 22.82 O
TER
ATOM 1 O3' U B1000 -121.206-103.451 7.716 1.00 34.20 O
ATOM 2 P A B1001 -121.112-102.102 6.894 1.00 41.73 P
ATOM 3 OP1 A B1001 -122.469-101.617 6.611 1.00 0.79 O
ATOM 4 OP2 A B1001 -120.136-102.285 5.782 1.00 0.79 O
ATOM 5 O5' A B1001 -120.482-101.097 7.936 1.00 31.47 O
ATOM 6 C5' A B1001 -120.038 -99.847 7.474 1.00 31.47 C
ATOM 7 C4' A B1001 -119.768 -98.913 8.608 1.00 31.47 C
ATOM 8 O4' A B1001 -118.691 -99.424 9.426 1.00 31.47 O
ATOM 9 C3' A B1001 -119.268 -97.612 8.031 1.00 31.47 C
ATOM 10 O3' A B1001 -120.416 -96.822 7.775 1.00 31.47 O
ATOM 11 C2' A B1001 -118.309 -97.107 9.098 1.00 31.47 C
ATOM 12 O2' A B1001 -119.007 -96.497 10.166 1.00 31.47 O
ATOM 13 C1' A B1001 -117.713 -98.424 9.608 1.00 31.47 C
ATOM 14 N9 A B1001 -116.501 -98.903 8.938 1.00 21.10 N
ATOM 15 C8 A B1001 -116.405-100.002 8.115 1.00 21.04 C
ATOM 16 N7 A B1001 -115.186-100.253 7.703 1.00 21.01 N
ATOM 17 C5 A B1001 -114.431 -99.246 8.275 1.00 20.99 C
ATOM 18 C6 A B1001 -113.065 -98.961 8.226 1.00 21.00 C
ATOM 19 N6 A B1001 -112.182 -99.702 7.555 1.00 20.99 N
ATOM 20 N1 A B1001 -112.625 -97.880 8.899 1.00 21.09 N
ATOM 21 C2 A B1001 -113.513 -97.147 9.577 1.00 21.19 C
ATOM 22 N3 A B1001 -114.826 -97.315 9.707 1.00 21.23 N
ATOM 23 C4 A B1001 -115.229 -98.395 9.023 1.00 21.10 C
ATOM 24 P A B1002 -121.008 -96.741 6.277 1.00 34.01 P
ATOM 25 OP1 A B1002 -122.412 -96.255 6.395 1.00 40.76 O
ATOM 26 OP2 A B1002 -120.728 -97.978 5.509 1.00 40.91 O
ATOM 27 O5' A B1002 -120.136 -95.578 5.632 1.00 32.21 O
TER
ATOM 2 P G A 988 -119.222 -89.524 10.637 1.00 43.34 P
ATOM 3 OP1 G A 988 -120.645 -89.918 10.812 1.00 71.18 O
ATOM 4 OP2 G A 988 -118.620 -88.518 11.555 1.00 71.12 O
ATOM 5 O5' G A 988 -118.310 -90.825 10.658 1.00 0.79 O
ATOM 6 C5' G A 988 -118.553 -91.875 9.723 1.00 0.79 C
ATOM 7 C4' G A 988 -117.685 -93.067 10.024 1.00 0.79 C
ATOM 8 O4' G A 988 -116.374 -92.898 9.441 1.00 0.79 O
ATOM 9 C3' G A 988 -117.433 -93.364 11.490 1.00 0.79 C
ATOM 10 O3' G A 988 -118.504 -94.089 12.068 1.00 0.79 O
ATOM 11 C2' G A 988 -116.153 -94.185 11.438 1.00 0.79 C
ATOM 12 O2' G A 988 -116.398 -95.553 11.188 1.00 0.79 O
ATOM 13 C1' G A 988 -115.413 -93.548 10.254 1.00 0.79 C
ATOM 14 N9 G A 988 -114.453 -92.554 10.714 1.00 51.96 N
ATOM 15 C8 G A 988 -114.642 -91.199 10.806 1.00 51.87 C
ATOM 16 N7 G A 988 -113.636 -90.580 11.354 1.00 51.80 N
ATOM 17 C5 G A 988 -112.721 -91.587 11.620 1.00 51.76 C
ATOM 18 C6 G A 988 -111.452 -91.528 12.234 1.00 51.75 C
ATOM 19 O6 G A 988 -110.866 -90.545 12.696 1.00 51.77 O
ATOM 20 N1 G A 988 -110.856 -92.778 12.290 1.00 51.77 N
ATOM 21 C2 G A 988 -111.413 -93.930 11.823 1.00 51.74 C
ATOM 22 N2 G A 988 -110.671 -95.025 11.950 1.00 51.80 N
ATOM 23 N3 G A 988 -112.604 -94.004 11.268 1.00 51.66 N
ATOM 24 C4 G A 988 -113.198 -92.803 11.199 1.00 51.78 C
ATOM 25 P A A 989 -118.815 -93.923 13.629 1.00 4.08 P
ATOM 26 OP1 A A 989 -119.911 -94.864 13.979 1.00 63.44 O
ATOM 27 OP2 A A 989 -118.975 -92.470 13.904 1.00 63.47 O
ATOM 28 O5' A A 989 -117.471 -94.419 14.329 1.00 22.82 O
TER
ATOM 1 O3' U B1000 -121.206-103.451 7.716 1.00 34.20 O
ATOM 2 P A B1001 -121.112-102.102 6.894 1.00 41.73 P
ATOM 3 OP1 A B1001 -122.469-101.617 6.611 1.00 0.79 O
ATOM 4 OP2 A B1001 -120.136-102.285 5.782 1.00 0.79 O
ATOM 5 O5' A B1001 -120.482-101.097 7.936 1.00 31.47 O
ATOM 6 C5' A B1001 -120.038 -99.847 7.474 1.00 31.47 C
ATOM 7 C4' A B1001 -119.768 -98.913 8.608 1.00 31.47 C
ATOM 8 O4' A B1001 -118.691 -99.424 9.426 1.00 31.47 O
ATOM 9 C3' A B1001 -119.268 -97.612 8.031 1.00 31.47 C
ATOM 10 O3' A B1001 -120.416 -96.822 7.775 1.00 31.47 O
ATOM 11 C2' A B1001 -118.309 -97.107 9.098 1.00 31.47 C
ATOM 12 O2' A B1001 -119.007 -96.497 10.166 1.00 31.47 O
ATOM 13 C1' A B1001 -117.713 -98.424 9.608 1.00 31.47 C
ATOM 14 N9 A B1001 -116.501 -98.903 8.938 1.00 21.10 N
ATOM 15 C8 A B1001 -116.405-100.002 8.115 1.00 21.04 C
ATOM 16 N7 A B1001 -115.186-100.253 7.703 1.00 21.01 N
ATOM 17 C5 A B1001 -114.431 -99.246 8.275 1.00 20.99 C
ATOM 18 C6 A B1001 -113.065 -98.961 8.226 1.00 21.00 C
ATOM 19 N6 A B1001 -112.182 -99.702 7.555 1.00 20.99 N
ATOM 20 N1 A B1001 -112.625 -97.880 8.899 1.00 21.09 N
ATOM 21 C2 A B1001 -113.513 -97.147 9.577 1.00 21.19 C
ATOM 22 N3 A B1001 -114.826 -97.315 9.707 1.00 21.23 N
ATOM 23 C4 A B1001 -115.229 -98.395 9.023 1.00 21.10 C
ATOM 24 P A B1002 -121.008 -96.741 6.277 1.00 34.01 P
ATOM 25 OP1 A B1002 -122.412 -96.255 6.395 1.00 40.76 O
ATOM 26 OP2 A B1002 -120.728 -97.978 5.509 1.00 40.91 O
ATOM 27 O5' A B1002 -120.136 -95.578 5.632 1.00 32.21 O
TER
Atoms:
OP1: (-120.645,-89.918,10.812)
OP2: (-118.620,-88.518,11.555)
C3': (-117.433,-93.364,11.490)
C1': (-115.413,-93.548,10.254)
C5': (-118.553,-91.875,9.723)
O6: (-110.866,-90.545,12.696)
O4': (-116.374,-92.898,9.441)
C8: (-114.642,-91.199,10.806)
C2: (-111.413,-93.930,11.823)
C6: (-111.452,-91.528,12.234)
C5: (-112.721,-91.587,11.620)
C4: (-113.198,-92.803,11.199)
P: (-119.222,-89.524,10.637)
C4': (-117.685,-93.067,10.024)
C2': (-116.153,-94.185,11.438)
O2': (-116.398,-95.553,11.188)
N1: (-110.856,-92.778,12.290)
N2: (-110.671,-95.025,11.950)
N3: (-112.604,-94.004,11.268)
N7: (-113.636,-90.580,11.354)
N9: (-114.453,-92.554,10.714)
O5': (-118.310,-90.825,10.658)
O3': (-118.504,-94.089,12.068)
OP2: (-118.620,-88.518,11.555)
C3': (-117.433,-93.364,11.490)
C1': (-115.413,-93.548,10.254)
C5': (-118.553,-91.875,9.723)
O6: (-110.866,-90.545,12.696)
O4': (-116.374,-92.898,9.441)
C8: (-114.642,-91.199,10.806)
C2: (-111.413,-93.930,11.823)
C6: (-111.452,-91.528,12.234)
C5: (-112.721,-91.587,11.620)
C4: (-113.198,-92.803,11.199)
P: (-119.222,-89.524,10.637)
C4': (-117.685,-93.067,10.024)
C2': (-116.153,-94.185,11.438)
O2': (-116.398,-95.553,11.188)
N1: (-110.856,-92.778,12.290)
N2: (-110.671,-95.025,11.950)
N3: (-112.604,-94.004,11.268)
N7: (-113.636,-90.580,11.354)
N9: (-114.453,-92.554,10.714)
O5': (-118.310,-90.825,10.658)
O3': (-118.504,-94.089,12.068)
OP1: (-122.469,-101.617,6.611)
OP2: (-120.136,-102.285,5.782)
C3': (-119.268,-97.612,8.031)
C1': (-117.713,-98.424,9.608)
C5': (-120.038,-99.847,7.474)
O4': (-118.691,-99.424,9.426)
C8: (-116.405,-100.002,8.115)
O2': (-119.007,-96.497,10.166)
C6: (-113.065,-98.961,8.226)
C5: (-114.431,-99.246,8.275)
C4: (-115.229,-98.395,9.023)
P: (-121.112,-102.102,6.894)
C4': (-119.768,-98.913,8.608)
C2': (-118.309,-97.107,9.098)
C2: (-113.513,-97.147,9.577)
N1: (-112.625,-97.880,8.899)
N3: (-114.826,-97.315,9.707)
N6: (-112.182,-99.702,7.555)
N7: (-115.186,-100.253,7.703)
N9: (-116.501,-98.903,8.938)
O5': (-120.482,-101.097,7.936)
O3': (-120.416,-96.822,7.775)
OP2: (-120.136,-102.285,5.782)
C3': (-119.268,-97.612,8.031)
C1': (-117.713,-98.424,9.608)
C5': (-120.038,-99.847,7.474)
O4': (-118.691,-99.424,9.426)
C8: (-116.405,-100.002,8.115)
O2': (-119.007,-96.497,10.166)
C6: (-113.065,-98.961,8.226)
C5: (-114.431,-99.246,8.275)
C4: (-115.229,-98.395,9.023)
P: (-121.112,-102.102,6.894)
C4': (-119.768,-98.913,8.608)
C2': (-118.309,-97.107,9.098)
C2: (-113.513,-97.147,9.577)
N1: (-112.625,-97.880,8.899)
N3: (-114.826,-97.315,9.707)
N6: (-112.182,-99.702,7.555)
N7: (-115.186,-100.253,7.703)
N9: (-116.501,-98.903,8.938)
O5': (-120.482,-101.097,7.936)
O3': (-120.416,-96.822,7.775)
Image (generated by PyMOL):